RNA–Protein interactions for RNA: ENST00000423941.5

HDAC6-205, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-205ENST00000423941 TRIM27P14373 513 aa23.37■■□□□ 1.33
HDAC6-205ENST00000423941 CTSWP56202 376 aa23.37■■□□□ 1.33
HDAC6-205ENST00000423941 ATF7IPQ6VMQ6 1270 aa23.37■■□□□ 1.33
HDAC6-205ENST00000423941 ARHGAP27Q6ZUM4 889 aa23.37■■□□□ 1.33
HDAC6-205ENST00000423941 DDX46Q7L014 1031 aaKnown RBP23.37■■□□□ 1.33
HDAC6-205ENST00000423941 USP44Q9H0E7 712 aa23.37■■□□□ 1.33
HDAC6-205ENST00000423941 COL4A1P02462 1669 aa23.37■■□□□ 1.33
HDAC6-205ENST00000423941 RTL9Q8NET4 1388 aa23.37■■□□□ 1.33
HDAC6-205ENST00000423941 CCT4P50991 539 aaKnown RBP23.36■■□□□ 1.33
HDAC6-205ENST00000423941 GRAPQ13588 217 aa23.36■■□□□ 1.33
HDAC6-205ENST00000423941 SOGA3Q5TF21 947 aa23.36■■□□□ 1.33
HDAC6-205ENST00000423941 INTS3Q68E01 1043 aaKnown RBP23.36■■□□□ 1.33
HDAC6-205ENST00000423941 GRAPLQ8TC17 118 aaPredicted RBP23.36■■□□□ 1.33
HDAC6-205ENST00000423941 LTBP3Q9NS15 1303 aa23.35■■□□□ 1.33
HDAC6-205ENST00000423941 NFKBIEO00221 500 aa23.35■■□□□ 1.33
HDAC6-205ENST00000423941 FOXO4P98177 505 aa23.35■■□□□ 1.33
HDAC6-205ENST00000423941 CC2D2BQ6DHV5 1058 aa23.35■■□□□ 1.33
HDAC6-205ENST00000423941 LRRC37AA6NMS7 1700 aa23.34■■□□□ 1.33
HDAC6-205ENST00000423941 NBPF7P0C2Y1 421 aaPredicted RBP23.34■■□□□ 1.33
HDAC6-205ENST00000423941 CCDC152Q4G0S7 254 aa23.34■■□□□ 1.33
HDAC6-205ENST00000423941 KAZALD1Q96I82 304 aa23.34■■□□□ 1.33
HDAC6-205ENST00000423941 C9orf78Q9NZ63 289 aaPredicted RBP23.34■■□□□ 1.33
HDAC6-205ENST00000423941 ATP6V0A2Q9Y487 856 aa23.34■■□□□ 1.33
HDAC6-205ENST00000423941 CCDC88AQ3V6T2 1871 aa23.34■■□□□ 1.33
HDAC6-205ENST00000423941 ZKSCAN2Q63HK3 967 aa23.33■■□□□ 1.33
HDAC6-205ENST00000423941 TMC4Q7Z404 712 aa23.33■■□□□ 1.33
HDAC6-205ENST00000423941 CELF1Q92879 486 aaKnown RBP23.33■■□□□ 1.33
HDAC6-205ENST00000423941 SEC31BQ9NQW1 1179 aa23.33■■□□□ 1.33
HDAC6-205ENST00000423941 TNNQ9UQP3 1299 aa23.33■■□□□ 1.33
HDAC6-205ENST00000423941 PPEF1O14829 653 aaPredicted RBP23.32■■□□□ 1.32
HDAC6-205ENST00000423941 PRELPP51888 382 aa23.32■■□□□ 1.32
HDAC6-205ENST00000423941 GRIPAP1Q4V328 841 aa23.32■■□□□ 1.32
HDAC6-205ENST00000423941 CCDC93Q567U6 631 aa23.32■■□□□ 1.32
HDAC6-205ENST00000423941 EPHA10Q5JZY3 1008 aa23.32■■□□□ 1.32
HDAC6-205ENST00000423941 OLFM4Q6UX06 510 aa23.32■■□□□ 1.32
HDAC6-205ENST00000423941 SP8Q8IXZ3 490 aa23.32■■□□□ 1.32
HDAC6-205ENST00000423941 FRAT1Q92837 279 aaPredicted RBP23.32■■□□□ 1.32
HDAC6-205ENST00000423941 RCAN3Q9UKA8 241 aa23.32■■□□□ 1.32
HDAC6-205ENST00000423941 RPS8P62241 208 aaKnown RBP23.31■■□□□ 1.32
HDAC6-205ENST00000423941 RTKN2Q8IZC4 609 aa23.31■■□□□ 1.32
HDAC6-205ENST00000423941 ZNF219Q9P2Y4 722 aaPredicted RBP23.31■■□□□ 1.32
HDAC6-205ENST00000423941 DICER1Q9UPY3 1922 aaKnown RBP23.31■■□□□ 1.32
HDAC6-205ENST00000423941 SLC51AQ86UW1 340 aa23.3■■□□□ 1.32
HDAC6-205ENST00000423941 YTHDC1Q96MU7 727 aaKnown RBP23.3■■□□□ 1.32
HDAC6-205ENST00000423941 GREM2Q9H772 168 aa23.3■■□□□ 1.32
HDAC6-205ENST00000423941 SUCLG2Q96I99 432 aa23.29■■□□□ 1.32
HDAC6-205ENST00000423941 RASSF7Q02833 373 aa23.28■■□□□ 1.32
HDAC6-205ENST00000423941 RABL6Q3YEC7 729 aaPredicted RBP23.28■■□□□ 1.32
HDAC6-205ENST00000423941 PSMD1Q99460 953 aa23.28■■□□□ 1.32
HDAC6-205ENST00000423941 LMNB1P20700 586 aa23.27■■□□□ 1.32
HDAC6-205ENST00000423941 FKBP4Q02790 459 aaKnown RBP eCLIP23.27■■□□□ 1.32
HDAC6-205ENST00000423941 LTBP1Q14766 1721 aa23.27■■□□□ 1.32
HDAC6-205ENST00000423941 LMBR1LQ6UX01 489 aa23.26■■□□□ 1.31
HDAC6-205ENST00000423941 CCDC85AQ96PX6 553 aaPredicted RBP23.26■■□□□ 1.31
HDAC6-205ENST00000423941 CDC5LQ99459 802 aaKnown RBP23.26■■□□□ 1.31
HDAC6-205ENST00000423941 RTFDC1Q9BY42 306 aaPredicted RBP23.26■■□□□ 1.31
HDAC6-205ENST00000423941 TAOK3Q9H2K8 898 aa23.26■■□□□ 1.31
HDAC6-205ENST00000423941 ITGA6P23229 1130 aa23.25■■□□□ 1.31
HDAC6-205ENST00000423941 FAM161AQ3B820 660 aa23.25■■□□□ 1.31
HDAC6-205ENST00000423941 ANKRD44Q8N8A2 993 aa23.25■■□□□ 1.31
HDAC6-205ENST00000423941 CLUAP1Q96AJ1 413 aa23.25■■□□□ 1.31
HDAC6-205ENST00000423941 RLBP1P12271 317 aa23.24■■□□□ 1.31
HDAC6-205ENST00000423941 C9orf131Q5VYM1 1079 aa23.24■■□□□ 1.31
HDAC6-205ENST00000423941 ANKRD18AQ8IVF6 992 aa23.24■■□□□ 1.31
HDAC6-205ENST00000423941 DZIP1LQ8IYY4 767 aaKnown RBP23.24■■□□□ 1.31
HDAC6-205ENST00000423941 BICC1Q9H694 974 aaKnown RBP23.24■■□□□ 1.31
HDAC6-205ENST00000423941 BSDC1Q9NW68 430 aaPredicted RBP23.24■■□□□ 1.31
HDAC6-205ENST00000423941 DUOX1Q9NRD9 1551 aa23.23■■□□□ 1.31
HDAC6-205ENST00000423941 YY1P25490 414 aa23.23■■□□□ 1.31
HDAC6-205ENST00000423941 TMEM57Q8N5G2 664 aa23.23■■□□□ 1.31
HDAC6-205ENST00000423941 MEIS3Q99687 375 aa23.23■■□□□ 1.31
HDAC6-205ENST00000423941 SPEF2Q9C093 1822 aa23.23■■□□□ 1.31
HDAC6-205ENST00000423941 VPS33BQ9H267 617 aa23.22■■□□□ 1.31
HDAC6-205ENST00000423941 PODXL2Q9NZ53 605 aa23.22■■□□□ 1.31
HDAC6-205ENST00000423941 ANKRD18BA2A2Z9 1011 aa23.21■■□□□ 1.31
HDAC6-205ENST00000423941 UBTFL1P0CB47 393 aaPredicted RBP23.21■■□□□ 1.31
HDAC6-205ENST00000423941 IFIT5Q13325 482 aaKnown RBP23.21■■□□□ 1.31
HDAC6-205ENST00000423941 MPNDQ8N594 471 aa23.21■■□□□ 1.31
HDAC6-205ENST00000423941 TMX4Q9H1E5 349 aaPredicted RBP23.21■■□□□ 1.31
HDAC6-205ENST00000423941 RNF181Q9P0P0 153 aa23.21■■□□□ 1.31
HDAC6-205ENST00000423941 ZC3H4Q9UPT8 1303 aaKnown RBP23.21■■□□□ 1.31
HDAC6-205ENST00000423941 GNAI3P08754 354 aa23.2■■□□□ 1.3
HDAC6-205ENST00000423941 HDAC5Q9UQL6 1122 aa23.2■■□□□ 1.3
HDAC6-205ENST00000423941 ZNF277Q9NRM2 450 aaPredicted RBP23.19■■□□□ 1.3
HDAC6-205ENST00000423941 MINPP1Q9UNW1 487 aa23.19■■□□□ 1.3
HDAC6-205ENST00000423941 ZBTB7BO15156 539 aaPredicted RBP23.18■■□□□ 1.3
HDAC6-205ENST00000423941 MS4A1P11836 297 aa23.18■■□□□ 1.3
HDAC6-205ENST00000423941 GPSM2P81274 684 aa23.18■■□□□ 1.3
HDAC6-205ENST00000423941 CCDC57Q2TAC2 916 aa23.18■■□□□ 1.3
HDAC6-205ENST00000423941 DPP8Q6V1X1 898 aaPredicted RBP23.18■■□□□ 1.3
HDAC6-205ENST00000423941 SUPT20HQ8NEM7 779 aa23.18■■□□□ 1.3
HDAC6-205ENST00000423941 TIAM2Q8IVF5 1701 aa23.18■■□□□ 1.3
HDAC6-205ENST00000423941 COL4A5P29400 1685 aa23.17■■□□□ 1.3
HDAC6-205ENST00000423941 IGHMBP2P38935 993 aaKnown RBP23.17■■□□□ 1.3
HDAC6-205ENST00000423941 IARSP41252 1262 aaKnown RBP23.17■■□□□ 1.3
HDAC6-205ENST00000423941 FTSJ3Q8IY81 847 aaKnown RBP23.17■■□□□ 1.3
HDAC6-205ENST00000423941 POLLQ9UGP5 575 aa23.17■■□□□ 1.3
HDAC6-205ENST00000423941 PLIN1O60240 522 aa23.16■■□□□ 1.3
HDAC6-205ENST00000423941 RFX5P48382 616 aaPredicted RBP23.16■■□□□ 1.3
HDAC6-205ENST00000423941 PANK1Q8TE04 598 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms