RNA–Protein interactions for RNA: ENST00000422877.1

SEC23B-205, Transcript of Sec23 homolog B, coat complex II component, humanhuman

TSL 3

Gene SEC23B, Length 834 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23B-205ENST00000422877 TMC4Q7Z404 712 aa17.57■□□□□ 0.4
SEC23B-205ENST00000422877 PLA2G12BQ9BX93 195 aa17.57■□□□□ 0.4
SEC23B-205ENST00000422877 A0A1B0GUL6 1792 aa17.57■□□□□ 0.4
SEC23B-205ENST00000422877 RTL9Q8NET4 1388 aa17.56■□□□□ 0.4
SEC23B-205ENST00000422877 PPEF1O14829 653 aaPredicted RBP17.56■□□□□ 0.4
SEC23B-205ENST00000422877 BBOX1O75936 387 aa17.56■□□□□ 0.4
SEC23B-205ENST00000422877 CASP7P55210 303 aa17.56■□□□□ 0.4
SEC23B-205ENST00000422877 GRAPQ13588 217 aa17.56■□□□□ 0.4
SEC23B-205ENST00000422877 RTKN2Q8IZC4 609 aa17.56■□□□□ 0.4
SEC23B-205ENST00000422877 GRAPLQ8TC17 118 aaPredicted RBP17.56■□□□□ 0.4
SEC23B-205ENST00000422877 SRCIN1Q9C0H9 1055 aa17.56■□□□□ 0.4
SEC23B-205ENST00000422877 TAOK3Q9H2K8 898 aa17.56■□□□□ 0.4
SEC23B-205ENST00000422877 COL4A1P02462 1669 aa17.55■□□□□ 0.4
SEC23B-205ENST00000422877 LMNB1P20700 586 aa17.55■□□□□ 0.4
SEC23B-205ENST00000422877 CCDC152Q4G0S7 254 aa17.55■□□□□ 0.4
SEC23B-205ENST00000422877 UBE3BQ7Z3V4 1068 aa17.55■□□□□ 0.4
SEC23B-205ENST00000422877 ARHGAP45Q92619 1136 aa17.55■□□□□ 0.4
SEC23B-205ENST00000422877 GRM8O00222 908 aa17.54■□□□□ 0.4
SEC23B-205ENST00000422877 CTSWP56202 376 aa17.54■□□□□ 0.4
SEC23B-205ENST00000422877 RASSF7Q02833 373 aa17.54■□□□□ 0.4
SEC23B-205ENST00000422877 SLC4A10Q6U841 1118 aa17.54■□□□□ 0.4
SEC23B-205ENST00000422877 PSMD1Q99460 953 aa17.54■□□□□ 0.4
SEC23B-205ENST00000422877 ZNF219Q9P2Y4 722 aaPredicted RBP17.54■□□□□ 0.4
SEC23B-205ENST00000422877 ATP6V0A2Q9Y487 856 aa17.54■□□□□ 0.4
SEC23B-205ENST00000422877 FKBP4Q02790 459 aaKnown RBP eCLIP17.53■□□□□ 0.4
SEC23B-205ENST00000422877 C9orf131Q5VYM1 1079 aa17.53■□□□□ 0.4
SEC23B-205ENST00000422877 API5Q9BZZ5 524 aaKnown RBP17.53■□□□□ 0.4
SEC23B-205ENST00000422877 TMX4Q9H1E5 349 aaPredicted RBP17.53■□□□□ 0.4
SEC23B-205ENST00000422877 UTYO14607 1347 aa17.52■□□□□ 0.4
SEC23B-205ENST00000422877 SP8Q8IXZ3 490 aa17.52■□□□□ 0.4
SEC23B-205ENST00000422877 TTLL11Q8NHH1 800 aa17.52■□□□□ 0.4
SEC23B-205ENST00000422877 RNF181Q9P0P0 153 aa17.52■□□□□ 0.4
SEC23B-205ENST00000422877 NOB1Q9ULX3 412 aaKnown RBP17.52■□□□□ 0.4
SEC23B-205ENST00000422877 DUOX1Q9NRD9 1551 aa17.52■□□□□ 0.39
SEC23B-205ENST00000422877 IPO8O15397 1037 aaKnown RBP17.51■□□□□ 0.39
SEC23B-205ENST00000422877 JARID2Q92833 1246 aaPredicted RBP17.51■□□□□ 0.39
SEC23B-205ENST00000422877 C9orf78Q9NZ63 289 aaPredicted RBP17.51■□□□□ 0.39
SEC23B-205ENST00000422877 PSME4Q14997 1843 aa17.5■□□□□ 0.39
SEC23B-205ENST00000422877 CSF1RP07333 972 aa17.5■□□□□ 0.39
SEC23B-205ENST00000422877 CCT4P50991 539 aaKnown RBP17.5■□□□□ 0.39
SEC23B-205ENST00000422877 PRELPP51888 382 aa17.5■□□□□ 0.39
SEC23B-205ENST00000422877 ZNF784Q8NCA9 323 aaPredicted RBP17.5■□□□□ 0.39
SEC23B-205ENST00000422877 CELF1Q92879 486 aaKnown RBP17.5■□□□□ 0.39
SEC23B-205ENST00000422877 CDC5LQ99459 802 aaKnown RBP17.5■□□□□ 0.39
SEC23B-205ENST00000422877 RPS8P62241 208 aaKnown RBP17.49■□□□□ 0.39
SEC23B-205ENST00000422877 OLFM4Q6UX06 510 aa17.49■□□□□ 0.39
SEC23B-205ENST00000422877 VPS33BQ9H267 617 aa17.49■□□□□ 0.39
SEC23B-205ENST00000422877 SCN4AP35499 1836 aa17.49■□□□□ 0.39
SEC23B-205ENST00000422877 WDR90Q96KV7 1748 aa17.48■□□□□ 0.39
SEC23B-205ENST00000422877 RTFDC1Q9BY42 306 aaPredicted RBP17.48■□□□□ 0.39
SEC23B-205ENST00000422877 SEC31BQ9NQW1 1179 aa17.48■□□□□ 0.39
SEC23B-205ENST00000422877 BCAR3O75815 825 aa17.47■□□□□ 0.39
SEC23B-205ENST00000422877 ATF7IPQ6VMQ6 1270 aa17.47■□□□□ 0.39
SEC23B-205ENST00000422877 ANKRD18AQ8IVF6 992 aa17.47■□□□□ 0.39
SEC23B-205ENST00000422877 SUPT20HQ8NEM7 779 aa17.47■□□□□ 0.39
SEC23B-205ENST00000422877 GREM2Q9H772 168 aa17.47■□□□□ 0.39
SEC23B-205ENST00000422877 NBPF7P0C2Y1 421 aaPredicted RBP17.46■□□□□ 0.39
SEC23B-205ENST00000422877 IARSP41252 1262 aaKnown RBP17.46■□□□□ 0.39
SEC23B-205ENST00000422877 FOXO4P98177 505 aa17.46■□□□□ 0.39
SEC23B-205ENST00000422877 MPNDQ8N594 471 aa17.46■□□□□ 0.39
SEC23B-205ENST00000422877 TRIM27P14373 513 aa17.45■□□□□ 0.38
SEC23B-205ENST00000422877 INTS3Q68E01 1043 aaKnown RBP17.45■□□□□ 0.38
SEC23B-205ENST00000422877 DPP8Q6V1X1 898 aaPredicted RBP17.45■□□□□ 0.38
SEC23B-205ENST00000422877 CCDC85AQ96PX6 553 aaPredicted RBP17.45■□□□□ 0.38
SEC23B-205ENST00000422877 USP44Q9H0E7 712 aa17.45■□□□□ 0.38
SEC23B-205ENST00000422877 ITGA6P23229 1130 aa17.44■□□□□ 0.38
SEC23B-205ENST00000422877 FAM161AQ3B820 660 aa17.44■□□□□ 0.38
SEC23B-205ENST00000422877 IFFO2Q5TF58 517 aa17.44■□□□□ 0.38
SEC23B-205ENST00000422877 ZKSCAN2Q63HK3 967 aa17.44■□□□□ 0.38
SEC23B-205ENST00000422877 ZNF277Q9NRM2 450 aaPredicted RBP17.44■□□□□ 0.38
SEC23B-205ENST00000422877 BSDC1Q9NW68 430 aaPredicted RBP17.44■□□□□ 0.38
SEC23B-205ENST00000422877 PODXL2Q9NZ53 605 aa17.44■□□□□ 0.38
SEC23B-205ENST00000422877 COL4A5P29400 1685 aa17.44■□□□□ 0.38
SEC23B-205ENST00000422877 KDM2BQ8NHM5 1336 aa17.44■□□□□ 0.38
SEC23B-205ENST00000422877 ANKRD18BA2A2Z9 1011 aa17.43■□□□□ 0.38
SEC23B-205ENST00000422877 IGHMBP2P38935 993 aaKnown RBP17.43■□□□□ 0.38
SEC23B-205ENST00000422877 RABL6Q3YEC7 729 aaPredicted RBP17.43■□□□□ 0.38
SEC23B-205ENST00000422877 SLC51AQ86UW1 340 aa17.43■□□□□ 0.38
SEC23B-205ENST00000422877 FRAT1Q92837 279 aaPredicted RBP17.43■□□□□ 0.38
SEC23B-205ENST00000422877 KAZALD1Q96I82 304 aa17.43■□□□□ 0.38
SEC23B-205ENST00000422877 SUCLG2Q96I99 432 aa17.43■□□□□ 0.38
SEC23B-205ENST00000422877 HDAC5Q9UQL6 1122 aa17.43■□□□□ 0.38
SEC23B-205ENST00000422877 IFIT5Q13325 482 aaKnown RBP17.42■□□□□ 0.38
SEC23B-205ENST00000422877 EPHA10Q5JZY3 1008 aa17.42■□□□□ 0.38
SEC23B-205ENST00000422877 LMBR1LQ6UX01 489 aa17.42■□□□□ 0.38
SEC23B-205ENST00000422877 GPBP1L1Q9HC44 474 aaPredicted RBP17.42■□□□□ 0.38
SEC23B-205ENST00000422877 SCN9AQ15858 1988 aa17.42■□□□□ 0.38
SEC23B-205ENST00000422877 XDHP47989 1333 aa17.42■□□□□ 0.38
SEC23B-205ENST00000422877 GLTPD2A6NH11 291 aa17.41■□□□□ 0.38
SEC23B-205ENST00000422877 KIAA2012Q0VF49 1180 aa17.41■□□□□ 0.38
SEC23B-205ENST00000422877 CCDC57Q2TAC2 916 aa17.41■□□□□ 0.38
SEC23B-205ENST00000422877 DPY19L2Q6NUT2 758 aa17.41■□□□□ 0.38
SEC23B-205ENST00000422877 JDP2Q8WYK2 163 aa17.41■□□□□ 0.38
SEC23B-205ENST00000422877 NSFL1CQ9UNZ2 370 aaKnown RBP17.41■□□□□ 0.38
SEC23B-205ENST00000422877 ZNF646O15015 1829 aaPredicted RBP17.4■□□□□ 0.38
SEC23B-205ENST00000422877 FZD9O00144 591 aa17.4■□□□□ 0.38
SEC23B-205ENST00000422877 PPIP5K2O43314 1243 aa17.4■□□□□ 0.38
SEC23B-205ENST00000422877 UBTFL1P0CB47 393 aaPredicted RBP17.4■□□□□ 0.38
SEC23B-205ENST00000422877 GPSM2P81274 684 aa17.4■□□□□ 0.38
SEC23B-205ENST00000422877 LARGE2Q8N3Y3 721 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms