RNA–Protein interactions for RNA: ENST00000422863.1

HLA-DQA1-204, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

Gene HLA-DQA1, Length 520 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-204ENST00000422863 EPS15P42566 896 aa10.21□□□□□ -0.77
HLA-DQA1-204ENST00000422863 NBPF5PQ86XG9 351 aaPredicted RBP10.21□□□□□ -0.77
HLA-DQA1-204ENST00000422863 MRC1P22897 1456 aa10.21□□□□□ -0.78
HLA-DQA1-204ENST00000422863 COL4A5P29400 1685 aa10.21□□□□□ -0.78
HLA-DQA1-204ENST00000422863 IL6STP40189 918 aaPredicted RBP10.2□□□□□ -0.78
HLA-DQA1-204ENST00000422863 NPM2Q86SE8 214 aaKnown RBP10.2□□□□□ -0.78
HLA-DQA1-204ENST00000422863 DZIP3Q86Y13 1208 aaKnown RBP10.2□□□□□ -0.78
HLA-DQA1-204ENST00000422863 GPC2Q8N158 579 aa10.2□□□□□ -0.78
HLA-DQA1-204ENST00000422863 NUP98P52948 1817 aa10.19□□□□□ -0.78
HLA-DQA1-204ENST00000422863 HEG1Q9ULI3 1381 aa10.19□□□□□ -0.78
HLA-DQA1-204ENST00000422863 TCERG1O14776 1098 aaKnown RBP10.19□□□□□ -0.78
HLA-DQA1-204ENST00000422863 KCNQ3O43525 872 aa10.19□□□□□ -0.78
HLA-DQA1-204ENST00000422863 LMOD1P29536 600 aaPredicted RBP10.19□□□□□ -0.78
HLA-DQA1-204ENST00000422863 EIF6P56537 245 aaKnown RBP10.19□□□□□ -0.78
HLA-DQA1-204ENST00000422863 SOX10P56693 466 aa10.19□□□□□ -0.78
HLA-DQA1-204ENST00000422863 SLC51AQ86UW1 340 aa10.19□□□□□ -0.78
HLA-DQA1-204ENST00000422863 JDP2Q8WYK2 163 aa10.19□□□□□ -0.78
HLA-DQA1-204ENST00000422863 ZIC5Q96T25 663 aa10.19□□□□□ -0.78
HLA-DQA1-204ENST00000422863 TLL2Q9Y6L7 1015 aa10.19□□□□□ -0.78
HLA-DQA1-204ENST00000422863 MAP2K2P36507 400 aa10.18□□□□□ -0.78
HLA-DQA1-204ENST00000422863 CIAPIN1Q6FI81 312 aa10.18□□□□□ -0.78
HLA-DQA1-204ENST00000422863 ZNF790Q6PG37 636 aa10.18□□□□□ -0.78
HLA-DQA1-204ENST00000422863 MICALL2Q8IY33 904 aa10.18□□□□□ -0.78
HLA-DQA1-204ENST00000422863 RTKN2Q8IZC4 609 aa10.18□□□□□ -0.78
HLA-DQA1-204ENST00000422863 USP16Q9Y5T5 823 aa10.18□□□□□ -0.78
HLA-DQA1-204ENST00000422863 PRAMEF22A3QJZ6 481 aa10.17□□□□□ -0.78
HLA-DQA1-204ENST00000422863 CELF2O95319 508 aaKnown RBP10.17□□□□□ -0.78
HLA-DQA1-204ENST00000422863 SCNN1DP51172 638 aa10.17□□□□□ -0.78
HLA-DQA1-204ENST00000422863 TEFQ10587 303 aa10.17□□□□□ -0.78
HLA-DQA1-204ENST00000422863 IL17REQ8NFR9 667 aa10.17□□□□□ -0.78
HLA-DQA1-204ENST00000422863 TEX13AQ9BXU3 409 aaPredicted RBP10.17□□□□□ -0.78
HLA-DQA1-204ENST00000422863 GLIS2Q9BZE0 524 aaPredicted RBP10.17□□□□□ -0.78
HLA-DQA1-204ENST00000422863 ZNF408Q9H9D4 720 aa10.17□□□□□ -0.78
HLA-DQA1-204ENST00000422863 NIP7Q9Y221 180 aaKnown RBP eCLIP10.17□□□□□ -0.78
HLA-DQA1-204ENST00000422863 ALDH1B1P30837 517 aa10.16□□□□□ -0.78
HLA-DQA1-204ENST00000422863 PBX2P40425 430 aa10.16□□□□□ -0.78
HLA-DQA1-204ENST00000422863 SAPCD2Q86UD0 394 aa10.16□□□□□ -0.78
HLA-DQA1-204ENST00000422863 LARGE2Q8N3Y3 721 aa10.16□□□□□ -0.78
HLA-DQA1-204ENST00000422863 FMNL2Q96PY5 1086 aa10.16□□□□□ -0.78
HLA-DQA1-204ENST00000422863 TAF1P21675 1872 aa10.16□□□□□ -0.78
HLA-DQA1-204ENST00000422863 KLRG2A4D1S0 409 aaPredicted RBP10.15□□□□□ -0.78
HLA-DQA1-204ENST00000422863 GTF2E1P29083 439 aaPredicted RBP10.15□□□□□ -0.78
HLA-DQA1-204ENST00000422863 DLK2Q6UY11 383 aa10.15□□□□□ -0.78
HLA-DQA1-204ENST00000422863 TPTE2Q6XPS3 522 aa10.15□□□□□ -0.78
HLA-DQA1-204ENST00000422863 USP50Q70EL3 339 aaPredicted RBP10.15□□□□□ -0.78
HLA-DQA1-204ENST00000422863 KHSRPQ92945 711 aaKnown RBP eCLIP10.15□□□□□ -0.78
HLA-DQA1-204ENST00000422863 HLFQ16534 295 aa10.14□□□□□ -0.79
HLA-DQA1-204ENST00000422863 NUTM1Q86Y26 1132 aa10.14□□□□□ -0.79
HLA-DQA1-204ENST00000422863 BTBD11A6QL63 1104 aa10.13□□□□□ -0.79
HLA-DQA1-204ENST00000422863 CA12O43570 354 aa10.13□□□□□ -0.79
HLA-DQA1-204ENST00000422863 BRPF1P55201 1214 aaPredicted RBP10.13□□□□□ -0.79
HLA-DQA1-204ENST00000422863 CNGB1Q14028 1251 aaPredicted RBP10.13□□□□□ -0.79
HLA-DQA1-204ENST00000422863 POTEEQ6S8J3 1075 aa10.13□□□□□ -0.79
HLA-DQA1-204ENST00000422863 CLEC4GQ6UXB4 293 aa10.13□□□□□ -0.79
HLA-DQA1-204ENST00000422863 PSMD1Q99460 953 aa10.13□□□□□ -0.79
HLA-DQA1-204ENST00000422863 GNAT3A8MTJ3 354 aa10.12□□□□□ -0.79
HLA-DQA1-204ENST00000422863 NGEFQ8N5V2 710 aa10.12□□□□□ -0.79
HLA-DQA1-204ENST00000422863 ADARB2Q9NS39 739 aaKnown RBP10.12□□□□□ -0.79
HLA-DQA1-204ENST00000422863 ZNF652Q9Y2D9 606 aa10.12□□□□□ -0.79
HLA-DQA1-204ENST00000422863 KNSTRNQ9Y448 316 aa10.12□□□□□ -0.79
HLA-DQA1-204ENST00000422863 SNED1Q8TER0 1413 aa10.12□□□□□ -0.79
HLA-DQA1-204ENST00000422863 SHTN1A0MZ66 631 aa10.11□□□□□ -0.79
HLA-DQA1-204ENST00000422863 NBPF26B4DH59 902 aa10.11□□□□□ -0.79
HLA-DQA1-204ENST00000422863 U2SURPO15042 1029 aaKnown RBP10.11□□□□□ -0.79
HLA-DQA1-204ENST00000422863 DIAPH1O60610 1272 aaKnown RBP10.11□□□□□ -0.79
HLA-DQA1-204ENST00000422863 HIRAP54198 1017 aaPredicted RBP10.11□□□□□ -0.79
HLA-DQA1-204ENST00000422863 AOC3Q16853 763 aa10.11□□□□□ -0.79
HLA-DQA1-204ENST00000422863 NBPF10Q6P3W6 841 aaKnown RBP10.11□□□□□ -0.79
HLA-DQA1-204ENST00000422863 NIM1KQ8IY84 436 aa10.11□□□□□ -0.79
HLA-DQA1-204ENST00000422863 NBPF15Q8N660 670 aa10.11□□□□□ -0.79
HLA-DQA1-204ENST00000422863 GPRC5DQ9NZD1 345 aa10.11□□□□□ -0.79
HLA-DQA1-204ENST00000422863 PPIP5K2O43314 1243 aa10.1□□□□□ -0.79
HLA-DQA1-204ENST00000422863 TRPA1O75762 1119 aa10.1□□□□□ -0.79
HLA-DQA1-204ENST00000422863 GMPSP49915 693 aaPredicted RBP10.1□□□□□ -0.79
HLA-DQA1-204ENST00000422863 HUNKP57058 714 aa10.1□□□□□ -0.79
HLA-DQA1-204ENST00000422863 CXCL9Q07325 125 aa10.1□□□□□ -0.79
HLA-DQA1-204ENST00000422863 PRPF38BQ5VTL8 546 aaKnown RBP10.1□□□□□ -0.79
HLA-DQA1-204ENST00000422863 USP48Q86UV5 1035 aa10.1□□□□□ -0.79
HLA-DQA1-204ENST00000422863 EFCAB3Q8N7B9 438 aa10.1□□□□□ -0.79
HLA-DQA1-204ENST00000422863 RPGRQ92834 1020 aaKnown RBP10.1□□□□□ -0.79
HLA-DQA1-204ENST00000422863 LAMB2P55268 1798 aa10.1□□□□□ -0.79
HLA-DQA1-204ENST00000422863 ABCC12Q96J65 1359 aa10.1□□□□□ -0.79
HLA-DQA1-204ENST00000422863 RAD17O75943 681 aa10.09□□□□□ -0.79
HLA-DQA1-204ENST00000422863 HSPA5P11021 654 aaKnown RBP10.09□□□□□ -0.79
HLA-DQA1-204ENST00000422863 GPTP24298 496 aa10.09□□□□□ -0.79
HLA-DQA1-204ENST00000422863 KIF23Q02241 960 aaPredicted RBP10.09□□□□□ -0.79
HLA-DQA1-204ENST00000422863 TRPM4Q8TD43 1214 aa10.09□□□□□ -0.79
HLA-DQA1-204ENST00000422863 BCL2L13Q9BXK5 485 aa10.09□□□□□ -0.79
HLA-DQA1-204ENST00000422863 PPEF1O14829 653 aaPredicted RBP10.08□□□□□ -0.8
HLA-DQA1-204ENST00000422863 SNRPA1P09661 255 aaKnown RBP10.08□□□□□ -0.8
HLA-DQA1-204ENST00000422863 NOGQ13253 232 aa10.08□□□□□ -0.8
HLA-DQA1-204ENST00000422863 CC2D1BQ5T0F9 858 aaKnown RBP10.08□□□□□ -0.8
HLA-DQA1-204ENST00000422863 CC2D2BQ6DHV5 1058 aa10.08□□□□□ -0.8
HLA-DQA1-204ENST00000422863 RBM17Q96I25 401 aaKnown RBP10.08□□□□□ -0.8
HLA-DQA1-204ENST00000422863 HHIPL1Q96JK4 782 aa10.08□□□□□ -0.8
HLA-DQA1-204ENST00000422863 PHACTR3Q96KR7 559 aa10.08□□□□□ -0.8
HLA-DQA1-204ENST00000422863 RNF186Q9NXI6 227 aa10.08□□□□□ -0.8
HLA-DQA1-204ENST00000422863 NPC1L1Q9UHC9 1359 aa10.08□□□□□ -0.8
HLA-DQA1-204ENST00000422863 DLG5Q8TDM6 1919 aa10.07□□□□□ -0.8
HLA-DQA1-204ENST00000422863 RGS20O76081 388 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms