RNA–Protein interactions for RNA: ENST00000423960.1

FOXN4-203, Transcript of forkhead box N4, humanhuman

TSL 1 (best)

Gene FOXN4, Length 1,219 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4-203ENST00000423960 RRP1P56182 461 aaKnown RBP21.39■■□□□ 1.01
FOXN4-203ENST00000423960 ITPRIPQ8IWB1 547 aa21.39■■□□□ 1.01
FOXN4-203ENST00000423960 RBM17Q96I25 401 aaKnown RBP21.39■■□□□ 1.01
FOXN4-203ENST00000423960 ALDH1B1P30837 517 aa21.38■■□□□ 1.01
FOXN4-203ENST00000423960 CTSWP56202 376 aa21.38■■□□□ 1.01
FOXN4-203ENST00000423960 CCDC152Q4G0S7 254 aa21.38■■□□□ 1.01
FOXN4-203ENST00000423960 TTLL6Q8N841 843 aa21.38■■□□□ 1.01
FOXN4-203ENST00000423960 CNKSR1Q969H4 720 aa21.38■■□□□ 1.01
FOXN4-203ENST00000423960 HDAC5Q9UQL6 1122 aa21.38■■□□□ 1.01
FOXN4-203ENST00000423960 ANKRD31Q8N7Z5 1873 aa21.38■■□□□ 1.01
FOXN4-203ENST00000423960 GNAI3P08754 354 aa21.37■■□□□ 1.01
FOXN4-203ENST00000423960 UBTFL1P0CB47 393 aaPredicted RBP21.37■■□□□ 1.01
FOXN4-203ENST00000423960 FOXO4P98177 505 aa21.37■■□□□ 1.01
FOXN4-203ENST00000423960 C20orf194Q5TEA3 1177 aa21.37■■□□□ 1.01
FOXN4-203ENST00000423960 DDX46Q7L014 1031 aaKnown RBP21.37■■□□□ 1.01
FOXN4-203ENST00000423960 TTLL11Q8NHH1 800 aa21.37■■□□□ 1.01
FOXN4-203ENST00000423960 SUCLG2Q96I99 432 aa21.37■■□□□ 1.01
FOXN4-203ENST00000423960 CRAMP1Q96RY5 1269 aa21.37■■□□□ 1.01
FOXN4-203ENST00000423960 MEIS3Q99687 375 aa21.37■■□□□ 1.01
FOXN4-203ENST00000423960 CSF1RP07333 972 aa21.36■■□□□ 1.01
FOXN4-203ENST00000423960 EPHA10Q5JZY3 1008 aa21.35■■□□□ 1.01
FOXN4-203ENST00000423960 KAZALD1Q96I82 304 aa21.35■■□□□ 1.01
FOXN4-203ENST00000423960 CCDC85AQ96PX6 553 aaPredicted RBP21.35■■□□□ 1.01
FOXN4-203ENST00000423960 GPBP1L1Q9HC44 474 aaPredicted RBP21.35■■□□□ 1.01
FOXN4-203ENST00000423960 COG6Q9Y2V7 657 aa21.35■■□□□ 1.01
FOXN4-203ENST00000423960 SUPT16HQ9Y5B9 1047 aaKnown RBP21.35■■□□□ 1.01
FOXN4-203ENST00000423960 TNRC6CQ9HCJ0 1690 aaKnown RBP21.34■■□□□ 1.01
FOXN4-203ENST00000423960 ZBTB7BO15156 539 aaPredicted RBP21.34■■□□□ 1.01
FOXN4-203ENST00000423960 MVPQ14764 893 aaKnown RBP21.34■■□□□ 1.01
FOXN4-203ENST00000423960 LMBR1LQ6UX01 489 aa21.34■■□□□ 1.01
FOXN4-203ENST00000423960 DDX60Q8IY21 1712 aaKnown RBP21.33■■□□□ 1.01
FOXN4-203ENST00000423960 C1QTNF8P60827 252 aa21.33■■□□□ 1.01
FOXN4-203ENST00000423960 BICC1Q9H694 974 aaKnown RBP21.33■■□□□ 1.01
FOXN4-203ENST00000423960 BRCA1P38398 1863 aaKnown RBP21.32■■□□□ 1
FOXN4-203ENST00000423960 C9orf131Q5VYM1 1079 aa21.32■■□□□ 1
FOXN4-203ENST00000423960 PRPF40BQ6NWY9 871 aaKnown RBP21.32■■□□□ 1
FOXN4-203ENST00000423960 GREM2Q9H772 168 aa21.32■■□□□ 1
FOXN4-203ENST00000423960 SEC31BQ9NQW1 1179 aa21.32■■□□□ 1
FOXN4-203ENST00000423960 CHMP3Q9Y3E7 222 aa21.32■■□□□ 1
FOXN4-203ENST00000423960 BBOX1O75936 387 aa21.31■■□□□ 1
FOXN4-203ENST00000423960 GNAI2P04899 355 aa21.31■■□□□ 1
FOXN4-203ENST00000423960 GRAPQ13588 217 aa21.31■■□□□ 1
FOXN4-203ENST00000423960 GRAPLQ8TC17 118 aaPredicted RBP21.31■■□□□ 1
FOXN4-203ENST00000423960 DDX19BQ9UMR2 479 aa21.31■■□□□ 1
FOXN4-203ENST00000423960 LRRFIP2Q9Y608 721 aaKnown RBP21.31■■□□□ 1
FOXN4-203ENST00000423960 RPS8P62241 208 aaKnown RBP21.3■■□□□ 1
FOXN4-203ENST00000423960 RABL6Q3YEC7 729 aaPredicted RBP21.3■■□□□ 1
FOXN4-203ENST00000423960 ANKRD44Q8N8A2 993 aa21.3■■□□□ 1
FOXN4-203ENST00000423960 CHMP4BQ9H444 224 aaKnown RBP21.3■■□□□ 1
FOXN4-203ENST00000423960 ZNF219Q9P2Y4 722 aaPredicted RBP21.3■■□□□ 1
FOXN4-203ENST00000423960 RTL9Q8NET4 1388 aa21.29■■□□□ 1
FOXN4-203ENST00000423960 ITGA6P23229 1130 aa21.29■■□□□ 1
FOXN4-203ENST00000423960 RASSF7Q02833 373 aa21.29■■□□□ 1
FOXN4-203ENST00000423960 IFIT5Q13325 482 aaKnown RBP21.29■■□□□ 1
FOXN4-203ENST00000423960 FAM161AQ3B820 660 aa21.29■■□□□ 1
FOXN4-203ENST00000423960 CELF1Q92879 486 aaKnown RBP21.29■■□□□ 1
FOXN4-203ENST00000423960 CDC5LQ99459 802 aaKnown RBP21.29■■□□□ 1
FOXN4-203ENST00000423960 COL11A2P13942 1736 aaPredicted RBP21.29■■□□□ 1
FOXN4-203ENST00000423960 LAMB2P55268 1798 aa21.28■■□□□ 1
FOXN4-203ENST00000423960 ANKRD18BA2A2Z9 1011 aa21.28■■□□□ 1
FOXN4-203ENST00000423960 C21orf2O43822 256 aa21.28■■□□□ 1
FOXN4-203ENST00000423960 CCDC57Q2TAC2 916 aa21.28■■□□□ 1
FOXN4-203ENST00000423960 C7orf43Q8WVR3 580 aa21.28■■□□□ 1
FOXN4-203ENST00000423960 RNF181Q9P0P0 153 aa21.28■■□□□ 1
FOXN4-203ENST00000423960 PPEF1O14829 653 aaPredicted RBP21.27■■□□□ 1
FOXN4-203ENST00000423960 CENPBP07199 599 aaPredicted RBP21.27■■□□□ 1
FOXN4-203ENST00000423960 ANKRD18AQ8IVF6 992 aa21.27■■□□□ 1
FOXN4-203ENST00000423960 TMC4Q7Z404 712 aa21.26■□□□□ 0.99
FOXN4-203ENST00000423960 TMX4Q9H1E5 349 aaPredicted RBP21.26■□□□□ 0.99
FOXN4-203ENST00000423960 ARFGEF1Q9Y6D6 1849 aa21.26■□□□□ 0.99
FOXN4-203ENST00000423960 DLEC1Q9Y238 1755 aa21.25■□□□□ 0.99
FOXN4-203ENST00000423960 IGHMBP2P38935 993 aaKnown RBP21.25■□□□□ 0.99
FOXN4-203ENST00000423960 SOGA3Q5TF21 947 aa21.25■□□□□ 0.99
FOXN4-203ENST00000423960 SP8Q8IXZ3 490 aa21.25■□□□□ 0.99
FOXN4-203ENST00000423960 ZBTB40Q9NUA8 1239 aa21.25■□□□□ 0.99
FOXN4-203ENST00000423960 ATP6V0A2Q9Y487 856 aa21.25■□□□□ 0.99
FOXN4-203ENST00000423960 TAF7LQ5H9L4 462 aa21.24■□□□□ 0.99
FOXN4-203ENST00000423960 CC2D2BQ6DHV5 1058 aa21.24■□□□□ 0.99
FOXN4-203ENST00000423960 C1orf115Q9H7X2 142 aa21.24■□□□□ 0.99
FOXN4-203ENST00000423960 PRELPP51888 382 aa21.23■□□□□ 0.99
FOXN4-203ENST00000423960 CRBNQ96SW2 442 aa21.23■□□□□ 0.99
FOXN4-203ENST00000423960 MPHOSPH8Q99549 860 aa21.23■□□□□ 0.99
FOXN4-203ENST00000423960 BSDC1Q9NW68 430 aaPredicted RBP21.23■□□□□ 0.99
FOXN4-203ENST00000423960 SLX4Q8IY92 1834 aa21.22■□□□□ 0.99
FOXN4-203ENST00000423960 NFKBIEO00221 500 aa21.22■□□□□ 0.99
FOXN4-203ENST00000423960 CCDC93Q567U6 631 aa21.22■□□□□ 0.99
FOXN4-203ENST00000423960 OLFM4Q6UX06 510 aa21.22■□□□□ 0.99
FOXN4-203ENST00000423960 MYH3P11055 1940 aa21.21■□□□□ 0.99
FOXN4-203ENST00000423960 KIF3CO14782 793 aa21.21■□□□□ 0.99
FOXN4-203ENST00000423960 MTX1Q13505 466 aa21.21■□□□□ 0.99
FOXN4-203ENST00000423960 GRIPAP1Q4V328 841 aa21.21■□□□□ 0.99
FOXN4-203ENST00000423960 RTKN2Q8IZC4 609 aa21.21■□□□□ 0.99
FOXN4-203ENST00000423960 ZNF594Q96JF6 807 aaPredicted RBP21.21■□□□□ 0.99
FOXN4-203ENST00000423960 SRGAP3O43295 1099 aa21.2■□□□□ 0.98
FOXN4-203ENST00000423960 LMNB1P20700 586 aa21.2■□□□□ 0.98
FOXN4-203ENST00000423960 ATP8B2P98198 1209 aa21.2■□□□□ 0.98
FOXN4-203ENST00000423960 LDHAL6AQ6ZMR3 332 aa21.2■□□□□ 0.98
FOXN4-203ENST00000423960 NMRK2Q9NPI5 230 aa21.2■□□□□ 0.98
FOXN4-203ENST00000423960 RFX5P48382 616 aaPredicted RBP21.19■□□□□ 0.98
FOXN4-203ENST00000423960 SLC51AQ86UW1 340 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms