RNA–Protein interactions for RNA: ENST00000425451.2

HDAC7-208, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 621 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-208ENST00000425451 CAPNS2Q96L46 248 aa23■■□□□ 1.27
HDAC7-208ENST00000425451 TRIM35Q9UPQ4 493 aa23■■□□□ 1.27
HDAC7-208ENST00000425451 SH3TC1Q8TE82 1336 aa23■■□□□ 1.27
HDAC7-208ENST00000425451 THSD7BQ9C0I4 1608 aa23■■□□□ 1.27
HDAC7-208ENST00000425451 GRAPQ13588 217 aa22.99■■□□□ 1.27
HDAC7-208ENST00000425451 CYP4F22Q6NT55 531 aa22.99■■□□□ 1.27
HDAC7-208ENST00000425451 DDX46Q7L014 1031 aaKnown RBP22.99■■□□□ 1.27
HDAC7-208ENST00000425451 GRAPLQ8TC17 118 aaPredicted RBP22.99■■□□□ 1.27
HDAC7-208ENST00000425451 ZNF428Q96B54 188 aa22.99■■□□□ 1.27
HDAC7-208ENST00000425451 CHPF2Q9P2E5 772 aa22.99■■□□□ 1.27
HDAC7-208ENST00000425451 PGAP2Q9UHJ9 254 aa22.99■■□□□ 1.27
HDAC7-208ENST00000425451 TLL2Q9Y6L7 1015 aa22.99■■□□□ 1.27
HDAC7-208ENST00000425451 TAF1P21675 1872 aa22.98■■□□□ 1.27
HDAC7-208ENST00000425451 TRPM7Q96QT4 1865 aa22.98■■□□□ 1.27
HDAC7-208ENST00000425451 CIAPIN1Q6FI81 312 aa22.98■■□□□ 1.27
HDAC7-208ENST00000425451 DUOX1Q9NRD9 1551 aa22.97■■□□□ 1.27
HDAC7-208ENST00000425451 RAD17O75943 681 aa22.97■■□□□ 1.27
HDAC7-208ENST00000425451 HIRAP54198 1017 aaPredicted RBP22.97■■□□□ 1.27
HDAC7-208ENST00000425451 YDJCA8MPS7 323 aa22.96■■□□□ 1.27
HDAC7-208ENST00000425451 ECE1P42892 770 aa22.96■■□□□ 1.27
HDAC7-208ENST00000425451 PLBD2Q8NHP8 589 aa22.96■■□□□ 1.27
HDAC7-208ENST00000425451 GPR101Q96P66 508 aaPredicted RBP22.96■■□□□ 1.27
HDAC7-208ENST00000425451 LAS1LQ9Y4W2 734 aaKnown RBP22.96■■□□□ 1.27
HDAC7-208ENST00000425451 CDHR2Q9BYE9 1310 aa22.96■■□□□ 1.27
HDAC7-208ENST00000425451 PAXIP1Q6ZW49 1069 aaPredicted RBP22.95■■□□□ 1.26
HDAC7-208ENST00000425451 RUNDC1Q96C34 613 aa22.95■■□□□ 1.26
HDAC7-208ENST00000425451 MYBBP1AQ9BQG0 1328 aaKnown RBP22.95■■□□□ 1.26
HDAC7-208ENST00000425451 ISCA1Q9BUE6 129 aa22.95■■□□□ 1.26
HDAC7-208ENST00000425451 GLIS2Q9BZE0 524 aaPredicted RBP22.95■■□□□ 1.26
HDAC7-208ENST00000425451 LRRC37AA6NMS7 1700 aa22.94■■□□□ 1.26
HDAC7-208ENST00000425451 DDX60Q8IY21 1712 aaKnown RBP22.94■■□□□ 1.26
HDAC7-208ENST00000425451 GRM1Q13255 1194 aa22.94■■□□□ 1.26
HDAC7-208ENST00000425451 TNIP1Q15025 636 aa22.94■■□□□ 1.26
HDAC7-208ENST00000425451 HDGFL1Q5TGJ6 251 aa22.94■■□□□ 1.26
HDAC7-208ENST00000425451 ANKRD13DQ6ZTN6 518 aa22.94■■□□□ 1.26
HDAC7-208ENST00000425451 TMC4Q7Z404 712 aa22.94■■□□□ 1.26
HDAC7-208ENST00000425451 SAPCD2Q86UD0 394 aa22.94■■□□□ 1.26
HDAC7-208ENST00000425451 SHTN1A0MZ66 631 aa22.93■■□□□ 1.26
HDAC7-208ENST00000425451 HOXB7P09629 217 aa22.93■■□□□ 1.26
HDAC7-208ENST00000425451 TRPM4Q8TD43 1214 aa22.93■■□□□ 1.26
HDAC7-208ENST00000425451 ZC3H15Q8WU90 426 aaKnown RBP22.93■■□□□ 1.26
HDAC7-208ENST00000425451 FAM89AQ96GI7 184 aa22.93■■□□□ 1.26
HDAC7-208ENST00000425451 BCL2L13Q9BXK5 485 aa22.93■■□□□ 1.26
HDAC7-208ENST00000425451 COL4A1P02462 1669 aa22.93■■□□□ 1.26
HDAC7-208ENST00000425451 ATP5J2-PTCD1G3V325 749 aa22.92■■□□□ 1.26
HDAC7-208ENST00000425451 AOC2O75106 756 aa22.92■■□□□ 1.26
HDAC7-208ENST00000425451 CELF2O95319 508 aaKnown RBP22.92■■□□□ 1.26
HDAC7-208ENST00000425451 SF3B3Q15393 1217 aaKnown RBP22.92■■□□□ 1.26
HDAC7-208ENST00000425451 CELF1Q92879 486 aaKnown RBP22.92■■□□□ 1.26
HDAC7-208ENST00000425451 DBF4Q9UBU7 674 aaPredicted RBP22.92■■□□□ 1.26
HDAC7-208ENST00000425451 CNOT7Q9UIV1 285 aaKnown RBP22.92■■□□□ 1.26
HDAC7-208ENST00000425451 MAP2K2P36507 400 aa22.91■■□□□ 1.26
HDAC7-208ENST00000425451 DDX10Q13206 875 aaKnown RBP22.91■■□□□ 1.26
HDAC7-208ENST00000425451 ABHD8Q96I13 439 aa22.91■■□□□ 1.26
HDAC7-208ENST00000425451 ADAMTS8Q9UP79 889 aa22.91■■□□□ 1.26
HDAC7-208ENST00000425451 TRIM28Q13263 835 aaKnown RBP22.89■■□□□ 1.25
HDAC7-208ENST00000425451 WASHC4Q2M389 1173 aa22.89■■□□□ 1.25
HDAC7-208ENST00000425451 DUSP27Q5VZP5 1158 aa22.89■■□□□ 1.25
HDAC7-208ENST00000425451 CDC37L1Q7L3B6 337 aa22.89■■□□□ 1.25
HDAC7-208ENST00000425451 HHIPL1Q96JK4 782 aa22.89■■□□□ 1.25
HDAC7-208ENST00000425451 CFAP44Q96MT7 982 aa22.89■■□□□ 1.25
HDAC7-208ENST00000425451 POLLQ9UGP5 575 aa22.89■■□□□ 1.25
HDAC7-208ENST00000425451 NSFL1CQ9UNZ2 370 aaKnown RBP22.89■■□□□ 1.25
HDAC7-208ENST00000425451 ZBTB12Q9Y330 459 aaPredicted RBP22.89■■□□□ 1.25
HDAC7-208ENST00000425451 GPSM2P81274 684 aa22.88■■□□□ 1.25
HDAC7-208ENST00000425451 MICALL2Q8IY33 904 aa22.88■■□□□ 1.25
HDAC7-208ENST00000425451 BEGAINQ9BUH8 593 aa22.88■■□□□ 1.25
HDAC7-208ENST00000425451 HYPKQ9NX55 129 aa22.88■■□□□ 1.25
HDAC7-208ENST00000425451 H7C1D1 291 aa22.87■■□□□ 1.25
HDAC7-208ENST00000425451 PSMD14O00487 310 aa22.87■■□□□ 1.25
HDAC7-208ENST00000425451 WDR43Q15061 677 aaKnown RBP eCLIP22.87■■□□□ 1.25
HDAC7-208ENST00000425451 RTL5Q5HYW3 569 aaPredicted RBP22.87■■□□□ 1.25
HDAC7-208ENST00000425451 DPF2Q92785 391 aa22.87■■□□□ 1.25
HDAC7-208ENST00000425451 DBNDD1Q9H9R9 158 aa22.87■■□□□ 1.25
HDAC7-208ENST00000425451 MBIPQ9NS73 344 aa22.87■■□□□ 1.25
HDAC7-208ENST00000425451 TSKSQ9UJT2 592 aa22.87■■□□□ 1.25
HDAC7-208ENST00000425451 RIMBP2O15034 1052 aa22.86■■□□□ 1.25
HDAC7-208ENST00000425451 DLK2Q6UY11 383 aa22.86■■□□□ 1.25
HDAC7-208ENST00000425451 ZNF408Q9H9D4 720 aa22.86■■□□□ 1.25
HDAC7-208ENST00000425451 KCNQ5Q9NR82 932 aa22.86■■□□□ 1.25
HDAC7-208ENST00000425451 IRS4O14654 1257 aaPredicted RBP22.85■■□□□ 1.25
HDAC7-208ENST00000425451 EGFRP00533 1210 aa22.85■■□□□ 1.25
HDAC7-208ENST00000425451 ZNF853P0CG23 659 aa22.85■■□□□ 1.25
HDAC7-208ENST00000425451 SAMD7Q7Z3H4 446 aa22.85■■□□□ 1.25
HDAC7-208ENST00000425451 USP48Q86UV5 1035 aa22.85■■□□□ 1.25
HDAC7-208ENST00000425451 C6orf229H3BNL8 230 aa22.84■■□□□ 1.25
HDAC7-208ENST00000425451 RTL9Q8NET4 1388 aa22.84■■□□□ 1.25
HDAC7-208ENST00000425451 RPS8P62241 208 aaKnown RBP22.83■■□□□ 1.25
HDAC7-208ENST00000425451 DOK7Q18PE1 504 aa22.83■■□□□ 1.25
HDAC7-208ENST00000425451 TBC1D16Q8TBP0 767 aa22.83■■□□□ 1.25
HDAC7-208ENST00000425451 ECE2O60344 883 aa22.82■■□□□ 1.24
HDAC7-208ENST00000425451 BRPF1P55201 1214 aaPredicted RBP22.82■■□□□ 1.24
HDAC7-208ENST00000425451 TBC1D10BQ4KMP7 808 aaPredicted RBP22.82■■□□□ 1.24
HDAC7-208ENST00000425451 PHAXQ9H814 394 aaKnown RBP22.82■■□□□ 1.24
HDAC7-208ENST00000425451 RIC3Q7Z5B4 369 aa22.81■■□□□ 1.24
HDAC7-208ENST00000425451 ZBTB38Q8NAP3 1195 aaPredicted RBP22.81■■□□□ 1.24
HDAC7-208ENST00000425451 ZIC5Q96T25 663 aa22.81■■□□□ 1.24
HDAC7-208ENST00000425451 SEC31BQ9NQW1 1179 aa22.81■■□□□ 1.24
HDAC7-208ENST00000425451 CA12O43570 354 aa22.8■■□□□ 1.24
HDAC7-208ENST00000425451 RPS12P25398 132 aaKnown RBP22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms