RNA–Protein interactions for RNA: ENST00000424922.5

CALD1-206, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-206ENST00000424922 NTSR2O95665 410 aa18.44■□□□□ 0.54
CALD1-206ENST00000424922 COL24A1Q17RW2 1714 aa18.44■□□□□ 0.54
CALD1-206ENST00000424922 SSFA2P28290 1259 aa18.43■□□□□ 0.54
CALD1-206ENST00000424922 NUTM1Q86Y26 1132 aa18.43■□□□□ 0.54
CALD1-206ENST00000424922 ERC1Q8IUD2 1116 aa18.43■□□□□ 0.54
CALD1-206ENST00000424922 PDE8AO60658 829 aa18.43■□□□□ 0.54
CALD1-206ENST00000424922 CSF1RP07333 972 aa18.43■□□□□ 0.54
CALD1-206ENST00000424922 HCLS1P14317 486 aaPredicted RBP18.43■□□□□ 0.54
CALD1-206ENST00000424922 SLC4A3P48751 1232 aa18.43■□□□□ 0.54
CALD1-206ENST00000424922 CTSWP56202 376 aa18.43■□□□□ 0.54
CALD1-206ENST00000424922 SETDB2Q96T68 719 aa18.43■□□□□ 0.54
CALD1-206ENST00000424922 TTLL11Q8NHH1 800 aa18.42■□□□□ 0.54
CALD1-206ENST00000424922 SASH1O94885 1247 aa18.41■□□□□ 0.54
CALD1-206ENST00000424922 ZNF827Q17R98 1081 aa18.41■□□□□ 0.54
CALD1-206ENST00000424922 CCDC57Q2TAC2 916 aa18.41■□□□□ 0.54
CALD1-206ENST00000424922 ZNF594Q96JF6 807 aaPredicted RBP18.41■□□□□ 0.54
CALD1-206ENST00000424922 PKNOX2Q96KN3 472 aa18.41■□□□□ 0.54
CALD1-206ENST00000424922 TFCP2L1Q9NZI6 479 aa18.41■□□□□ 0.54
CALD1-206ENST00000424922 EN1Q05925 392 aaPredicted RBP18.4■□□□□ 0.54
CALD1-206ENST00000424922 AKT1S1Q96B36 256 aa18.4■□□□□ 0.54
CALD1-206ENST00000424922 GREM2Q9H772 168 aa18.4■□□□□ 0.54
CALD1-206ENST00000424922 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.4■□□□□ 0.54
CALD1-206ENST00000424922 DEKP35659 375 aaKnown RBP18.39■□□□□ 0.53
CALD1-206ENST00000424922 PDE1AP54750 535 aa18.39■□□□□ 0.53
CALD1-206ENST00000424922 IFIT5Q13325 482 aaKnown RBP18.39■□□□□ 0.53
CALD1-206ENST00000424922 EZH2Q15910 746 aaKnown RBP18.39■□□□□ 0.53
CALD1-206ENST00000424922 ERFEQ4G0M1 354 aa18.39■□□□□ 0.53
CALD1-206ENST00000424922 BMP2KLQ5H9B9 411 aa18.39■□□□□ 0.53
CALD1-206ENST00000424922 CLASRPQ8N2M8 674 aaKnown RBP18.39■□□□□ 0.53
CALD1-206ENST00000424922 SALL3Q9BXA9 1300 aa18.39■□□□□ 0.53
CALD1-206ENST00000424922 MX1P20591 662 aa18.38■□□□□ 0.53
CALD1-206ENST00000424922 GTF2E1P29083 439 aaPredicted RBP18.38■□□□□ 0.53
CALD1-206ENST00000424922 CAMKK2Q96RR4 588 aa18.38■□□□□ 0.53
CALD1-206ENST00000424922 GYS1P13807 737 aa18.38■□□□□ 0.53
CALD1-206ENST00000424922 HSP90B1P14625 803 aaKnown RBP18.38■□□□□ 0.53
CALD1-206ENST00000424922 ITGA6P23229 1130 aa18.38■□□□□ 0.53
CALD1-206ENST00000424922 TTC22Q5TAA0 569 aa18.38■□□□□ 0.53
CALD1-206ENST00000424922 TSHZ3Q63HK5 1081 aa18.38■□□□□ 0.53
CALD1-206ENST00000424922 NBPF5PQ86XG9 351 aaPredicted RBP18.38■□□□□ 0.53
CALD1-206ENST00000424922 SPEF2Q9C093 1822 aa18.38■□□□□ 0.53
CALD1-206ENST00000424922 TAF7LQ5H9L4 462 aa18.37■□□□□ 0.53
CALD1-206ENST00000424922 NYXQ9GZU5 481 aa18.37■□□□□ 0.53
CALD1-206ENST00000424922 TFCP2Q12800 502 aa18.37■□□□□ 0.53
CALD1-206ENST00000424922 SF3B2Q13435 895 aaKnown RBP18.37■□□□□ 0.53
CALD1-206ENST00000424922 NFIXQ14938 502 aa18.37■□□□□ 0.53
CALD1-206ENST00000424922 LRRC24Q50LG9 513 aa18.37■□□□□ 0.53
CALD1-206ENST00000424922 ATG9AQ7Z3C6 839 aa18.37■□□□□ 0.53
CALD1-206ENST00000424922 OSBPL3Q9H4L5 887 aa18.37■□□□□ 0.53
CALD1-206ENST00000424922 TAF1P21675 1872 aa18.36■□□□□ 0.53
CALD1-206ENST00000424922 ANKRD18BA2A2Z9 1011 aa18.36■□□□□ 0.53
CALD1-206ENST00000424922 EYA2O00167 538 aa18.36■□□□□ 0.53
CALD1-206ENST00000424922 GSPT1P15170 499 aaKnown RBP18.36■□□□□ 0.53
CALD1-206ENST00000424922 AK9Q5TCS8 1911 aa18.36■□□□□ 0.53
CALD1-206ENST00000424922 AACSQ86V21 672 aa18.36■□□□□ 0.53
CALD1-206ENST00000424922 PUS3Q9BZE2 481 aaKnown RBP18.36■□□□□ 0.53
CALD1-206ENST00000424922 TPTE2Q6XPS3 522 aa18.35■□□□□ 0.53
CALD1-206ENST00000424922 CARMIL3Q8ND23 1372 aa18.35■□□□□ 0.53
CALD1-206ENST00000424922 IFIT2P09913 472 aaKnown RBP18.35■□□□□ 0.53
CALD1-206ENST00000424922 NFKBIBQ15653 356 aa18.35■□□□□ 0.53
CALD1-206ENST00000424922 COL23A1Q86Y22 540 aaPredicted RBP18.35■□□□□ 0.53
CALD1-206ENST00000424922 EAF2Q96CJ1 260 aaPredicted RBP18.35■□□□□ 0.53
CALD1-206ENST00000424922 C22orf23Q9BZE7 217 aa18.35■□□□□ 0.53
CALD1-206ENST00000424922 STAP2Q9UGK3 403 aa18.35■□□□□ 0.53
CALD1-206ENST00000424922 ABCC12Q96J65 1359 aa18.34■□□□□ 0.53
CALD1-206ENST00000424922 CIAO1O76071 339 aa18.34■□□□□ 0.53
CALD1-206ENST00000424922 IL15P40933 162 aaPredicted RBP18.34■□□□□ 0.53
CALD1-206ENST00000424922 CCDC24Q8N4L8 307 aa18.34■□□□□ 0.53
CALD1-206ENST00000424922 NPHP1O15259 732 aa18.34■□□□□ 0.53
CALD1-206ENST00000424922 BAG6P46379 1132 aa18.34■□□□□ 0.53
CALD1-206ENST00000424922 CCDC152Q4G0S7 254 aa18.34■□□□□ 0.53
CALD1-206ENST00000424922 SLC10A5Q5PT55 438 aa18.33■□□□□ 0.52
CALD1-206ENST00000424922 C3orf67Q6ZVT6 689 aa18.33■□□□□ 0.52
CALD1-206ENST00000424922 DEFB132Q7Z7B7 95 aa18.33■□□□□ 0.52
CALD1-206ENST00000424922 CCDC8Q9H0W5 538 aaPredicted RBP18.33■□□□□ 0.52
CALD1-206ENST00000424922 LDHAL6AQ6ZMR3 332 aa18.32■□□□□ 0.52
CALD1-206ENST00000424922 FLAD1Q8NFF5 587 aa18.32■□□□□ 0.52
CALD1-206ENST00000424922 SEC31BQ9NQW1 1179 aa18.32■□□□□ 0.52
CALD1-206ENST00000424922 FBXO3Q9UK99 471 aa18.32■□□□□ 0.52
CALD1-206ENST00000424922 MFAP1P55081 439 aaKnown RBP18.32■□□□□ 0.52
CALD1-206ENST00000424922 TNNI3KQ59H18 835 aa18.32■□□□□ 0.52
CALD1-206ENST00000424922 FPGT-TNNI3KV9GXZ4 949 aa18.32■□□□□ 0.52
CALD1-206ENST00000424922 AOX1Q06278 1338 aa18.31■□□□□ 0.52
CALD1-206ENST00000424922 PNPLA7Q6ZV29 1317 aa18.31■□□□□ 0.52
CALD1-206ENST00000424922 TM4SF1P30408 202 aa18.31■□□□□ 0.52
CALD1-206ENST00000424922 TLR7Q9NYK1 1049 aaKnown RBP18.31■□□□□ 0.52
CALD1-206ENST00000424922 SDSP20132 328 aa18.31■□□□□ 0.52
CALD1-206ENST00000424922 CNNM1Q9NRU3 951 aa18.31■□□□□ 0.52
CALD1-206ENST00000424922 TNRC6CQ9HCJ0 1690 aaKnown RBP18.3■□□□□ 0.52
CALD1-206ENST00000424922 RBM25P49756 843 aaKnown RBP18.3■□□□□ 0.52
CALD1-206ENST00000424922 SF3B3Q15393 1217 aaKnown RBP18.3■□□□□ 0.52
CALD1-206ENST00000424922 CNBD1Q8NA66 436 aa18.3■□□□□ 0.52
CALD1-206ENST00000424922 PI4K2BQ8TCG2 481 aa18.3■□□□□ 0.52
CALD1-206ENST00000424922 TBC1D2Q9BYX2 928 aa18.3■□□□□ 0.52
CALD1-206ENST00000424922 CEP126Q9P2H0 1117 aa18.3■□□□□ 0.52
CALD1-206ENST00000424922 RIPOR2Q9Y4F9 1068 aa18.3■□□□□ 0.52
CALD1-206ENST00000424922 RTL9Q8NET4 1388 aa18.3■□□□□ 0.52
CALD1-206ENST00000424922 QSER1Q2KHR3 1735 aa18.3■□□□□ 0.52
CALD1-206ENST00000424922 TTC41PQ6P2S7 1318 aa18.3■□□□□ 0.52
CALD1-206ENST00000424922 SLC15A2Q16348 729 aa18.29■□□□□ 0.52
CALD1-206ENST00000424922 GPATCH3Q96I76 525 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms