RNA–Protein interactions for RNA: ENST00000423615.6

VNN3-206, Transcript of vanin 3, humanhuman

TSL 1 (best) BASIC

Gene VNN3, Length 1,021 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VNN3-206ENST00000423615 ERFEQ4G0M1 354 aa12.99□□□□□ -0.33
VNN3-206ENST00000423615 COL23A1Q86Y22 540 aaPredicted RBP12.99□□□□□ -0.33
VNN3-206ENST00000423615 OTUD7AQ8TE49 926 aaPredicted RBP12.99□□□□□ -0.33
VNN3-206ENST00000423615 LRRCC1Q9C099 1032 aa12.99□□□□□ -0.33
VNN3-206ENST00000423615 BCL11AQ9H165 835 aa12.99□□□□□ -0.33
VNN3-206ENST00000423615 NOP58Q9Y2X3 529 aaKnown RBP12.99□□□□□ -0.33
VNN3-206ENST00000423615 PDE8AO60658 829 aa12.98□□□□□ -0.33
VNN3-206ENST00000423615 PTPN12Q05209 780 aaKnown RBP12.98□□□□□ -0.33
VNN3-206ENST00000423615 OS9Q13438 667 aaPredicted RBP12.98□□□□□ -0.33
VNN3-206ENST00000423615 NFIXQ14938 502 aa12.98□□□□□ -0.33
VNN3-206ENST00000423615 ILDR2Q71H61 639 aa12.98□□□□□ -0.33
VNN3-206ENST00000423615 COPRSQ9NQ92 184 aa12.98□□□□□ -0.33
VNN3-206ENST00000423615 DLEC1Q9Y238 1755 aa12.97□□□□□ -0.33
VNN3-206ENST00000423615 RTL9Q8NET4 1388 aa12.97□□□□□ -0.33
VNN3-206ENST00000423615 SALL3Q9BXA9 1300 aa12.97□□□□□ -0.33
VNN3-206ENST00000423615 RAB11FIP3O75154 756 aa12.97□□□□□ -0.33
VNN3-206ENST00000423615 CSF1RP07333 972 aa12.97□□□□□ -0.33
VNN3-206ENST00000423615 DDR1Q08345 913 aa12.97□□□□□ -0.33
VNN3-206ENST00000423615 NBPF5PQ86XG9 351 aaPredicted RBP12.97□□□□□ -0.33
VNN3-206ENST00000423615 RHPN1Q8TCX5 695 aa12.97□□□□□ -0.33
VNN3-206ENST00000423615 KIF1BPQ96EK5 621 aa12.97□□□□□ -0.33
VNN3-206ENST00000423615 ZNF594Q96JF6 807 aaPredicted RBP12.97□□□□□ -0.33
VNN3-206ENST00000423615 SETDB2Q96T68 719 aa12.97□□□□□ -0.33
VNN3-206ENST00000423615 NYXQ9GZU5 481 aa12.97□□□□□ -0.33
VNN3-206ENST00000423615 GREM2Q9H772 168 aa12.97□□□□□ -0.33
VNN3-206ENST00000423615 IL1RAPL2Q9NP60 686 aa12.97□□□□□ -0.33
VNN3-206ENST00000423615 ZBTB47Q9UFB7 747 aaPredicted RBP12.97□□□□□ -0.33
VNN3-206ENST00000423615 MSH5O43196 834 aa12.96□□□□□ -0.33
VNN3-206ENST00000423615 SLC15A2Q16348 729 aa12.96□□□□□ -0.33
VNN3-206ENST00000423615 HSP90AB4PQ58FF6 505 aa12.96□□□□□ -0.33
VNN3-206ENST00000423615 C3orf67Q6ZVT6 689 aa12.96□□□□□ -0.33
VNN3-206ENST00000423615 C16orf71Q8IYS4 520 aaPredicted RBP12.96□□□□□ -0.33
VNN3-206ENST00000423615 TTLL11Q8NHH1 800 aa12.96□□□□□ -0.33
VNN3-206ENST00000423615 STK32BQ9NY57 414 aa12.96□□□□□ -0.33
VNN3-206ENST00000423615 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.96□□□□□ -0.33
VNN3-206ENST00000423615 SASH1O94885 1247 aa12.95□□□□□ -0.34
VNN3-206ENST00000423615 ITGA6P23229 1130 aa12.95□□□□□ -0.34
VNN3-206ENST00000423615 ERC1Q8IUD2 1116 aa12.95□□□□□ -0.34
VNN3-206ENST00000423615 CCDC24Q8N4L8 307 aa12.95□□□□□ -0.34
VNN3-206ENST00000423615 CNBD1Q8NA66 436 aa12.95□□□□□ -0.34
VNN3-206ENST00000423615 FLAD1Q8NFF5 587 aa12.95□□□□□ -0.34
VNN3-206ENST00000423615 POLRMTO00411 1230 aaKnown RBP12.94□□□□□ -0.34
VNN3-206ENST00000423615 G3BP1Q13283 466 aaKnown RBP eCLIP12.94□□□□□ -0.34
VNN3-206ENST00000423615 IFIT5Q13325 482 aaKnown RBP12.94□□□□□ -0.34
VNN3-206ENST00000423615 CCDC57Q2TAC2 916 aa12.94□□□□□ -0.34
VNN3-206ENST00000423615 MSL1Q68DK7 614 aa12.94□□□□□ -0.34
VNN3-206ENST00000423615 PRR5LQ6MZQ0 368 aa12.94□□□□□ -0.34
VNN3-206ENST00000423615 ATG9AQ7Z3C6 839 aa12.94□□□□□ -0.34
VNN3-206ENST00000423615 PLEKHM2Q8IWE5 1019 aa12.94□□□□□ -0.34
VNN3-206ENST00000423615 MYH13Q9UKX3 1938 aa12.94□□□□□ -0.34
VNN3-206ENST00000423615 KIAA1551Q9HCM1 1747 aa12.93□□□□□ -0.34
VNN3-206ENST00000423615 KIF13BQ9NQT8 1826 aa12.93□□□□□ -0.34
VNN3-206ENST00000423615 ANKRD18BA2A2Z9 1011 aa12.93□□□□□ -0.34
VNN3-206ENST00000423615 EYA2O00167 538 aa12.93□□□□□ -0.34
VNN3-206ENST00000423615 TM4SF1P30408 202 aa12.93□□□□□ -0.34
VNN3-206ENST00000423615 LRRC24Q50LG9 513 aa12.93□□□□□ -0.34
VNN3-206ENST00000423615 TAF7LQ5H9L4 462 aa12.93□□□□□ -0.34
VNN3-206ENST00000423615 TSHZ3Q63HK5 1081 aa12.93□□□□□ -0.34
VNN3-206ENST00000423615 PUS3Q9BZE2 481 aaKnown RBP12.93□□□□□ -0.34
VNN3-206ENST00000423615 LTBP1Q14766 1721 aa12.93□□□□□ -0.34
VNN3-206ENST00000423615 NPHP1O15259 732 aa12.92□□□□□ -0.34
VNN3-206ENST00000423615 SERPINB2P05120 415 aa12.92□□□□□ -0.34
VNN3-206ENST00000423615 HSP90B1P14625 803 aaKnown RBP12.92□□□□□ -0.34
VNN3-206ENST00000423615 GSPT1P15170 499 aaKnown RBP12.92□□□□□ -0.34
VNN3-206ENST00000423615 MX1P20591 662 aa12.92□□□□□ -0.34
VNN3-206ENST00000423615 GTF2E1P29083 439 aaPredicted RBP12.92□□□□□ -0.34
VNN3-206ENST00000423615 TFCP2Q12800 502 aa12.92□□□□□ -0.34
VNN3-206ENST00000423615 CCDC152Q4G0S7 254 aa12.92□□□□□ -0.34
VNN3-206ENST00000423615 SEC31BQ9NQW1 1179 aa12.92□□□□□ -0.34
VNN3-206ENST00000423615 TLR7Q9NYK1 1049 aaKnown RBP12.92□□□□□ -0.34
VNN3-206ENST00000423615 CIAO1O76071 339 aa12.91□□□□□ -0.34
VNN3-206ENST00000423615 IL15P40933 162 aaPredicted RBP12.91□□□□□ -0.34
VNN3-206ENST00000423615 C8orf34Q49A92 452 aa12.91□□□□□ -0.34
VNN3-206ENST00000423615 SLC10A5Q5PT55 438 aa12.91□□□□□ -0.34
VNN3-206ENST00000423615 TTC22Q5TAA0 569 aa12.91□□□□□ -0.34
VNN3-206ENST00000423615 TPTE2Q6XPS3 522 aa12.91□□□□□ -0.34
VNN3-206ENST00000423615 AACSQ86V21 672 aa12.91□□□□□ -0.34
VNN3-206ENST00000423615 CCDC125Q86Z20 511 aa12.91□□□□□ -0.34
VNN3-206ENST00000423615 AOX1Q06278 1338 aa12.9□□□□□ -0.34
VNN3-206ENST00000423615 MYH7P12883 1935 aa12.9□□□□□ -0.34
VNN3-206ENST00000423615 MMP10P09238 476 aa12.9□□□□□ -0.34
VNN3-206ENST00000423615 PDE1AP54750 535 aa12.9□□□□□ -0.34
VNN3-206ENST00000423615 ST5P78524 1137 aa12.9□□□□□ -0.34
VNN3-206ENST00000423615 SF3B3Q15393 1217 aaKnown RBP12.9□□□□□ -0.34
VNN3-206ENST00000423615 TNNI3KQ59H18 835 aa12.9□□□□□ -0.34
VNN3-206ENST00000423615 CLASRPQ8N2M8 674 aaKnown RBP12.9□□□□□ -0.34
VNN3-206ENST00000423615 PDGFDQ9GZP0 370 aaPredicted RBP12.9□□□□□ -0.34
VNN3-206ENST00000423615 FPGT-TNNI3KV9GXZ4 949 aa12.9□□□□□ -0.34
VNN3-206ENST00000423615 C10orf71Q711Q0 1435 aa12.89□□□□□ -0.35
VNN3-206ENST00000423615 BMP2KLQ5H9B9 411 aa12.89□□□□□ -0.35
VNN3-206ENST00000423615 NLGN1Q8N2Q7 840 aa12.89□□□□□ -0.35
VNN3-206ENST00000423615 UPF1Q92900 1129 aaKnown RBP eCLIP12.89□□□□□ -0.35
VNN3-206ENST00000423615 EAF2Q96CJ1 260 aaPredicted RBP12.89□□□□□ -0.35
VNN3-206ENST00000423615 FBXO3Q9UK99 471 aa12.89□□□□□ -0.35
VNN3-206ENST00000423615 DOCK2Q92608 1830 aa12.89□□□□□ -0.35
VNN3-206ENST00000423615 AKAP11Q9UKA4 1901 aa12.88□□□□□ -0.35
VNN3-206ENST00000423615 IFIT2P09913 472 aaKnown RBP12.88□□□□□ -0.35
VNN3-206ENST00000423615 LDHAL6AQ6ZMR3 332 aa12.88□□□□□ -0.35
VNN3-206ENST00000423615 PI4K2BQ8TCG2 481 aa12.88□□□□□ -0.35
VNN3-206ENST00000423615 NLRP3Q96P20 1036 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms