RNA–Protein interactions for RNA: ENST00000422785.7

CDCA3-202, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 2,760 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-202ENST00000422785 CPA1P15085 419 aa16.55■□□□□ 0.24
CDCA3-202ENST00000422785 RNF20Q5VTR2 975 aa16.55■□□□□ 0.24
CDCA3-202ENST00000422785 ARXQ96QS3 562 aa16.55■□□□□ 0.24
CDCA3-202ENST00000422785 PRPF40AO75400 957 aaKnown RBP16.54■□□□□ 0.24
CDCA3-202ENST00000422785 PSMA5P28066 241 aa16.54■□□□□ 0.24
CDCA3-202ENST00000422785 ZNF589Q86UQ0 364 aaPredicted RBP16.54■□□□□ 0.24
CDCA3-202ENST00000422785 ZSCAN31Q96LW9 406 aaPredicted RBP16.54■□□□□ 0.24
CDCA3-202ENST00000422785 GRPEL1Q9HAV7 217 aa16.54■□□□□ 0.24
CDCA3-202ENST00000422785 ZNF330Q9Y3S2 320 aaPredicted RBP16.54■□□□□ 0.24
CDCA3-202ENST00000422785 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.54■□□□□ 0.24
CDCA3-202ENST00000422785 RPAP1Q9BWH6 1393 aaPredicted RBP16.54■□□□□ 0.24
CDCA3-202ENST00000422785 EXOC5O00471 708 aa16.54■□□□□ 0.24
CDCA3-202ENST00000422785 DNAJC2Q99543 621 aaKnown RBP16.54■□□□□ 0.24
CDCA3-202ENST00000422785 WDR33Q9C0J8 1336 aaKnown RBP16.54■□□□□ 0.24
CDCA3-202ENST00000422785 TAF5LO75529 589 aa16.53■□□□□ 0.24
CDCA3-202ENST00000422785 PCCAP05165 728 aaPredicted RBP16.53■□□□□ 0.24
CDCA3-202ENST00000422785 FOXD4L5Q5VV16 416 aaPredicted RBP16.53■□□□□ 0.24
CDCA3-202ENST00000422785 TICAM2Q86XR7 235 aa16.53■□□□□ 0.24
CDCA3-202ENST00000422785 FOXD4L4Q8WXT5 416 aaPredicted RBP16.53■□□□□ 0.24
CDCA3-202ENST00000422785 PLA2G12BQ9BX93 195 aa16.53■□□□□ 0.24
CDCA3-202ENST00000422785 LRRC24Q50LG9 513 aa16.53■□□□□ 0.24
CDCA3-202ENST00000422785 ZNF594Q96JF6 807 aaPredicted RBP16.53■□□□□ 0.24
CDCA3-202ENST00000422785 NEUROD6Q96NK8 337 aa16.53■□□□□ 0.24
CDCA3-202ENST00000422785 SH2B1Q9NRF2 756 aaPredicted RBP16.53■□□□□ 0.24
CDCA3-202ENST00000422785 HMG20BQ9P0W2 317 aa16.53■□□□□ 0.24
CDCA3-202ENST00000422785 MAP3K15Q6ZN16 1313 aa16.53■□□□□ 0.24
CDCA3-202ENST00000422785 TSGA10IPQ3SY00 556 aa16.52■□□□□ 0.24
CDCA3-202ENST00000422785 USPL1Q5W0Q7 1092 aa16.52■□□□□ 0.24
CDCA3-202ENST00000422785 GAS2L3Q86XJ1 694 aa16.52■□□□□ 0.24
CDCA3-202ENST00000422785 FBXO3Q9UK99 471 aa16.52■□□□□ 0.24
CDCA3-202ENST00000422785 ZNF609O15014 1411 aa16.52■□□□□ 0.23
CDCA3-202ENST00000422785 GIGYF2Q6Y7W6 1299 aaKnown RBP16.52■□□□□ 0.23
CDCA3-202ENST00000422785 KBTBD3Q8NAB2 608 aa16.52■□□□□ 0.23
CDCA3-202ENST00000422785 NDUFB9Q9Y6M9 179 aa16.52■□□□□ 0.23
CDCA3-202ENST00000422785 CYP19A1P11511 503 aaPredicted RBP16.51■□□□□ 0.23
CDCA3-202ENST00000422785 TIMM10P62072 90 aa16.51■□□□□ 0.23
CDCA3-202ENST00000422785 CCDC57Q2TAC2 916 aa16.51■□□□□ 0.23
CDCA3-202ENST00000422785 ZBTB38Q8NAP3 1195 aaPredicted RBP16.51■□□□□ 0.23
CDCA3-202ENST00000422785 LARP6Q9BRS8 491 aaKnown RBP16.51■□□□□ 0.23
CDCA3-202ENST00000422785 WNK3Q9BYP7 1800 aa16.51■□□□□ 0.23
CDCA3-202ENST00000422785 SLC4A9Q96Q91 983 aa16.51■□□□□ 0.23
CDCA3-202ENST00000422785 PALLDQ8WX93 1383 aa16.51■□□□□ 0.23
CDCA3-202ENST00000422785 DDX46Q7L014 1031 aaKnown RBP16.5■□□□□ 0.23
CDCA3-202ENST00000422785 CHAMP1Q96JM3 812 aa16.5■□□□□ 0.23
CDCA3-202ENST00000422785 ALDH8A1Q9H2A2 487 aaPredicted RBP16.5■□□□□ 0.23
CDCA3-202ENST00000422785 LARGE1O95461 756 aa16.5■□□□□ 0.23
CDCA3-202ENST00000422785 CSF1RP07333 972 aa16.5■□□□□ 0.23
CDCA3-202ENST00000422785 NCLP19338 710 aaKnown RBP16.5■□□□□ 0.23
CDCA3-202ENST00000422785 MCMDC2Q4G0Z9 681 aa16.5■□□□□ 0.23
CDCA3-202ENST00000422785 GPT2Q8TD30 523 aa16.5■□□□□ 0.23
CDCA3-202ENST00000422785 PAG1Q9NWQ8 432 aa16.5■□□□□ 0.23
CDCA3-202ENST00000422785 SMC3Q9UQE7 1217 aa16.5■□□□□ 0.23
CDCA3-202ENST00000422785 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.5■□□□□ 0.23
CDCA3-202ENST00000422785 HSP90AB3PQ58FF7 597 aa16.49■□□□□ 0.23
CDCA3-202ENST00000422785 FAM89AQ96GI7 184 aa16.49■□□□□ 0.23
CDCA3-202ENST00000422785 PANK2Q9BZ23 570 aa16.49■□□□□ 0.23
CDCA3-202ENST00000422785 PUS3Q9BZE2 481 aaKnown RBP16.49■□□□□ 0.23
CDCA3-202ENST00000422785 CEP126Q9P2H0 1117 aa16.49■□□□□ 0.23
CDCA3-202ENST00000422785 SH3TC1Q8TE82 1336 aa16.49■□□□□ 0.23
CDCA3-202ENST00000422785 CDHR2Q9BYE9 1310 aa16.49■□□□□ 0.23
CDCA3-202ENST00000422785 A0A1B0GUL7 405 aa16.49■□□□□ 0.23
CDCA3-202ENST00000422785 CAVIN1Q6NZI2 390 aaKnown RBP16.49■□□□□ 0.23
CDCA3-202ENST00000422785 BLOC1S2Q6QNY1 142 aa16.49■□□□□ 0.23
CDCA3-202ENST00000422785 CDCA7Q9BWT1 371 aaPredicted RBP16.49■□□□□ 0.23
CDCA3-202ENST00000422785 ZNF445P59923 1031 aa16.49■□□□□ 0.23
CDCA3-202ENST00000422785 ANKRD1Q15327 319 aa16.49■□□□□ 0.23
CDCA3-202ENST00000422785 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.49■□□□□ 0.23
CDCA3-202ENST00000422785 KRT32Q14532 448 aa16.48■□□□□ 0.23
CDCA3-202ENST00000422785 HLFQ16534 295 aa16.48■□□□□ 0.23
CDCA3-202ENST00000422785 CCDC9Q9Y3X0 531 aaKnown RBP16.48■□□□□ 0.23
CDCA3-202ENST00000422785 U3KPZ7 1027 aaPredicted RBP16.48■□□□□ 0.23
CDCA3-202ENST00000422785 GOLIM4O00461 696 aa16.48■□□□□ 0.23
CDCA3-202ENST00000422785 MBD3O95983 291 aa16.48■□□□□ 0.23
CDCA3-202ENST00000422785 RPS6KB1P23443 525 aa16.48■□□□□ 0.23
CDCA3-202ENST00000422785 NLRP10Q86W26 655 aa16.48■□□□□ 0.23
CDCA3-202ENST00000422785 CCDC83Q8IWF9 413 aa16.48■□□□□ 0.23
CDCA3-202ENST00000422785 SYTL4Q96C24 671 aaPredicted RBP16.48■□□□□ 0.23
CDCA3-202ENST00000422785 STX6O43752 255 aa16.47■□□□□ 0.23
CDCA3-202ENST00000422785 ZSCAN22P10073 491 aaPredicted RBP16.47■□□□□ 0.23
CDCA3-202ENST00000422785 SYT1P21579 422 aa16.47■□□□□ 0.23
CDCA3-202ENST00000422785 ME3Q16798 604 aa16.47■□□□□ 0.23
CDCA3-202ENST00000422785 ZSCAN23Q3MJ62 389 aa16.47■□□□□ 0.23
CDCA3-202ENST00000422785 HELLSQ9NRZ9 838 aa16.47■□□□□ 0.23
CDCA3-202ENST00000422785 AKAP2Q9Y2D5 859 aa16.47■□□□□ 0.23
CDCA3-202ENST00000422785 TAF6LQ9Y6J9 622 aa16.47■□□□□ 0.23
CDCA3-202ENST00000422785 SPEF2Q9C093 1822 aa16.47■□□□□ 0.23
CDCA3-202ENST00000422785 CHGBP05060 677 aa16.47■□□□□ 0.23
CDCA3-202ENST00000422785 IFIT1P09914 478 aaKnown RBP16.47■□□□□ 0.23
CDCA3-202ENST00000422785 PRIM1P49642 420 aaKnown RBP16.47■□□□□ 0.23
CDCA3-202ENST00000422785 IFIT5Q13325 482 aaKnown RBP16.47■□□□□ 0.23
CDCA3-202ENST00000422785 SEC62Q99442 399 aaKnown RBP16.47■□□□□ 0.23
CDCA3-202ENST00000422785 TPCN1Q9ULQ1 816 aa16.47■□□□□ 0.23
CDCA3-202ENST00000422785 ZBTB1Q9Y2K1 713 aa16.47■□□□□ 0.23
CDCA3-202ENST00000422785 CCDC129Q6ZRS4 1044 aa16.46■□□□□ 0.23
CDCA3-202ENST00000422785 THRAP3Q9Y2W1 955 aaKnown RBP16.46■□□□□ 0.23
CDCA3-202ENST00000422785 KAT6BQ8WYB5 2073 aa16.46■□□□□ 0.23
CDCA3-202ENST00000422785 ANKRD36CQ5JPF3 1778 aa16.46■□□□□ 0.23
CDCA3-202ENST00000422785 ERVV-1B6SEH8 477 aa16.45■□□□□ 0.22
CDCA3-202ENST00000422785 GJB2P29033 226 aa16.45■□□□□ 0.22
CDCA3-202ENST00000422785 IL6STP40189 918 aaPredicted RBP16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms