RNA–Protein interactions for RNA: ENST00000424645.5

NCSTN-204, Transcript of nicastrin, humanhuman

TSL 5

Gene NCSTN, Length 958 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-204ENST00000424645 TTLL6Q8N841 843 aa12.82□□□□□ -0.36
NCSTN-204ENST00000424645 USP44Q9H0E7 712 aa12.82□□□□□ -0.36
NCSTN-204ENST00000424645 RTL9Q8NET4 1388 aa12.81□□□□□ -0.36
NCSTN-204ENST00000424645 ABCC12Q96J65 1359 aa12.81□□□□□ -0.36
NCSTN-204ENST00000424645 A0A0G2JLW4 131 aa12.81□□□□□ -0.36
NCSTN-204ENST00000424645 GRIN3BO60391 1043 aa12.81□□□□□ -0.36
NCSTN-204ENST00000424645 BBOX1O75936 387 aa12.81□□□□□ -0.36
NCSTN-204ENST00000424645 CSF1RP07333 972 aa12.81□□□□□ -0.36
NCSTN-204ENST00000424645 HCLS1P14317 486 aaPredicted RBP12.81□□□□□ -0.36
NCSTN-204ENST00000424645 DALRD3Q5D0E6 543 aaKnown RBP12.81□□□□□ -0.36
NCSTN-204ENST00000424645 CC2D2BQ6DHV5 1058 aa12.81□□□□□ -0.36
NCSTN-204ENST00000424645 DDX46Q7L014 1031 aaKnown RBP12.81□□□□□ -0.36
NCSTN-204ENST00000424645 UBTFL1P0CB47 393 aaPredicted RBP12.8□□□□□ -0.36
NCSTN-204ENST00000424645 CTSWP56202 376 aa12.8□□□□□ -0.36
NCSTN-204ENST00000424645 NLGN2Q8NFZ4 835 aa12.8□□□□□ -0.36
NCSTN-204ENST00000424645 ZNF622Q969S3 477 aaKnown RBP eCLIP12.8□□□□□ -0.36
NCSTN-204ENST00000424645 TMX4Q9H1E5 349 aaPredicted RBP12.8□□□□□ -0.36
NCSTN-204ENST00000424645 N4BP2Q86UW6 1770 aaPredicted RBP12.79□□□□□ -0.36
NCSTN-204ENST00000424645 NBPF7P0C2Y1 421 aaPredicted RBP12.79□□□□□ -0.36
NCSTN-204ENST00000424645 CHRNA5P30532 468 aa12.79□□□□□ -0.36
NCSTN-204ENST00000424645 SYNE4Q8N205 404 aa12.79□□□□□ -0.36
NCSTN-204ENST00000424645 CCDC24Q8N4L8 307 aa12.79□□□□□ -0.36
NCSTN-204ENST00000424645 TMEM57Q8N5G2 664 aa12.79□□□□□ -0.36
NCSTN-204ENST00000424645 TTLL11Q8NHH1 800 aa12.79□□□□□ -0.36
NCSTN-204ENST00000424645 CLUAP1Q96AJ1 413 aa12.79□□□□□ -0.36
NCSTN-204ENST00000424645 CDC5LQ99459 802 aaKnown RBP12.79□□□□□ -0.36
NCSTN-204ENST00000424645 DDX19BQ9UMR2 479 aa12.79□□□□□ -0.36
NCSTN-204ENST00000424645 ANKRD31Q8N7Z5 1873 aa12.78□□□□□ -0.36
NCSTN-204ENST00000424645 GRAPQ13588 217 aa12.78□□□□□ -0.36
NCSTN-204ENST00000424645 AAMPQ13685 434 aa12.78□□□□□ -0.36
NCSTN-204ENST00000424645 MVPQ14764 893 aaKnown RBP12.78□□□□□ -0.36
NCSTN-204ENST00000424645 RABL6Q3YEC7 729 aaPredicted RBP12.78□□□□□ -0.36
NCSTN-204ENST00000424645 RTL5Q5HYW3 569 aaPredicted RBP12.78□□□□□ -0.36
NCSTN-204ENST00000424645 GRAPLQ8TC17 118 aaPredicted RBP12.78□□□□□ -0.36
NCSTN-204ENST00000424645 LAMB2P55268 1798 aa12.78□□□□□ -0.36
NCSTN-204ENST00000424645 KIAA1551Q9HCM1 1747 aa12.77□□□□□ -0.36
NCSTN-204ENST00000424645 DLEC1Q9Y238 1755 aa12.77□□□□□ -0.36
NCSTN-204ENST00000424645 ZBTB7BO15156 539 aaPredicted RBP12.77□□□□□ -0.37
NCSTN-204ENST00000424645 RRP1P56182 461 aaKnown RBP12.77□□□□□ -0.37
NCSTN-204ENST00000424645 FOXO4P98177 505 aa12.77□□□□□ -0.37
NCSTN-204ENST00000424645 ITPRIPQ8IWB1 547 aa12.77□□□□□ -0.37
NCSTN-204ENST00000424645 ANKRD18BA2A2Z9 1011 aa12.76□□□□□ -0.37
NCSTN-204ENST00000424645 GNAI2P04899 355 aa12.76□□□□□ -0.37
NCSTN-204ENST00000424645 RPS8P62241 208 aaKnown RBP12.76□□□□□ -0.37
NCSTN-204ENST00000424645 IFIT5Q13325 482 aaKnown RBP12.76□□□□□ -0.37
NCSTN-204ENST00000424645 GPR162Q16538 588 aa12.76□□□□□ -0.37
NCSTN-204ENST00000424645 CCDC57Q2TAC2 916 aa12.76□□□□□ -0.37
NCSTN-204ENST00000424645 PRPF40BQ6NWY9 871 aaKnown RBP12.76□□□□□ -0.37
NCSTN-204ENST00000424645 SP8Q8IXZ3 490 aa12.76□□□□□ -0.37
NCSTN-204ENST00000424645 RTKN2Q8IZC4 609 aa12.76□□□□□ -0.37
NCSTN-204ENST00000424645 BCS1LQ9Y276 419 aa12.76□□□□□ -0.37
NCSTN-204ENST00000424645 DDX60Q8IY21 1712 aaKnown RBP12.76□□□□□ -0.37
NCSTN-204ENST00000424645 RLBP1P12271 317 aa12.75□□□□□ -0.37
NCSTN-204ENST00000424645 MTX1Q13505 466 aa12.75□□□□□ -0.37
NCSTN-204ENST00000424645 LMBR1LQ6UX01 489 aa12.75□□□□□ -0.37
NCSTN-204ENST00000424645 C3orf67Q6ZVT6 689 aa12.75□□□□□ -0.37
NCSTN-204ENST00000424645 ANKRD18AQ8IVF6 992 aa12.75□□□□□ -0.37
NCSTN-204ENST00000424645 C7orf43Q8WVR3 580 aa12.75□□□□□ -0.37
NCSTN-204ENST00000424645 JARID2Q92833 1246 aaPredicted RBP12.75□□□□□ -0.37
NCSTN-204ENST00000424645 SUCLG2Q96I99 432 aa12.75□□□□□ -0.37
NCSTN-204ENST00000424645 FBXO3Q9UK99 471 aa12.75□□□□□ -0.37
NCSTN-204ENST00000424645 ATP6V0A2Q9Y487 856 aa12.75□□□□□ -0.37
NCSTN-204ENST00000424645 TNRC6CQ9HCJ0 1690 aaKnown RBP12.74□□□□□ -0.37
NCSTN-204ENST00000424645 PPEF1O14829 653 aaPredicted RBP12.74□□□□□ -0.37
NCSTN-204ENST00000424645 PLIN1O60240 522 aa12.74□□□□□ -0.37
NCSTN-204ENST00000424645 CENPBP07199 599 aaPredicted RBP12.74□□□□□ -0.37
NCSTN-204ENST00000424645 ITGA6P23229 1130 aa12.74□□□□□ -0.37
NCSTN-204ENST00000424645 IGHMBP2P38935 993 aaKnown RBP12.74□□□□□ -0.37
NCSTN-204ENST00000424645 CCDC93Q567U6 631 aa12.74□□□□□ -0.37
NCSTN-204ENST00000424645 PANK1Q8TE04 598 aa12.74□□□□□ -0.37
NCSTN-204ENST00000424645 KAZALD1Q96I82 304 aa12.74□□□□□ -0.37
NCSTN-204ENST00000424645 MEIS3Q99687 375 aa12.74□□□□□ -0.37
NCSTN-204ENST00000424645 VPS33BQ9H267 617 aa12.74□□□□□ -0.37
NCSTN-204ENST00000424645 GREM2Q9H772 168 aa12.74□□□□□ -0.37
NCSTN-204ENST00000424645 BSDC1Q9NW68 430 aaPredicted RBP12.74□□□□□ -0.37
NCSTN-204ENST00000424645 LTBP3Q9NS15 1303 aa12.73□□□□□ -0.37
NCSTN-204ENST00000424645 MPHOSPH8Q99549 860 aa12.73□□□□□ -0.37
NCSTN-204ENST00000424645 BICC1Q9H694 974 aaKnown RBP12.73□□□□□ -0.37
NCSTN-204ENST00000424645 TNNQ9UQP3 1299 aa12.73□□□□□ -0.37
NCSTN-204ENST00000424645 BRCA1P38398 1863 aaKnown RBP12.73□□□□□ -0.37
NCSTN-204ENST00000424645 COL11A2P13942 1736 aaPredicted RBP12.72□□□□□ -0.37
NCSTN-204ENST00000424645 EPHA10Q5JZY3 1008 aa12.72□□□□□ -0.37
NCSTN-204ENST00000424645 ANKRD44Q8N8A2 993 aa12.72□□□□□ -0.37
NCSTN-204ENST00000424645 SUPT20HQ8NEM7 779 aa12.72□□□□□ -0.37
NCSTN-204ENST00000424645 ZBTB40Q9NUA8 1239 aa12.72□□□□□ -0.37
NCSTN-204ENST00000424645 COG6Q9Y2V7 657 aa12.72□□□□□ -0.37
NCSTN-204ENST00000424645 LRRFIP2Q9Y608 721 aaKnown RBP12.72□□□□□ -0.37
NCSTN-204ENST00000424645 MYH3P11055 1940 aa12.72□□□□□ -0.37
NCSTN-204ENST00000424645 C21orf2O43822 256 aa12.71□□□□□ -0.37
NCSTN-204ENST00000424645 YBX3P16989 372 aaKnown RBP eCLIP12.71□□□□□ -0.373e-7■■■□□ 19
NCSTN-204ENST00000424645 FAM161AQ3B820 660 aa12.71□□□□□ -0.37
NCSTN-204ENST00000424645 TAF7LQ5H9L4 462 aa12.71□□□□□ -0.37
NCSTN-204ENST00000424645 CHRDL2Q6WN34 429 aa12.71□□□□□ -0.37
NCSTN-204ENST00000424645 RPAP2Q8IXW5 612 aaPredicted RBP12.71□□□□□ -0.37
NCSTN-204ENST00000424645 CELF1Q92879 486 aaKnown RBP12.71□□□□□ -0.37
NCSTN-204ENST00000424645 PSMD1Q99460 953 aa12.71□□□□□ -0.37
NCSTN-204ENST00000424645 ANKRD2Q9GZV1 360 aa12.71□□□□□ -0.37
NCSTN-204ENST00000424645 SEC31BQ9NQW1 1179 aa12.71□□□□□ -0.37
NCSTN-204ENST00000424645 CHMP3Q9Y3E7 222 aa12.71□□□□□ -0.37
NCSTN-204ENST00000424645 ARFGEF1Q9Y6D6 1849 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms