RNA–Protein interactions for RNA: ENST00000425208.6

HMGA2-205, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best) BASIC

Gene HMGA2, Length 1,444 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-205ENST00000425208 DZIP1LQ8IYY4 767 aaKnown RBP27.64■■■□□ 2.02
HMGA2-205ENST00000425208 NBPF7P0C2Y1 421 aaPredicted RBP27.63■■■□□ 2.01
HMGA2-205ENST00000425208 CCDC152Q4G0S7 254 aa27.63■■■□□ 2.01
HMGA2-205ENST00000425208 PRPF40BQ6NWY9 871 aaKnown RBP27.63■■■□□ 2.01
HMGA2-205ENST00000425208 DDX46Q7L014 1031 aaKnown RBP27.63■■■□□ 2.01
HMGA2-205ENST00000425208 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.63■■■□□ 2.01
HMGA2-205ENST00000425208 CRAMP1Q96RY5 1269 aa27.63■■■□□ 2.01
HMGA2-205ENST00000425208 MS4A1P11836 297 aa27.62■■■□□ 2.01
HMGA2-205ENST00000425208 USP44Q9H0E7 712 aa27.62■■■□□ 2.01
HMGA2-205ENST00000425208 GRIN3BO60391 1043 aa27.6■■■□□ 2.01
HMGA2-205ENST00000425208 TMEM57Q8N5G2 664 aa27.6■■■□□ 2.01
HMGA2-205ENST00000425208 TAF1P21675 1872 aa27.6■■■□□ 2.01
HMGA2-205ENST00000425208 TTLL11Q8NHH1 800 aa27.59■■■□□ 2.01
HMGA2-205ENST00000425208 PLIN1O60240 522 aa27.58■■■□□ 2.01
HMGA2-205ENST00000425208 RLBP1P12271 317 aa27.58■■■□□ 2.01
HMGA2-205ENST00000425208 CCDC85AQ96PX6 553 aaPredicted RBP27.58■■■□□ 2.01
HMGA2-205ENST00000425208 UBTFL1P0CB47 393 aaPredicted RBP27.58■■■□□ 2
HMGA2-205ENST00000425208 GRAPQ13588 217 aa27.58■■■□□ 2
HMGA2-205ENST00000425208 GRAPLQ8TC17 118 aaPredicted RBP27.58■■■□□ 2
HMGA2-205ENST00000425208 SUCLG2Q96I99 432 aa27.58■■■□□ 2
HMGA2-205ENST00000425208 ITPRIPQ8IWB1 547 aa27.57■■■□□ 2
HMGA2-205ENST00000425208 RTL9Q8NET4 1388 aa27.56■■■□□ 2
HMGA2-205ENST00000425208 C21orf2O43822 256 aa27.56■■■□□ 2
HMGA2-205ENST00000425208 FOXO4P98177 505 aa27.56■■■□□ 2
HMGA2-205ENST00000425208 MEIS3Q99687 375 aa27.56■■■□□ 2
HMGA2-205ENST00000425208 ZNF219Q9P2Y4 722 aaPredicted RBP27.56■■■□□ 2
HMGA2-205ENST00000425208 HDAC5Q9UQL6 1122 aa27.56■■■□□ 2
HMGA2-205ENST00000425208 PPEF1O14829 653 aaPredicted RBP27.55■■■□□ 2
HMGA2-205ENST00000425208 CSF1RP07333 972 aa27.55■■■□□ 2
HMGA2-205ENST00000425208 SOGA3Q5TF21 947 aa27.55■■■□□ 2
HMGA2-205ENST00000425208 PANK1Q8TE04 598 aa27.55■■■□□ 2
HMGA2-205ENST00000425208 GREM2Q9H772 168 aa27.55■■■□□ 2
HMGA2-205ENST00000425208 BBOX1O75936 387 aa27.54■■■□□ 2
HMGA2-205ENST00000425208 GNAI3P08754 354 aa27.54■■■□□ 2
HMGA2-205ENST00000425208 EPHA10Q5JZY3 1008 aa27.54■■■□□ 2
HMGA2-205ENST00000425208 KAZALD1Q96I82 304 aa27.54■■■□□ 2
HMGA2-205ENST00000425208 SEC31BQ9NQW1 1179 aa27.54■■■□□ 2
HMGA2-205ENST00000425208 FAM161AQ3B820 660 aa27.53■■■□□ 2
HMGA2-205ENST00000425208 LMBR1LQ6UX01 489 aa27.53■■■□□ 2
HMGA2-205ENST00000425208 C7orf43Q8WVR3 580 aa27.53■■■□□ 2
HMGA2-205ENST00000425208 CELF1Q92879 486 aaKnown RBP27.53■■■□□ 2
HMGA2-205ENST00000425208 CDC5LQ99459 802 aaKnown RBP27.53■■■□□ 2
HMGA2-205ENST00000425208 BICC1Q9H694 974 aaKnown RBP27.53■■■□□ 2
HMGA2-205ENST00000425208 CHMP3Q9Y3E7 222 aa27.53■■■□□ 2
HMGA2-205ENST00000425208 TMC4Q7Z404 712 aa27.52■■■□□ 2
HMGA2-205ENST00000425208 COL4A1P02462 1669 aa27.52■■■□□ 2
HMGA2-205ENST00000425208 ITGA6P23229 1130 aa27.51■■□□□ 1.99
HMGA2-205ENST00000425208 PDE3AQ14432 1141 aa27.51■■□□□ 1.99
HMGA2-205ENST00000425208 TMX4Q9H1E5 349 aaPredicted RBP27.51■■□□□ 1.99
HMGA2-205ENST00000425208 FER1L6Q2WGJ9 1857 aa27.51■■□□□ 1.99
HMGA2-205ENST00000425208 RRP1P56182 461 aaKnown RBP27.5■■□□□ 1.99
HMGA2-205ENST00000425208 RPS8P62241 208 aaKnown RBP27.5■■□□□ 1.99
HMGA2-205ENST00000425208 RABL6Q3YEC7 729 aaPredicted RBP27.5■■□□□ 1.99
HMGA2-205ENST00000425208 CCDC93Q567U6 631 aa27.5■■□□□ 1.99
HMGA2-205ENST00000425208 ARHGAP27Q6ZUM4 889 aa27.5■■□□□ 1.99
HMGA2-205ENST00000425208 SPEF2Q9C093 1822 aa27.5■■□□□ 1.99
HMGA2-205ENST00000425208 IFIT5Q13325 482 aaKnown RBP27.5■■□□□ 1.99
HMGA2-205ENST00000425208 CC2D2BQ6DHV5 1058 aa27.5■■□□□ 1.99
HMGA2-205ENST00000425208 ANKRD18AQ8IVF6 992 aa27.5■■□□□ 1.99
HMGA2-205ENST00000425208 ATP6V0A2Q9Y487 856 aa27.5■■□□□ 1.99
HMGA2-205ENST00000425208 LRRC37AA6NMS7 1700 aa27.49■■□□□ 1.99
HMGA2-205ENST00000425208 ANKRD18BA2A2Z9 1011 aa27.49■■□□□ 1.99
HMGA2-205ENST00000425208 LRRFIP2Q9Y608 721 aaKnown RBP27.49■■□□□ 1.99
HMGA2-205ENST00000425208 MVPQ14764 893 aaKnown RBP27.48■■□□□ 1.99
HMGA2-205ENST00000425208 CCDC57Q2TAC2 916 aa27.48■■□□□ 1.99
HMGA2-205ENST00000425208 OLFM4Q6UX06 510 aa27.48■■□□□ 1.99
HMGA2-205ENST00000425208 ANKRD44Q8N8A2 993 aa27.48■■□□□ 1.99
HMGA2-205ENST00000425208 SP8Q8IXZ3 490 aa27.47■■□□□ 1.99
HMGA2-205ENST00000425208 RTKN2Q8IZC4 609 aa27.47■■□□□ 1.99
HMGA2-205ENST00000425208 COG6Q9Y2V7 657 aa27.47■■□□□ 1.99
HMGA2-205ENST00000425208 CHD4Q14839 1912 aa27.47■■□□□ 1.99
HMGA2-205ENST00000425208 GNAI2P04899 355 aa27.46■■□□□ 1.99
HMGA2-205ENST00000425208 IGHMBP2P38935 993 aaKnown RBP27.46■■□□□ 1.99
HMGA2-205ENST00000425208 GRIPAP1Q4V328 841 aa27.46■■□□□ 1.99
HMGA2-205ENST00000425208 C20orf194Q5TEA3 1177 aa27.46■■□□□ 1.99
HMGA2-205ENST00000425208 DDX19BQ9UMR2 479 aa27.46■■□□□ 1.99
HMGA2-205ENST00000425208 ZBTB7BO15156 539 aaPredicted RBP27.45■■□□□ 1.98
HMGA2-205ENST00000425208 SNED1Q8TER0 1413 aa27.44■■□□□ 1.98
HMGA2-205ENST00000425208 TAF7LQ5H9L4 462 aa27.44■■□□□ 1.98
HMGA2-205ENST00000425208 TAOK3Q9H2K8 898 aa27.44■■□□□ 1.98
HMGA2-205ENST00000425208 NFKBIEO00221 500 aa27.43■■□□□ 1.98
HMGA2-205ENST00000425208 SLC51AQ86UW1 340 aa27.43■■□□□ 1.98
HMGA2-205ENST00000425208 MPHOSPH8Q99549 860 aa27.43■■□□□ 1.98
HMGA2-205ENST00000425208 RASSF7Q02833 373 aa27.42■■□□□ 1.98
HMGA2-205ENST00000425208 BSDC1Q9NW68 430 aaPredicted RBP27.42■■□□□ 1.98
HMGA2-205ENST00000425208 LTBP3Q9NS15 1303 aa27.42■■□□□ 1.98
HMGA2-205ENST00000425208 SBF1O95248 1867 aa27.42■■□□□ 1.98
HMGA2-205ENST00000425208 CHMP4BQ9H444 224 aaKnown RBP27.41■■□□□ 1.98
HMGA2-205ENST00000425208 FKBP4Q02790 459 aaKnown RBP eCLIP27.41■■□□□ 1.983e-6■■□□□ 13
HMGA2-205ENST00000425208 CCDC88AQ3V6T2 1871 aa27.4■■□□□ 1.98
HMGA2-205ENST00000425208 DPP8Q6V1X1 898 aaPredicted RBP27.4■■□□□ 1.98
HMGA2-205ENST00000425208 PSMD1Q99460 953 aa27.4■■□□□ 1.98
HMGA2-205ENST00000425208 MPNDQ8N594 471 aa27.39■■□□□ 1.97
HMGA2-205ENST00000425208 ZNF594Q96JF6 807 aaPredicted RBP27.39■■□□□ 1.97
HMGA2-205ENST00000425208 LTBP1Q14766 1721 aa27.38■■□□□ 1.97
HMGA2-205ENST00000425208 C1orf115Q9H7X2 142 aa27.38■■□□□ 1.97
HMGA2-205ENST00000425208 NSFL1CQ9UNZ2 370 aaKnown RBP27.38■■□□□ 1.97
HMGA2-205ENST00000425208 MTX1Q13505 466 aa27.37■■□□□ 1.97
HMGA2-205ENST00000425208 LDHAL6AQ6ZMR3 332 aa27.37■■□□□ 1.97
HMGA2-205ENST00000425208 MINPP1Q9UNW1 487 aa27.37■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms