RNA–Protein interactions for RNA: ENST00000424326.5

SCN7A-203, Transcript of sodium voltage-gated channel alpha subunit 7, humanhuman

TSL 1 (best)

Gene SCN7A, Length 5,337 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN7A-203ENST00000424326 ERVV-1B6SEH8 477 aa9.06□□□□□ -0.96
SCN7A-203ENST00000424326 PCCAP05165 728 aaPredicted RBP9.06□□□□□ -0.96
SCN7A-203ENST00000424326 BAG6P46379 1132 aa9.06□□□□□ -0.96
SCN7A-203ENST00000424326 ZNF622Q969S3 477 aaKnown RBP eCLIP9.06□□□□□ -0.96
SCN7A-203ENST00000424326 LOC102724428A0A0B4J2F2 783 aa9.06□□□□□ -0.96
SCN7A-203ENST00000424326 SIK1P57059 783 aa9.06□□□□□ -0.96
SCN7A-203ENST00000424326 PUM3Q15397 648 aaKnown RBP9.06□□□□□ -0.96
SCN7A-203ENST00000424326 BEND3Q5T5X7 828 aa9.06□□□□□ -0.96
SCN7A-203ENST00000424326 ESYT1Q9BSJ8 1104 aa9.06□□□□□ -0.96
SCN7A-203ENST00000424326 CNNM2Q9H8M5 875 aa9.06□□□□□ -0.96
SCN7A-203ENST00000424326 PAG1Q9NWQ8 432 aa9.06□□□□□ -0.96
SCN7A-203ENST00000424326 NOL7Q9UMY1 257 aaKnown RBP9.06□□□□□ -0.96
SCN7A-203ENST00000424326 LIMCH1Q9UPQ0 1083 aa9.06□□□□□ -0.96
SCN7A-203ENST00000424326 PDE4BQ07343 736 aa9.06□□□□□ -0.96
SCN7A-203ENST00000424326 PLEKHM2Q8IWE5 1019 aa9.06□□□□□ -0.96
SCN7A-203ENST00000424326 TBC1D32Q96NH3 1257 aa9.06□□□□□ -0.96
SCN7A-203ENST00000424326 DENND2AQ9ULE3 1009 aa9.06□□□□□ -0.96
SCN7A-203ENST00000424326 KDM2BQ8NHM5 1336 aa9.05□□□□□ -0.96
SCN7A-203ENST00000424326 CPDO75976 1380 aa9.05□□□□□ -0.96
SCN7A-203ENST00000424326 UBR1Q8IWV7 1749 aa9.05□□□□□ -0.96
SCN7A-203ENST00000424326 PIP4K2AP48426 406 aaPredicted RBP9.05□□□□□ -0.96
SCN7A-203ENST00000424326 IKQ13123 557 aaPredicted RBP9.05□□□□□ -0.96
SCN7A-203ENST00000424326 SOGA3Q5TF21 947 aa9.05□□□□□ -0.96
SCN7A-203ENST00000424326 SSH3Q8TE77 659 aa9.05□□□□□ -0.96
SCN7A-203ENST00000424326 CFAP45Q9UL16 551 aa9.05□□□□□ -0.96
SCN7A-203ENST00000424326 TNNQ9UQP3 1299 aa9.05□□□□□ -0.96
SCN7A-203ENST00000424326 BECN2A8MW95 431 aa9.05□□□□□ -0.96
SCN7A-203ENST00000424326 TPM3P06753 285 aa9.05□□□□□ -0.96
SCN7A-203ENST00000424326 LARP1BQ659C4 914 aaKnown RBP9.05□□□□□ -0.96
SCN7A-203ENST00000424326 TMTC2Q8N394 836 aa9.05□□□□□ -0.96
SCN7A-203ENST00000424326 ZBTB38Q8NAP3 1195 aaPredicted RBP9.05□□□□□ -0.96
SCN7A-203ENST00000424326 ANKRD20A12PQ8NF67 263 aa9.05□□□□□ -0.96
SCN7A-203ENST00000424326 MKNK2Q9HBH9 465 aa9.05□□□□□ -0.96
SCN7A-203ENST00000424326 ITGA6P23229 1130 aa9.05□□□□□ -0.96
SCN7A-203ENST00000424326 TFCP2Q12800 502 aa9.05□□□□□ -0.96
SCN7A-203ENST00000424326 ZSCAN29Q8IWY8 852 aaPredicted RBP9.05□□□□□ -0.96
SCN7A-203ENST00000424326 HELLSQ9NRZ9 838 aa9.05□□□□□ -0.96
SCN7A-203ENST00000424326 PLEKHG2Q9H7P9 1386 aa9.05□□□□□ -0.96
SCN7A-203ENST00000424326 RNF113AO15541 343 aaKnown RBP9.05□□□□□ -0.96
SCN7A-203ENST00000424326 TXLNAP40222 546 aa9.05□□□□□ -0.96
SCN7A-203ENST00000424326 TPD52L1Q16890 204 aaPredicted RBP9.05□□□□□ -0.96
SCN7A-203ENST00000424326 ZNF444Q8N0Y2 327 aaPredicted RBP9.05□□□□□ -0.96
SCN7A-203ENST00000424326 KRT23Q9C075 422 aa9.05□□□□□ -0.96
SCN7A-203ENST00000424326 LRRC7Q96NW7 1537 aa9.04□□□□□ -0.96
SCN7A-203ENST00000424326 C3P01024 1663 aa9.04□□□□□ -0.96
SCN7A-203ENST00000424326 RXRBP28702 533 aa9.04□□□□□ -0.96
SCN7A-203ENST00000424326 KRT85P78386 507 aa9.04□□□□□ -0.96
SCN7A-203ENST00000424326 NCOA7Q8NI08 942 aa9.04□□□□□ -0.96
SCN7A-203ENST00000424326 JARID2Q92833 1246 aaPredicted RBP9.04□□□□□ -0.96
SCN7A-203ENST00000424326 HDAC9Q9UKV0 1011 aa9.04□□□□□ -0.96
SCN7A-203ENST00000424326 USP16Q9Y5T5 823 aa9.04□□□□□ -0.96
SCN7A-203ENST00000424326 SUCLG2Q96I99 432 aa9.04□□□□□ -0.96
SCN7A-203ENST00000424326 NAT10Q9H0A0 1025 aaKnown RBP9.04□□□□□ -0.96
SCN7A-203ENST00000424326 KCNQ3O43525 872 aa9.04□□□□□ -0.96
SCN7A-203ENST00000424326 HLA-DOAP06340 250 aa9.04□□□□□ -0.96
SCN7A-203ENST00000424326 TNNI3KQ59H18 835 aa9.04□□□□□ -0.96
SCN7A-203ENST00000424326 SASS6Q6UVJ0 657 aa9.04□□□□□ -0.96
SCN7A-203ENST00000424326 ATG3Q9NT62 314 aa9.04□□□□□ -0.96
SCN7A-203ENST00000424326 PA2G4Q9UQ80 394 aaKnown RBP9.04□□□□□ -0.96
SCN7A-203ENST00000424326 FPGT-TNNI3KV9GXZ4 949 aa9.04□□□□□ -0.96
SCN7A-203ENST00000424326 FAM89AQ96GI7 184 aa9.04□□□□□ -0.96
SCN7A-203ENST00000424326 USP44Q9H0E7 712 aa9.04□□□□□ -0.96
SCN7A-203ENST00000424326 KIF13AQ9H1H9 1805 aa9.03□□□□□ -0.96
SCN7A-203ENST00000424326 CRACR2BQ8N4Y2 399 aaPredicted RBP9.03□□□□□ -0.96
SCN7A-203ENST00000424326 LPIN2Q92539 896 aa9.03□□□□□ -0.96
SCN7A-203ENST00000424326 MST1RQ04912 1400 aa9.03□□□□□ -0.96
SCN7A-203ENST00000424326 GSE1Q14687 1217 aa9.03□□□□□ -0.96
SCN7A-203ENST00000424326 GIGYF2Q6Y7W6 1299 aaKnown RBP9.03□□□□□ -0.96
SCN7A-203ENST00000424326 KRT27Q7Z3Y8 459 aa9.03□□□□□ -0.96
SCN7A-203ENST00000424326 SUPT20HQ8NEM7 779 aa9.03□□□□□ -0.96
SCN7A-203ENST00000424326 NEK1Q96PY6 1258 aa9.03□□□□□ -0.96
SCN7A-203ENST00000424326 ZC3H12CQ9C0D7 883 aaKnown RBP9.03□□□□□ -0.96
SCN7A-203ENST00000424326 AXIN2Q9Y2T1 843 aa9.03□□□□□ -0.96
SCN7A-203ENST00000424326 APBA3O96018 575 aa9.03□□□□□ -0.96
SCN7A-203ENST00000424326 MYO1BO43795 1136 aa9.03□□□□□ -0.96
SCN7A-203ENST00000424326 DEKP35659 375 aaKnown RBP9.03□□□□□ -0.96
SCN7A-203ENST00000424326 MFSD6Q6ZSS7 791 aa9.03□□□□□ -0.96
SCN7A-203ENST00000424326 TMC4Q7Z404 712 aa9.03□□□□□ -0.96
SCN7A-203ENST00000424326 CTCFLQ8NI51 663 aaPredicted RBP9.03□□□□□ -0.96
SCN7A-203ENST00000424326 NUP133Q8WUM0 1156 aa9.03□□□□□ -0.96
SCN7A-203ENST00000424326 CEP131Q9UPN4 1083 aa9.03□□□□□ -0.96
SCN7A-203ENST00000424326 MINDY4BA8MYZ0 360 aa9.02□□□□□ -0.96
SCN7A-203ENST00000424326 TULP1O00294 542 aaPredicted RBP9.02□□□□□ -0.96
SCN7A-203ENST00000424326 TPM1P09493 284 aa9.02□□□□□ -0.96
SCN7A-203ENST00000424326 ALDH1B1P30837 517 aa9.02□□□□□ -0.96
SCN7A-203ENST00000424326 CTSWP56202 376 aa9.02□□□□□ -0.96
SCN7A-203ENST00000424326 STK38Q15208 465 aa9.02□□□□□ -0.96
SCN7A-203ENST00000424326 NAA16Q6N069 864 aaPredicted RBP9.02□□□□□ -0.96
SCN7A-203ENST00000424326 GPR108Q9NPR9 543 aa9.02□□□□□ -0.96
SCN7A-203ENST00000424326 CIAO1O76071 339 aa9.02□□□□□ -0.97
SCN7A-203ENST00000424326 NBPF7P0C2Y1 421 aaPredicted RBP9.02□□□□□ -0.97
SCN7A-203ENST00000424326 KIF5BP33176 963 aa9.02□□□□□ -0.97
SCN7A-203ENST00000424326 TICAM2Q86XR7 235 aa9.02□□□□□ -0.97
SCN7A-203ENST00000424326 SLC12A7Q9Y666 1083 aa9.02□□□□□ -0.97
SCN7A-203ENST00000424326 MAST3O60307 1309 aa9.02□□□□□ -0.97
SCN7A-203ENST00000424326 KIF1AQ12756 1690 aa9.02□□□□□ -0.97
SCN7A-203ENST00000424326 CYP27B1O15528 508 aa9.02□□□□□ -0.97
SCN7A-203ENST00000424326 MCM5P33992 734 aa9.02□□□□□ -0.97
SCN7A-203ENST00000424326 CRKLP46109 303 aaKnown RBP9.02□□□□□ -0.97
SCN7A-203ENST00000424326 VPS72Q15906 364 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms