RNA–Protein interactions for RNA: ENST00000423998.1

GTF3C2-204, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 5

Gene GTF3C2, Length 828 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-204ENST00000423998 RPS8P62241 208 aaKnown RBP17.34■□□□□ 0.37
GTF3C2-204ENST00000423998 INTS3Q68E01 1043 aaKnown RBP17.34■□□□□ 0.37
GTF3C2-204ENST00000423998 VPS33BQ9H267 617 aa17.34■□□□□ 0.37
GTF3C2-204ENST00000423998 UTYO14607 1347 aa17.33■□□□□ 0.36
GTF3C2-204ENST00000423998 CCDC57Q2TAC2 916 aa17.33■□□□□ 0.36
GTF3C2-204ENST00000423998 ANKRD18AQ8IVF6 992 aa17.33■□□□□ 0.36
GTF3C2-204ENST00000423998 SYNE4Q8N205 404 aa17.33■□□□□ 0.36
GTF3C2-204ENST00000423998 TTLL11Q8NHH1 800 aa17.33■□□□□ 0.36
GTF3C2-204ENST00000423998 WWC3Q9ULE0 1092 aa17.33■□□□□ 0.36
GTF3C2-204ENST00000423998 ATP6V0A2Q9Y487 856 aa17.33■□□□□ 0.36
GTF3C2-204ENST00000423998 N4BP2Q86UW6 1770 aaPredicted RBP17.33■□□□□ 0.36
GTF3C2-204ENST00000423998 RTL9Q8NET4 1388 aa17.32■□□□□ 0.36
GTF3C2-204ENST00000423998 LTBP3Q9NS15 1303 aa17.32■□□□□ 0.36
GTF3C2-204ENST00000423998 ANKRD18BA2A2Z9 1011 aa17.32■□□□□ 0.36
GTF3C2-204ENST00000423998 UBTFL1P0CB47 393 aaPredicted RBP17.32■□□□□ 0.36
GTF3C2-204ENST00000423998 LMNB1P20700 586 aa17.32■□□□□ 0.36
GTF3C2-204ENST00000423998 IGHMBP2P38935 993 aaKnown RBP17.32■□□□□ 0.36
GTF3C2-204ENST00000423998 IFIT5Q13325 482 aaKnown RBP17.32■□□□□ 0.36
GTF3C2-204ENST00000423998 DZIP1LQ8IYY4 767 aaKnown RBP17.32■□□□□ 0.36
GTF3C2-204ENST00000423998 TAOK3Q9H2K8 898 aa17.32■□□□□ 0.36
GTF3C2-204ENST00000423998 ABCC4O15439 1325 aa17.31■□□□□ 0.36
GTF3C2-204ENST00000423998 ZC3H4Q9UPT8 1303 aaKnown RBP17.31■□□□□ 0.36
GTF3C2-204ENST00000423998 CSF1RP07333 972 aa17.31■□□□□ 0.36
GTF3C2-204ENST00000423998 TRIM27P14373 513 aa17.31■□□□□ 0.36
GTF3C2-204ENST00000423998 TAF7LQ5H9L4 462 aa17.31■□□□□ 0.36
GTF3C2-204ENST00000423998 MPHOSPH8Q99549 860 aa17.31■□□□□ 0.36
GTF3C2-204ENST00000423998 C7orf43Q8WVR3 580 aa17.3■□□□□ 0.36
GTF3C2-204ENST00000423998 PSMD1Q99460 953 aa17.3■□□□□ 0.36
GTF3C2-204ENST00000423998 USP44Q9H0E7 712 aa17.3■□□□□ 0.36
GTF3C2-204ENST00000423998 ANKRD31Q8N7Z5 1873 aa17.29■□□□□ 0.36
GTF3C2-204ENST00000423998 CASP7P55210 303 aa17.29■□□□□ 0.36
GTF3C2-204ENST00000423998 FKBP4Q02790 459 aaKnown RBP eCLIP17.29■□□□□ 0.36
GTF3C2-204ENST00000423998 MPNDQ8N594 471 aa17.29■□□□□ 0.36
GTF3C2-204ENST00000423998 BSDC1Q9NW68 430 aaPredicted RBP17.29■□□□□ 0.36
GTF3C2-204ENST00000423998 ZNF219Q9P2Y4 722 aaPredicted RBP17.29■□□□□ 0.36
GTF3C2-204ENST00000423998 CHMP3Q9Y3E7 222 aa17.29■□□□□ 0.36
GTF3C2-204ENST00000423998 DLEC1Q9Y238 1755 aa17.29■□□□□ 0.36
GTF3C2-204ENST00000423998 ITGA6P23229 1130 aa17.28■□□□□ 0.36
GTF3C2-204ENST00000423998 DPP8Q6V1X1 898 aaPredicted RBP17.28■□□□□ 0.36
GTF3C2-204ENST00000423998 JARID2Q92833 1246 aaPredicted RBP17.28■□□□□ 0.36
GTF3C2-204ENST00000423998 ANKRD2Q9GZV1 360 aa17.28■□□□□ 0.36
GTF3C2-204ENST00000423998 KIAA1551Q9HCM1 1747 aa17.27■□□□□ 0.36
GTF3C2-204ENST00000423998 ARFGEF1Q9Y6D6 1849 aa17.27■□□□□ 0.36
GTF3C2-204ENST00000423998 NBPF7P0C2Y1 421 aaPredicted RBP17.27■□□□□ 0.36
GTF3C2-204ENST00000423998 YY1P25490 414 aa17.27■□□□□ 0.36
GTF3C2-204ENST00000423998 PDE3AQ14432 1141 aa17.27■□□□□ 0.36
GTF3C2-204ENST00000423998 DPY19L2Q6NUT2 758 aa17.27■□□□□ 0.36
GTF3C2-204ENST00000423998 LMBR1LQ6UX01 489 aa17.27■□□□□ 0.36
GTF3C2-204ENST00000423998 C3orf67Q6ZVT6 689 aa17.27■□□□□ 0.36
GTF3C2-204ENST00000423998 JDP2Q8WYK2 163 aa17.27■□□□□ 0.36
GTF3C2-204ENST00000423998 EYA3Q99504 573 aa17.27■□□□□ 0.36
GTF3C2-204ENST00000423998 FOXO4P98177 505 aa17.26■□□□□ 0.35
GTF3C2-204ENST00000423998 CLUAP1Q96AJ1 413 aa17.26■□□□□ 0.35
GTF3C2-204ENST00000423998 GREM2Q9H772 168 aa17.26■□□□□ 0.35
GTF3C2-204ENST00000423998 ANKIB1Q9P2G1 1089 aa17.26■□□□□ 0.35
GTF3C2-204ENST00000423998 NSFL1CQ9UNZ2 370 aaKnown RBP17.26■□□□□ 0.35
GTF3C2-204ENST00000423998 BRCA1P38398 1863 aaKnown RBP17.26■□□□□ 0.35
GTF3C2-204ENST00000423998 GNAI2P04899 355 aa17.25■□□□□ 0.35
GTF3C2-204ENST00000423998 CELF1Q92879 486 aaKnown RBP17.25■□□□□ 0.35
GTF3C2-204ENST00000423998 RNF181Q9P0P0 153 aa17.25■□□□□ 0.35
GTF3C2-204ENST00000423998 RABL6Q3YEC7 729 aaPredicted RBP17.24■□□□□ 0.35
GTF3C2-204ENST00000423998 C9orf131Q5VYM1 1079 aa17.24■□□□□ 0.35
GTF3C2-204ENST00000423998 ITPRIPQ8IWB1 547 aa17.24■□□□□ 0.35
GTF3C2-204ENST00000423998 CCDC85AQ96PX6 553 aaPredicted RBP17.24■□□□□ 0.35
GTF3C2-204ENST00000423998 RTFDC1Q9BY42 306 aaPredicted RBP17.24■□□□□ 0.35
GTF3C2-204ENST00000423998 PODXL2Q9NZ53 605 aa17.24■□□□□ 0.35
GTF3C2-204ENST00000423998 FBXO3Q9UK99 471 aa17.24■□□□□ 0.35
GTF3C2-204ENST00000423998 DDX19BQ9UMR2 479 aa17.24■□□□□ 0.35
GTF3C2-204ENST00000423998 G3V3G9 751 aa17.23■□□□□ 0.35
GTF3C2-204ENST00000423998 ATP2B4P23634 1241 aa17.23■□□□□ 0.35
GTF3C2-204ENST00000423998 DCAF8Q5TAQ9 597 aa17.23■□□□□ 0.35
GTF3C2-204ENST00000423998 LDHAL6AQ6ZMR3 332 aa17.23■□□□□ 0.35
GTF3C2-204ENST00000423998 SUCLG2Q96I99 432 aa17.23■□□□□ 0.35
GTF3C2-204ENST00000423998 ZC3H12CQ9C0D7 883 aaKnown RBP17.23■□□□□ 0.35
GTF3C2-204ENST00000423998 BICC1Q9H694 974 aaKnown RBP17.23■□□□□ 0.35
GTF3C2-204ENST00000423998 SEC31BQ9NQW1 1179 aa17.23■□□□□ 0.35
GTF3C2-204ENST00000423998 XDHP47989 1333 aa17.22■□□□□ 0.35
GTF3C2-204ENST00000423998 C6orf229H3BNL8 230 aa17.22■□□□□ 0.35
GTF3C2-204ENST00000423998 NFKBIEO00221 500 aa17.22■□□□□ 0.35
GTF3C2-204ENST00000423998 IARSP41252 1262 aaKnown RBP17.22■□□□□ 0.35
GTF3C2-204ENST00000423998 FAM161AQ3B820 660 aa17.22■□□□□ 0.35
GTF3C2-204ENST00000423998 TMEM57Q8N5G2 664 aa17.22■□□□□ 0.35
GTF3C2-204ENST00000423998 CNNM1Q9NRU3 951 aa17.22■□□□□ 0.35
GTF3C2-204ENST00000423998 GGA1Q9UJY5 639 aa17.22■□□□□ 0.35
GTF3C2-204ENST00000423998 LEMD3Q9Y2U8 911 aa17.22■□□□□ 0.35
GTF3C2-204ENST00000423998 LAMB2P55268 1798 aa17.22■□□□□ 0.35
GTF3C2-204ENST00000423998 KDM2BQ8NHM5 1336 aa17.21■□□□□ 0.35
GTF3C2-204ENST00000423998 COL11A2P13942 1736 aaPredicted RBP17.21■□□□□ 0.35
GTF3C2-204ENST00000423998 TNRC6CQ9HCJ0 1690 aaKnown RBP17.21■□□□□ 0.35
GTF3C2-204ENST00000423998 KCNJ4P48050 445 aa17.21■□□□□ 0.35
GTF3C2-204ENST00000423998 WASHC4Q2M389 1173 aa17.21■□□□□ 0.35
GTF3C2-204ENST00000423998 LARGE2Q8N3Y3 721 aa17.21■□□□□ 0.35
GTF3C2-204ENST00000423998 CHD4Q14839 1912 aa17.21■□□□□ 0.35
GTF3C2-204ENST00000423998 SLX4Q8IY92 1834 aa17.21■□□□□ 0.35
GTF3C2-204ENST00000423998 DDX60Q8IY21 1712 aaKnown RBP17.21■□□□□ 0.35
GTF3C2-204ENST00000423998 EIF6P56537 245 aaKnown RBP17.2■□□□□ 0.34
GTF3C2-204ENST00000423998 NIM1KQ8IY84 436 aa17.2■□□□□ 0.34
GTF3C2-204ENST00000423998 MINPP1Q9UNW1 487 aa17.2■□□□□ 0.34
GTF3C2-204ENST00000423998 MROH5Q6ZUA9 1318 aa17.2■□□□□ 0.34
GTF3C2-204ENST00000423998 PPIP5K2O43314 1243 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms