RNA–Protein interactions for RNA: ENST00000424393.5

TOP3B-203, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 824 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-203ENST00000424393 PTPRCP08575 1304 aa13.9□□□□□ -0.18
TOP3B-203ENST00000424393 RARSP54136 660 aaKnown RBP13.9□□□□□ -0.18
TOP3B-203ENST00000424393 NMRK2Q9NPI5 230 aa13.9□□□□□ -0.18
TOP3B-203ENST00000424393 PPEF1O14829 653 aaPredicted RBP13.89□□□□□ -0.19
TOP3B-203ENST00000424393 PDE8AO60658 829 aa13.89□□□□□ -0.19
TOP3B-203ENST00000424393 BRPF1P55201 1214 aaPredicted RBP13.89□□□□□ -0.19
TOP3B-203ENST00000424393 CASP7P55210 303 aa13.89□□□□□ -0.19
TOP3B-203ENST00000424393 CCDC93Q567U6 631 aa13.89□□□□□ -0.19
TOP3B-203ENST00000424393 SOGA3Q5TF21 947 aa13.89□□□□□ -0.19
TOP3B-203ENST00000424393 C9orf131Q5VYM1 1079 aa13.89□□□□□ -0.19
TOP3B-203ENST00000424393 SLC4A10Q6U841 1118 aa13.89□□□□□ -0.19
TOP3B-203ENST00000424393 DDX46Q7L014 1031 aaKnown RBP13.89□□□□□ -0.19
TOP3B-203ENST00000424393 UBE3BQ7Z3V4 1068 aa13.89□□□□□ -0.19
TOP3B-203ENST00000424393 LRRC37AA6NMS7 1700 aa13.89□□□□□ -0.19
TOP3B-203ENST00000424393 TIAM2Q8IVF5 1701 aa13.89□□□□□ -0.19
TOP3B-203ENST00000424393 LTBP3Q9NS15 1303 aa13.89□□□□□ -0.19
TOP3B-203ENST00000424393 DICER1Q9UPY3 1922 aaKnown RBP13.88□□□□□ -0.19
TOP3B-203ENST00000424393 WDR90Q96KV7 1748 aa13.88□□□□□ -0.19
TOP3B-203ENST00000424393 GRAPQ13588 217 aa13.88□□□□□ -0.19
TOP3B-203ENST00000424393 GRAPLQ8TC17 118 aaPredicted RBP13.88□□□□□ -0.19
TOP3B-203ENST00000424393 RNF181Q9P0P0 153 aa13.88□□□□□ -0.19
TOP3B-203ENST00000424393 ALDH1L1O75891 902 aa13.87□□□□□ -0.19
TOP3B-203ENST00000424393 HSP90B1P14625 803 aaKnown RBP13.87□□□□□ -0.19
TOP3B-203ENST00000424393 RBM46Q8TBY0 533 aaKnown RBP13.87□□□□□ -0.19
TOP3B-203ENST00000424393 CELF1Q92879 486 aaKnown RBP13.87□□□□□ -0.19
TOP3B-203ENST00000424393 SRCIN1Q9C0H9 1055 aa13.87□□□□□ -0.19
TOP3B-203ENST00000424393 TAOK3Q9H2K8 898 aa13.87□□□□□ -0.19
TOP3B-203ENST00000424393 NOB1Q9ULX3 412 aaKnown RBP13.87□□□□□ -0.19
TOP3B-203ENST00000424393 KDM2BQ8NHM5 1336 aa13.87□□□□□ -0.19
TOP3B-203ENST00000424393 BBOX1O75936 387 aa13.86□□□□□ -0.19
TOP3B-203ENST00000424393 LMNB1P20700 586 aa13.86□□□□□ -0.19
TOP3B-203ENST00000424393 CTSWP56202 376 aa13.86□□□□□ -0.19
TOP3B-203ENST00000424393 HTRA3P83110 453 aa13.86□□□□□ -0.19
TOP3B-203ENST00000424393 FKBP4Q02790 459 aaKnown RBP eCLIP13.86□□□□□ -0.19
TOP3B-203ENST00000424393 CC2D2BQ6DHV5 1058 aa13.86□□□□□ -0.19
TOP3B-203ENST00000424393 TNS4Q8IZW8 715 aa13.86□□□□□ -0.19
TOP3B-203ENST00000424393 DNAJC5GQ8N7S2 189 aa13.86□□□□□ -0.19
TOP3B-203ENST00000424393 TTLL11Q8NHH1 800 aa13.86□□□□□ -0.19
TOP3B-203ENST00000424393 CCDC85AQ96PX6 553 aaPredicted RBP13.86□□□□□ -0.19
TOP3B-203ENST00000424393 PLA2G12BQ9BX93 195 aa13.86□□□□□ -0.19
TOP3B-203ENST00000424393 SEC31BQ9NQW1 1179 aa13.86□□□□□ -0.19
TOP3B-203ENST00000424393 ATP6V0A2Q9Y487 856 aa13.86□□□□□ -0.19
TOP3B-203ENST00000424393 BCAR3O75815 825 aa13.85□□□□□ -0.19
TOP3B-203ENST00000424393 CCDC152Q4G0S7 254 aa13.85□□□□□ -0.19
TOP3B-203ENST00000424393 SP8Q8IXZ3 490 aa13.85□□□□□ -0.19
TOP3B-203ENST00000424393 RTKN2Q8IZC4 609 aa13.85□□□□□ -0.19
TOP3B-203ENST00000424393 KLRG1Q96E93 195 aa13.85□□□□□ -0.19
TOP3B-203ENST00000424393 SPEF2Q9C093 1822 aa13.85□□□□□ -0.19
TOP3B-203ENST00000424393 GRM8O00222 908 aa13.84□□□□□ -0.19
TOP3B-203ENST00000424393 COL13A1Q5TAT6 717 aaPredicted RBP13.84□□□□□ -0.19
TOP3B-203ENST00000424393 PSMD1Q99460 953 aa13.84□□□□□ -0.19
TOP3B-203ENST00000424393 KIF16BQ96L93 1317 aa13.84□□□□□ -0.19
TOP3B-203ENST00000424393 LTBP1Q14766 1721 aa13.84□□□□□ -0.19
TOP3B-203ENST00000424393 RTL9Q8NET4 1388 aa13.83□□□□□ -0.19
TOP3B-203ENST00000424393 DUOX1Q9NRD9 1551 aa13.83□□□□□ -0.19
TOP3B-203ENST00000424393 CSF1RP07333 972 aa13.83□□□□□ -0.2
TOP3B-203ENST00000424393 RPS8P62241 208 aaKnown RBP13.83□□□□□ -0.2
TOP3B-203ENST00000424393 FOXO4P98177 505 aa13.83□□□□□ -0.2
TOP3B-203ENST00000424393 FSTL1Q12841 308 aa13.83□□□□□ -0.2
TOP3B-203ENST00000424393 TMC4Q7Z404 712 aa13.83□□□□□ -0.2
TOP3B-203ENST00000424393 API5Q9BZZ5 524 aaKnown RBP13.83□□□□□ -0.2
TOP3B-203ENST00000424393 GREM2Q9H772 168 aa13.83□□□□□ -0.2
TOP3B-203ENST00000424393 RRAGCQ9HB90 399 aa13.83□□□□□ -0.2
TOP3B-203ENST00000424393 ZNF277Q9NRM2 450 aaPredicted RBP13.83□□□□□ -0.2
TOP3B-203ENST00000424393 C9orf78Q9NZ63 289 aaPredicted RBP13.83□□□□□ -0.2
TOP3B-203ENST00000424393 UTYO14607 1347 aa13.83□□□□□ -0.2
TOP3B-203ENST00000424393 COL4A5P29400 1685 aa13.82□□□□□ -0.2
TOP3B-203ENST00000424393 NBPF7P0C2Y1 421 aaPredicted RBP13.82□□□□□ -0.2
TOP3B-203ENST00000424393 GRIPAP1Q4V328 841 aa13.82□□□□□ -0.2
TOP3B-203ENST00000424393 EPHA10Q5JZY3 1008 aa13.82□□□□□ -0.2
TOP3B-203ENST00000424393 ARHGAP45Q92619 1136 aa13.82□□□□□ -0.2
TOP3B-203ENST00000424393 TNNQ9UQP3 1299 aa13.82□□□□□ -0.2
TOP3B-203ENST00000424393 IARSP41252 1262 aaKnown RBP13.81□□□□□ -0.2
TOP3B-203ENST00000424393 FAM161AQ3B820 660 aa13.81□□□□□ -0.2
TOP3B-203ENST00000424393 KAZALD1Q96I82 304 aa13.81□□□□□ -0.2
TOP3B-203ENST00000424393 SUCLG2Q96I99 432 aa13.81□□□□□ -0.2
TOP3B-203ENST00000424393 USP44Q9H0E7 712 aa13.81□□□□□ -0.2
TOP3B-203ENST00000424393 ZC3H4Q9UPT8 1303 aaKnown RBP13.81□□□□□ -0.2
TOP3B-203ENST00000424393 ITGA6P23229 1130 aa13.8□□□□□ -0.2
TOP3B-203ENST00000424393 CCT4P50991 539 aaKnown RBP13.8□□□□□ -0.2
TOP3B-203ENST00000424393 ANKRD18AQ8IVF6 992 aa13.8□□□□□ -0.2
TOP3B-203ENST00000424393 MPNDQ8N594 471 aa13.8□□□□□ -0.2
TOP3B-203ENST00000424393 FRAT1Q92837 279 aaPredicted RBP13.8□□□□□ -0.2
TOP3B-203ENST00000424393 RTFDC1Q9BY42 306 aaPredicted RBP13.8□□□□□ -0.2
TOP3B-203ENST00000424393 TMX4Q9H1E5 349 aaPredicted RBP13.8□□□□□ -0.2
TOP3B-203ENST00000424393 TRIM27P14373 513 aa13.79□□□□□ -0.2
TOP3B-203ENST00000424393 GPSM2P81274 684 aa13.79□□□□□ -0.2
TOP3B-203ENST00000424393 LMBR1LQ6UX01 489 aa13.79□□□□□ -0.2
TOP3B-203ENST00000424393 DPP8Q6V1X1 898 aaPredicted RBP13.79□□□□□ -0.2
TOP3B-203ENST00000424393 ATF7IPQ6VMQ6 1270 aa13.79□□□□□ -0.2
TOP3B-203ENST00000424393 SMC1BQ8NDV3 1235 aa13.79□□□□□ -0.2
TOP3B-203ENST00000424393 CDC5LQ99459 802 aaKnown RBP13.79□□□□□ -0.2
TOP3B-203ENST00000424393 IPO8O15397 1037 aaKnown RBP13.78□□□□□ -0.2
TOP3B-203ENST00000424393 INTS3Q68E01 1043 aaKnown RBP13.78□□□□□ -0.2
TOP3B-203ENST00000424393 NSFL1CQ9UNZ2 370 aaKnown RBP13.78□□□□□ -0.2
TOP3B-203ENST00000424393 A0A1B0GUL6 1792 aa13.78□□□□□ -0.2
TOP3B-203ENST00000424393 GLTPD2A6NH11 291 aa13.77□□□□□ -0.21
TOP3B-203ENST00000424393 AOC3Q16853 763 aa13.77□□□□□ -0.21
TOP3B-203ENST00000424393 ZKSCAN2Q63HK3 967 aa13.77□□□□□ -0.21
TOP3B-203ENST00000424393 ANKRD44Q8N8A2 993 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms