RNA–Protein interactions for RNA: ENST00000424833.5

SCN2A-204, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

TSL 1 (best)

Gene SCN2A, Length 1,807 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-204ENST00000424833 RUFY3Q7L099 469 aa10□□□□□ -0.81
SCN2A-204ENST00000424833 ZNF589Q86UQ0 364 aaPredicted RBP10□□□□□ -0.81
SCN2A-204ENST00000424833 ZNF594Q96JF6 807 aaPredicted RBP10□□□□□ -0.81
SCN2A-204ENST00000424833 TAF6LQ9Y6J9 622 aa10□□□□□ -0.81
SCN2A-204ENST00000424833 AK2P54819 239 aa10□□□□□ -0.81
SCN2A-204ENST00000424833 TRIM28Q13263 835 aaKnown RBP10□□□□□ -0.81
SCN2A-204ENST00000424833 LRRC24Q50LG9 513 aa10□□□□□ -0.81
SCN2A-204ENST00000424833 KIAA1211Q6ZU35 1233 aa10□□□□□ -0.81
SCN2A-204ENST00000424833 RUFY2Q8WXA3 655 aa10□□□□□ -0.81
SCN2A-204ENST00000424833 MAP4K1Q92918 833 aa10□□□□□ -0.81
SCN2A-204ENST00000424833 INTS4Q96HW7 963 aaKnown RBP10□□□□□ -0.81
SCN2A-204ENST00000424833 FSD1Q9BTV5 496 aa10□□□□□ -0.81
SCN2A-204ENST00000424833 PUS3Q9BZE2 481 aaKnown RBP10□□□□□ -0.81
SCN2A-204ENST00000424833 BRPF3Q9ULD4 1205 aa10□□□□□ -0.81
SCN2A-204ENST00000424833 SPATA31A1Q5TZJ5 1347 aa10□□□□□ -0.81
SCN2A-204ENST00000424833 RPAP1Q9BWH6 1393 aaPredicted RBP10□□□□□ -0.81
SCN2A-204ENST00000424833 HLFQ16534 295 aa9.99□□□□□ -0.81
SCN2A-204ENST00000424833 PRPF40BQ6NWY9 871 aaKnown RBP9.99□□□□□ -0.81
SCN2A-204ENST00000424833 SYNE4Q8N205 404 aa9.99□□□□□ -0.81
SCN2A-204ENST00000424833 TEX13AQ9BXU3 409 aaPredicted RBP9.99□□□□□ -0.81
SCN2A-204ENST00000424833 ZBTB1Q9Y2K1 713 aa9.99□□□□□ -0.81
SCN2A-204ENST00000424833 CHMP3Q9Y3E7 222 aa9.99□□□□□ -0.81
SCN2A-204ENST00000424833 ZNF330Q9Y3S2 320 aaPredicted RBP9.99□□□□□ -0.81
SCN2A-204ENST00000424833 RBM8AQ9Y5S9 174 aaKnown RBP9.99□□□□□ -0.81
SCN2A-204ENST00000424833 MAP3K15Q6ZN16 1313 aa9.99□□□□□ -0.81
SCN2A-204ENST00000424833 RFX7Q2KHR2 1363 aa9.99□□□□□ -0.81
SCN2A-204ENST00000424833 CICQ96RK0 1608 aaPredicted RBP9.99□□□□□ -0.81
SCN2A-204ENST00000424833 RREB1Q92766 1687 aa9.99□□□□□ -0.81
SCN2A-204ENST00000424833 HIP1O00291 1037 aa9.98□□□□□ -0.81
SCN2A-204ENST00000424833 ADAMTS2O95450 1211 aa9.98□□□□□ -0.81
SCN2A-204ENST00000424833 LARGE1O95461 756 aa9.98□□□□□ -0.81
SCN2A-204ENST00000424833 BRD1O95696 1058 aa9.98□□□□□ -0.81
SCN2A-204ENST00000424833 STARD3NLO95772 234 aa9.98□□□□□ -0.81
SCN2A-204ENST00000424833 FAM89AQ96GI7 184 aa9.98□□□□□ -0.81
SCN2A-204ENST00000424833 HAUS7Q99871 368 aa9.98□□□□□ -0.81
SCN2A-204ENST00000424833 LARP6Q9BRS8 491 aaKnown RBP9.98□□□□□ -0.81
SCN2A-204ENST00000424833 BCL11BQ9C0K0 894 aaPredicted RBP9.98□□□□□ -0.81
SCN2A-204ENST00000424833 RIC1Q4ADV7 1423 aa9.98□□□□□ -0.81
SCN2A-204ENST00000424833 NUP98P52948 1817 aa9.98□□□□□ -0.81
SCN2A-204ENST00000424833 EYA2O00167 538 aa9.98□□□□□ -0.81
SCN2A-204ENST00000424833 EXOC5O00471 708 aa9.98□□□□□ -0.81
SCN2A-204ENST00000424833 SLC27A2O14975 620 aa9.98□□□□□ -0.81
SCN2A-204ENST00000424833 CIAO1O76071 339 aa9.98□□□□□ -0.81
SCN2A-204ENST00000424833 PCCAP05165 728 aaPredicted RBP9.98□□□□□ -0.81
SCN2A-204ENST00000424833 CASTP20810 708 aaKnown RBP9.98□□□□□ -0.81
SCN2A-204ENST00000424833 IL15P40933 162 aaPredicted RBP9.98□□□□□ -0.81
SCN2A-204ENST00000424833 PRIM1P49642 420 aaKnown RBP9.98□□□□□ -0.81
SCN2A-204ENST00000424833 ST3GAL1Q11201 340 aa9.98□□□□□ -0.81
SCN2A-204ENST00000424833 CREB3L3Q68CJ9 461 aa9.98□□□□□ -0.81
SCN2A-204ENST00000424833 GIGYF2Q6Y7W6 1299 aaKnown RBP9.98□□□□□ -0.81
SCN2A-204ENST00000424833 KIF6Q6ZMV9 814 aa9.98□□□□□ -0.81
SCN2A-204ENST00000424833 JAKMIP1Q96N16 626 aaKnown RBP9.98□□□□□ -0.81
SCN2A-204ENST00000424833 PLA2G12BQ9BX93 195 aa9.98□□□□□ -0.81
SCN2A-204ENST00000424833 ZSWIM6Q9HCJ5 1215 aa9.98□□□□□ -0.81
SCN2A-204ENST00000424833 GPR108Q9NPR9 543 aa9.98□□□□□ -0.81
SCN2A-204ENST00000424833 LMBRD1Q9NUN5 540 aa9.98□□□□□ -0.81
SCN2A-204ENST00000424833 NWD2Q9ULI1 1742 aa9.98□□□□□ -0.81
SCN2A-204ENST00000424833 TAF5LO75529 589 aa9.97□□□□□ -0.81
SCN2A-204ENST00000424833 CSF1RP07333 972 aa9.97□□□□□ -0.81
SCN2A-204ENST00000424833 TIMM10P62072 90 aa9.97□□□□□ -0.81
SCN2A-204ENST00000424833 NLRP10Q86W26 655 aa9.97□□□□□ -0.81
SCN2A-204ENST00000424833 TM6SF1Q9BZW5 370 aa9.97□□□□□ -0.81
SCN2A-204ENST00000424833 LRP5O75197 1615 aa9.97□□□□□ -0.81
SCN2A-204ENST00000424833 PALLDQ8WX93 1383 aa9.96□□□□□ -0.81
SCN2A-204ENST00000424833 SPATA31A5Q5VU36 1347 aa9.96□□□□□ -0.81
SCN2A-204ENST00000424833 SPATA31A7Q8IWB4 1347 aa9.96□□□□□ -0.81
SCN2A-204ENST00000424833 SLFNL1Q499Z3 407 aa9.96□□□□□ -0.81
SCN2A-204ENST00000424833 MCTP1Q6DN14 999 aa9.96□□□□□ -0.81
SCN2A-204ENST00000424833 DDX46Q7L014 1031 aaKnown RBP9.96□□□□□ -0.81
SCN2A-204ENST00000424833 ZBTB38Q8NAP3 1195 aaPredicted RBP9.96□□□□□ -0.81
SCN2A-204ENST00000424833 IL27Q8NEV9 243 aa9.96□□□□□ -0.81
SCN2A-204ENST00000424833 SYTL4Q96C24 671 aaPredicted RBP9.96□□□□□ -0.81
SCN2A-204ENST00000424833 SEC62Q99442 399 aaKnown RBP9.96□□□□□ -0.81
SCN2A-204ENST00000424833 DNAJC2Q99543 621 aaKnown RBP9.96□□□□□ -0.81
SCN2A-204ENST00000424833 CCDC9Q9Y3X0 531 aaKnown RBP9.96□□□□□ -0.81
SCN2A-204ENST00000424833 MYH3P11055 1940 aa9.96□□□□□ -0.82
SCN2A-204ENST00000424833 SPEF2Q9C093 1822 aa9.96□□□□□ -0.82
SCN2A-204ENST00000424833 UBN2Q6ZU65 1347 aa9.96□□□□□ -0.82
SCN2A-204ENST00000424833 CDHR2Q9BYE9 1310 aa9.96□□□□□ -0.82
SCN2A-204ENST00000424833 A0A1B0GUL7 405 aa9.96□□□□□ -0.82
SCN2A-204ENST00000424833 GPTP24298 496 aa9.96□□□□□ -0.82
SCN2A-204ENST00000424833 FOXD4L5Q5VV16 416 aaPredicted RBP9.96□□□□□ -0.82
SCN2A-204ENST00000424833 USPL1Q5W0Q7 1092 aa9.96□□□□□ -0.82
SCN2A-204ENST00000424833 CCDC129Q6ZRS4 1044 aa9.96□□□□□ -0.82
SCN2A-204ENST00000424833 GAS2L3Q86XJ1 694 aa9.96□□□□□ -0.82
SCN2A-204ENST00000424833 MARCH10Q8NA82 808 aaPredicted RBP9.96□□□□□ -0.82
SCN2A-204ENST00000424833 FOXD4L4Q8WXT5 416 aaPredicted RBP9.96□□□□□ -0.82
SCN2A-204ENST00000424833 CCDC85AQ96PX6 553 aaPredicted RBP9.96□□□□□ -0.82
SCN2A-204ENST00000424833 MYH14Q7Z406 1995 aaKnown RBP9.95□□□□□ -0.82
SCN2A-204ENST00000424833 XRCC6P12956 609 aaKnown RBP eCLIP9.95□□□□□ -0.82
SCN2A-204ENST00000424833 ADORA1P30542 326 aa9.95□□□□□ -0.82
SCN2A-204ENST00000424833 KLHL40Q2TBA0 621 aa9.95□□□□□ -0.82
SCN2A-204ENST00000424833 SKOR2Q2VWA4 1001 aaPredicted RBP9.95□□□□□ -0.82
SCN2A-204ENST00000424833 VPS53Q5VIR6 699 aa9.95□□□□□ -0.82
SCN2A-204ENST00000424833 KBTBD3Q8NAB2 608 aa9.95□□□□□ -0.82
SCN2A-204ENST00000424833 LIMCH1Q9UPQ0 1083 aa9.95□□□□□ -0.82
SCN2A-204ENST00000424833 KAT6BQ8WYB5 2073 aa9.95□□□□□ -0.82
SCN2A-204ENST00000424833 DTNBO60941 627 aa9.94□□□□□ -0.82
SCN2A-204ENST00000424833 PTMSP20962 102 aa9.94□□□□□ -0.82
SCN2A-204ENST00000424833 INTS5Q6P9B9 1019 aaKnown RBP9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms