RNA–Protein interactions for RNA: ENST00000425071.5

HDAC9-209, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-209ENST00000425071 ELOA3BQ3SY89 546 aa7.06□□□□□ -1.28
HDAC9-209ENST00000425071 ZNF385CQ66K41 422 aaPredicted RBP7.06□□□□□ -1.28
HDAC9-209ENST00000425071 GALNT6Q8NCL4 622 aa7.06□□□□□ -1.28
HDAC9-209ENST00000425071 ELOA3Q8NG57 546 aa7.06□□□□□ -1.28
HDAC9-209ENST00000425071 EDARADDQ8WWZ3 215 aa7.06□□□□□ -1.28
HDAC9-209ENST00000425071 EDEM1Q92611 657 aa7.06□□□□□ -1.28
HDAC9-209ENST00000425071 NUDT16Q96DE0 195 aaKnown RBP7.06□□□□□ -1.28
HDAC9-209ENST00000425071 KLF15Q9UIH9 416 aa7.06□□□□□ -1.28
HDAC9-209ENST00000425071 IVNS1ABPQ9Y6Y0 642 aa7.06□□□□□ -1.28
HDAC9-209ENST00000425071 NDUFB5O43674 189 aa7.05□□□□□ -1.28
HDAC9-209ENST00000425071 RARAP10276 462 aa7.05□□□□□ -1.28
HDAC9-209ENST00000425071 NFKB1P19838 968 aa7.05□□□□□ -1.28
HDAC9-209ENST00000425071 SOX18P35713 384 aa7.05□□□□□ -1.28
HDAC9-209ENST00000425071 ARHGAP4P98171 946 aa7.05□□□□□ -1.28
HDAC9-209ENST00000425071 GRIN2CQ14957 1233 aa7.05□□□□□ -1.28
HDAC9-209ENST00000425071 ATCAYQ86WG3 371 aa7.05□□□□□ -1.28
HDAC9-209ENST00000425071 AEBP1Q8IUX7 1158 aa7.05□□□□□ -1.28
HDAC9-209ENST00000425071 MDFIQ99750 246 aa7.05□□□□□ -1.28
HDAC9-209ENST00000425071 BRPF3Q9ULD4 1205 aa7.05□□□□□ -1.28
HDAC9-209ENST00000425071 FZD6O60353 706 aa7.04□□□□□ -1.28
HDAC9-209ENST00000425071 SASH3O75995 380 aa7.04□□□□□ -1.28
HDAC9-209ENST00000425071 ARHGEF15O94989 841 aa7.04□□□□□ -1.28
HDAC9-209ENST00000425071 HOXD8P13378 290 aaPredicted RBP7.04□□□□□ -1.28
HDAC9-209ENST00000425071 TARSP26639 723 aaKnown RBP7.04□□□□□ -1.28
HDAC9-209ENST00000425071 PDE3BQ13370 1112 aa7.04□□□□□ -1.28
HDAC9-209ENST00000425071 TRIP4Q15650 581 aaPredicted RBP7.04□□□□□ -1.28
HDAC9-209ENST00000425071 KANK3Q6NY19 840 aa7.04□□□□□ -1.28
HDAC9-209ENST00000425071 FCHSD1Q86WN1 690 aa7.04□□□□□ -1.28
HDAC9-209ENST00000425071 TLR7Q9NYK1 1049 aaKnown RBP7.04□□□□□ -1.28
HDAC9-209ENST00000425071 USP20Q9Y2K6 914 aa7.04□□□□□ -1.28
HDAC9-209ENST00000425071 NEFLP07196 543 aa7.03□□□□□ -1.28
HDAC9-209ENST00000425071 PSAPP07602 524 aa7.03□□□□□ -1.28
HDAC9-209ENST00000425071 NRLP54845 237 aa7.03□□□□□ -1.28
HDAC9-209ENST00000425071 TTC39BQ5VTQ0 682 aaPredicted RBP7.03□□□□□ -1.28
HDAC9-209ENST00000425071 DHX32Q7L7V1 743 aaKnown RBP7.03□□□□□ -1.28
HDAC9-209ENST00000425071 GJD3Q8N144 294 aa7.03□□□□□ -1.28
HDAC9-209ENST00000425071 NEDD1Q8NHV4 660 aa7.03□□□□□ -1.28
HDAC9-209ENST00000425071 TRPM4Q8TD43 1214 aa7.03□□□□□ -1.28
HDAC9-209ENST00000425071 WHAMMQ8TF30 809 aa7.03□□□□□ -1.28
HDAC9-209ENST00000425071 PMEPA1Q969W9 287 aa7.03□□□□□ -1.28
HDAC9-209ENST00000425071 ABI2Q9NYB9 513 aaPredicted RBP7.03□□□□□ -1.28
HDAC9-209ENST00000425071 BIN2Q9UBW5 565 aaPredicted RBP7.03□□□□□ -1.28
HDAC9-209ENST00000425071 POLIQ9UNA4 740 aa7.03□□□□□ -1.28
HDAC9-209ENST00000425071 PIK3R2O00459 728 aa7.02□□□□□ -1.29
HDAC9-209ENST00000425071 ADH7P40394 386 aa7.02□□□□□ -1.29
HDAC9-209ENST00000425071 GPLD1P80108 840 aa7.02□□□□□ -1.29
HDAC9-209ENST00000425071 PLAURQ03405 335 aa7.02□□□□□ -1.29
HDAC9-209ENST00000425071 C8orf34Q49A92 452 aa7.02□□□□□ -1.29
HDAC9-209ENST00000425071 KRT25Q7Z3Z0 450 aa7.02□□□□□ -1.29
HDAC9-209ENST00000425071 ZNF438Q7Z4V0 828 aa7.02□□□□□ -1.29
HDAC9-209ENST00000425071 RAB44Q7Z6P3 723 aaPredicted RBP7.02□□□□□ -1.29
HDAC9-209ENST00000425071 BTBD6Q96KE9 485 aa7.02□□□□□ -1.29
HDAC9-209ENST00000425071 UBE2OQ9C0C9 1292 aaKnown RBP7.02□□□□□ -1.29
HDAC9-209ENST00000425071 ELP3Q9H9T3 547 aa7.02□□□□□ -1.29
HDAC9-209ENST00000425071 ZFATQ9P243 1243 aa7.02□□□□□ -1.29
HDAC9-209ENST00000425071 C1orf229Q6ZS94 237 aaPredicted RBP7.01□□□□□ -1.29
HDAC9-209ENST00000425071 RBCK1Q9BYM8 510 aa7.01□□□□□ -1.29
HDAC9-209ENST00000425071 GGNBP2Q9H3C7 697 aa7.01□□□□□ -1.29
HDAC9-209ENST00000425071 CCDC87Q9NVE4 849 aa7.01□□□□□ -1.29
HDAC9-209ENST00000425071 DNAJB12Q9NXW2 375 aaKnown RBP7.01□□□□□ -1.29
HDAC9-209ENST00000425071 MMP20O60882 483 aa7□□□□□ -1.29
HDAC9-209ENST00000425071 AMPD1P23109 780 aa7□□□□□ -1.29
HDAC9-209ENST00000425071 CHSY3Q70JA7 882 aa7□□□□□ -1.29
HDAC9-209ENST00000425071 OR13H1Q8NG92 308 aa7□□□□□ -1.29
HDAC9-209ENST00000425071 DMRTB1Q96MA1 342 aa7□□□□□ -1.29
HDAC9-209ENST00000425071 DCTN4Q9UJW0 460 aa7□□□□□ -1.29
HDAC9-209ENST00000425071 SLC6A14Q9UN76 642 aa7□□□□□ -1.29
HDAC9-209ENST00000425071 PHF20L1A8MW92 1017 aa6.99□□□□□ -1.29
HDAC9-209ENST00000425071 SHISA8B8ZZ34 492 aa6.99□□□□□ -1.29
HDAC9-209ENST00000425071 SND1Q7KZF4 910 aaKnown RBP eCLIP6.99□□□□□ -1.29
HDAC9-209ENST00000425071 PODNQ7Z5L7 613 aa6.99□□□□□ -1.29
HDAC9-209ENST00000425071 SNX29Q8TEQ0 813 aa6.99□□□□□ -1.29
HDAC9-209ENST00000425071 SCARF2Q96GP6 870 aaPredicted RBP6.99□□□□□ -1.29
HDAC9-209ENST00000425071 FAM129BQ96TA1 746 aa6.99□□□□□ -1.29
HDAC9-209ENST00000425071 RBSNQ9H1K0 784 aa6.99□□□□□ -1.29
HDAC9-209ENST00000425071 PRDM6Q9NQX0 595 aa6.99□□□□□ -1.29
HDAC9-209ENST00000425071 FRRS1LQ9P0K9 344 aa6.99□□□□□ -1.29
HDAC9-209ENST00000425071 ADAMTS8Q9UP79 889 aa6.99□□□□□ -1.29
HDAC9-209ENST00000425071 LOC102724428A0A0B4J2F2 783 aa6.98□□□□□ -1.29
HDAC9-209ENST00000425071 ZBTB7CA1YPR0 619 aa6.98□□□□□ -1.29
HDAC9-209ENST00000425071 MARSP56192 900 aaKnown RBP6.98□□□□□ -1.29
HDAC9-209ENST00000425071 SIK1P57059 783 aa6.98□□□□□ -1.29
HDAC9-209ENST00000425071 HYAL2Q12891 473 aa6.98□□□□□ -1.29
HDAC9-209ENST00000425071 BEND7Q8N7W2 519 aaPredicted RBP6.98□□□□□ -1.29
HDAC9-209ENST00000425071 TTC9Q92623 222 aa6.98□□□□□ -1.29
HDAC9-209ENST00000425071 IGFLR1Q9H665 355 aa6.98□□□□□ -1.29
HDAC9-209ENST00000425071 TNFRSF21O75509 655 aa6.97□□□□□ -1.29
HDAC9-209ENST00000425071 TBC1D8BQ0IIM8 1120 aa6.97□□□□□ -1.29
HDAC9-209ENST00000425071 FAM35AQ86V20 835 aa6.97□□□□□ -1.29
HDAC9-209ENST00000425071 ZSCAN29Q8IWY8 852 aaPredicted RBP6.97□□□□□ -1.29
HDAC9-209ENST00000425071 ALKBH8Q96BT7 664 aaKnown RBP6.97□□□□□ -1.29
HDAC9-209ENST00000425071 SPACA7Q96KW9 195 aa6.97□□□□□ -1.29
HDAC9-209ENST00000425071 TMEM63CQ9P1W3 806 aa6.97□□□□□ -1.29
HDAC9-209ENST00000425071 MKL2Q9ULH7 1088 aa6.97□□□□□ -1.29
HDAC9-209ENST00000425071 ZBTB42B2RXF5 422 aa6.96□□□□□ -1.3
HDAC9-209ENST00000425071 RNF225M0QZC1 329 aaPredicted RBP6.96□□□□□ -1.3
HDAC9-209ENST00000425071 KIF4AO95239 1232 aa6.96□□□□□ -1.3
HDAC9-209ENST00000425071 GHRHP01286 108 aa6.96□□□□□ -1.3
HDAC9-209ENST00000425071 CES1P23141 567 aa6.96□□□□□ -1.3
HDAC9-209ENST00000425071 CACTIN-AS1Q8N1I8 211 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms