RNA–Protein interactions for RNA: ENST00000424234.6

ACTN4-203, Transcript of actinin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ACTN4, Length 1,566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-203ENST00000424234 PARP3Q9Y6F1 533 aa17.5■□□□□ 0.39
ACTN4-203ENST00000424234 KAZALD1Q96I82 304 aa17.49■□□□□ 0.39
ACTN4-203ENST00000424234 LRRFIP2Q9Y608 721 aaKnown RBP17.49■□□□□ 0.39
ACTN4-203ENST00000424234 TPTE2Q6XPS3 522 aa17.49■□□□□ 0.39
ACTN4-203ENST00000424234 SGIP1Q9BQI5 828 aa17.49■□□□□ 0.39
ACTN4-203ENST00000424234 DAXXQ9UER7 740 aaPredicted RBP17.49■□□□□ 0.39
ACTN4-203ENST00000424234 ATF5Q9Y2D1 282 aaPredicted RBP17.49■□□□□ 0.39
ACTN4-203ENST00000424234 LRRC37AA6NMS7 1700 aa17.48■□□□□ 0.39
ACTN4-203ENST00000424234 IRS4O14654 1257 aaPredicted RBP17.48■□□□□ 0.39
ACTN4-203ENST00000424234 CCDC24Q8N4L8 307 aa17.48■□□□□ 0.39
ACTN4-203ENST00000424234 PLA2G12BQ9BX93 195 aa17.48■□□□□ 0.39
ACTN4-203ENST00000424234 NPHP1O15259 732 aa17.47■□□□□ 0.39
ACTN4-203ENST00000424234 GNAI2P04899 355 aa17.47■□□□□ 0.39
ACTN4-203ENST00000424234 HCLS1P14317 486 aaPredicted RBP17.47■□□□□ 0.39
ACTN4-203ENST00000424234 GTF2E1P29083 439 aaPredicted RBP17.47■□□□□ 0.39
ACTN4-203ENST00000424234 NBR1Q14596 966 aa17.47■□□□□ 0.39
ACTN4-203ENST00000424234 EPHA10Q5JZY3 1008 aa17.47■□□□□ 0.39
ACTN4-203ENST00000424234 SMC5Q8IY18 1101 aa17.47■□□□□ 0.39
ACTN4-203ENST00000424234 BICC1Q9H694 974 aaKnown RBP17.47■□□□□ 0.39
ACTN4-203ENST00000424234 PTGER2P43116 358 aa17.46■□□□□ 0.39
ACTN4-203ENST00000424234 ST5P78524 1137 aa17.46■□□□□ 0.39
ACTN4-203ENST00000424234 ANKRD44Q8N8A2 993 aa17.46■□□□□ 0.39
ACTN4-203ENST00000424234 PDE8AO60658 829 aa17.45■□□□□ 0.38
ACTN4-203ENST00000424234 FOXO4P98177 505 aa17.45■□□□□ 0.38
ACTN4-203ENST00000424234 SLC10A5Q5PT55 438 aa17.45■□□□□ 0.38
ACTN4-203ENST00000424234 C3orf67Q6ZVT6 689 aa17.45■□□□□ 0.38
ACTN4-203ENST00000424234 SLX4Q8IY92 1834 aa17.45■□□□□ 0.38
ACTN4-203ENST00000424234 ARFGEF1Q9Y6D6 1849 aa17.45■□□□□ 0.38
ACTN4-203ENST00000424234 POLD1P28340 1107 aa17.45■□□□□ 0.38
ACTN4-203ENST00000424234 CTSWP56202 376 aa17.45■□□□□ 0.38
ACTN4-203ENST00000424234 RABL6Q3YEC7 729 aaPredicted RBP17.45■□□□□ 0.38
ACTN4-203ENST00000424234 HDAC5Q9UQL6 1122 aa17.44■□□□□ 0.38
ACTN4-203ENST00000424234 HSP90B1P14625 803 aaKnown RBP17.43■□□□□ 0.38
ACTN4-203ENST00000424234 CEP85Q6P2H3 762 aa17.43■□□□□ 0.38
ACTN4-203ENST00000424234 UPF2Q9HAU5 1272 aaKnown RBP17.43■□□□□ 0.38
ACTN4-203ENST00000424234 RTL9Q8NET4 1388 aa17.42■□□□□ 0.38
ACTN4-203ENST00000424234 MTX1Q13505 466 aa17.42■□□□□ 0.38
ACTN4-203ENST00000424234 SPON1Q9HCB6 807 aa17.42■□□□□ 0.38
ACTN4-203ENST00000424234 LMBR1LQ6UX01 489 aa17.41■□□□□ 0.38
ACTN4-203ENST00000424234 TTLL11Q8NHH1 800 aa17.41■□□□□ 0.38
ACTN4-203ENST00000424234 LTBP1Q14766 1721 aa17.41■□□□□ 0.38
ACTN4-203ENST00000424234 ARAP2Q8WZ64 1704 aa17.41■□□□□ 0.38
ACTN4-203ENST00000424234 PNMA6EA0A0J9YXQ4 647 aa17.4■□□□□ 0.38
ACTN4-203ENST00000424234 CSF1RP07333 972 aa17.4■□□□□ 0.38
ACTN4-203ENST00000424234 CRY2Q49AN0 593 aa17.4■□□□□ 0.38
ACTN4-203ENST00000424234 BRIP1Q9BX63 1249 aa17.4■□□□□ 0.38
ACTN4-203ENST00000424234 SEC24BO95487 1268 aa17.4■□□□□ 0.38
ACTN4-203ENST00000424234 NUCB1Q02818 461 aa17.4■□□□□ 0.38
ACTN4-203ENST00000424234 SF3B3Q15393 1217 aaKnown RBP17.4■□□□□ 0.38
ACTN4-203ENST00000424234 SIRT2Q8IXJ6 389 aa17.4■□□□□ 0.38
ACTN4-203ENST00000424234 NLRP3Q96P20 1036 aa17.4■□□□□ 0.38
ACTN4-203ENST00000424234 CCDC85AQ96PX6 553 aaPredicted RBP17.4■□□□□ 0.38
ACTN4-203ENST00000424234 GREM2Q9H772 168 aa17.4■□□□□ 0.38
ACTN4-203ENST00000424234 KLRG2A4D1S0 409 aaPredicted RBP17.39■□□□□ 0.37
ACTN4-203ENST00000424234 CCDC152Q4G0S7 254 aa17.39■□□□□ 0.37
ACTN4-203ENST00000424234 GCC1Q96CN9 775 aa17.39■□□□□ 0.37
ACTN4-203ENST00000424234 CHMP3Q9Y3E7 222 aa17.39■□□□□ 0.37
ACTN4-203ENST00000424234 MYH13Q9UKX3 1938 aa17.39■□□□□ 0.37
ACTN4-203ENST00000424234 SRGAP3O43295 1099 aa17.38■□□□□ 0.37
ACTN4-203ENST00000424234 ATP8B2P98198 1209 aa17.38■□□□□ 0.37
ACTN4-203ENST00000424234 RPAP2Q8IXW5 612 aaPredicted RBP17.38■□□□□ 0.37
ACTN4-203ENST00000424234 PDE6BP35913 854 aa17.37■□□□□ 0.37
ACTN4-203ENST00000424234 POLA2Q14181 598 aa17.37■□□□□ 0.37
ACTN4-203ENST00000424234 SSH3Q8TE77 659 aa17.37■□□□□ 0.37
ACTN4-203ENST00000424234 CCDC88AQ3V6T2 1871 aa17.37■□□□□ 0.37
ACTN4-203ENST00000424234 ITGA6P23229 1130 aa17.36■□□□□ 0.37
ACTN4-203ENST00000424234 RFX5P48382 616 aaPredicted RBP17.36■□□□□ 0.37
ACTN4-203ENST00000424234 BECN1Q14457 450 aa17.36■□□□□ 0.37
ACTN4-203ENST00000424234 TBC1D32Q96NH3 1257 aa17.36■□□□□ 0.37
ACTN4-203ENST00000424234 FER1L6Q2WGJ9 1857 aa17.36■□□□□ 0.37
ACTN4-203ENST00000424234 SEC31BQ9NQW1 1179 aa17.36■□□□□ 0.37
ACTN4-203ENST00000424234 SRGNP10124 158 aa17.35■□□□□ 0.37
ACTN4-203ENST00000424234 SLC4A3P48751 1232 aa17.35■□□□□ 0.37
ACTN4-203ENST00000424234 IFIT5Q13325 482 aaKnown RBP17.35■□□□□ 0.37
ACTN4-203ENST00000424234 CHD1LQ86WJ1 897 aa17.35■□□□□ 0.37
ACTN4-203ENST00000424234 KLHDC4Q8TBB5 520 aa17.35■□□□□ 0.37
ACTN4-203ENST00000424234 RPGRQ92834 1020 aaKnown RBP17.35■□□□□ 0.37
ACTN4-203ENST00000424234 HMMRO75330 724 aa17.34■□□□□ 0.37
ACTN4-203ENST00000424234 CCDC57Q2TAC2 916 aa17.34■□□□□ 0.37
ACTN4-203ENST00000424234 C2CD5Q86YS7 1000 aa17.34■□□□□ 0.37
ACTN4-203ENST00000424234 ANKRD18BA2A2Z9 1011 aa17.33■□□□□ 0.37
ACTN4-203ENST00000424234 CHRNA5P30532 468 aa17.33■□□□□ 0.37
ACTN4-203ENST00000424234 HOXA10P31260 410 aaPredicted RBP17.33■□□□□ 0.37
ACTN4-203ENST00000424234 PTPN12Q05209 780 aaKnown RBP17.33■□□□□ 0.37
ACTN4-203ENST00000424234 ZNF594Q96JF6 807 aaPredicted RBP17.33■□□□□ 0.37
ACTN4-203ENST00000424234 PA2G4Q9UQ80 394 aaKnown RBP17.33■□□□□ 0.37
ACTN4-203ENST00000424234 NPR1P16066 1061 aa17.32■□□□□ 0.36
ACTN4-203ENST00000424234 DEKP35659 375 aaKnown RBP17.32■□□□□ 0.36
ACTN4-203ENST00000424234 DDX46Q7L014 1031 aaKnown RBP17.32■□□□□ 0.36
ACTN4-203ENST00000424234 CELF1Q92879 486 aaKnown RBP17.32■□□□□ 0.36
ACTN4-203ENST00000424234 MASTLQ96GX5 879 aa17.32■□□□□ 0.36
ACTN4-203ENST00000424234 COPRSQ9NQ92 184 aa17.32■□□□□ 0.36
ACTN4-203ENST00000424234 CD2APQ9Y5K6 639 aa17.32■□□□□ 0.36
ACTN4-203ENST00000424234 H0YIN7 160 aa17.32■□□□□ 0.36
ACTN4-203ENST00000424234 KLHL34Q8N239 644 aa17.32■□□□□ 0.36
ACTN4-203ENST00000424234 RBM17Q96I25 401 aaKnown RBP17.32■□□□□ 0.36
ACTN4-203ENST00000424234 CDC5LQ99459 802 aaKnown RBP17.32■□□□□ 0.36
ACTN4-203ENST00000424234 AK9Q5TCS8 1911 aa17.31■□□□□ 0.36
ACTN4-203ENST00000424234 GRAPQ13588 217 aa17.31■□□□□ 0.36
ACTN4-203ENST00000424234 TAF7LQ5H9L4 462 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms