RNA–Protein interactions for RNA: ENST00000422770.5

HERC3-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 4

Gene HERC3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-204ENST00000422770 CCDC152Q4G0S7 254 aa12.26□□□□□ -0.45
HERC3-204ENST00000422770 SLC51AQ86UW1 340 aa12.26□□□□□ -0.45
HERC3-204ENST00000422770 LINS1Q8NG48 757 aa12.26□□□□□ -0.45
HERC3-204ENST00000422770 GRAPLQ8TC17 118 aaPredicted RBP12.26□□□□□ -0.45
HERC3-204ENST00000422770 ZNF277Q9NRM2 450 aaPredicted RBP12.26□□□□□ -0.45
HERC3-204ENST00000422770 LRRC37AA6NMS7 1700 aa12.25□□□□□ -0.45
HERC3-204ENST00000422770 FKBP4Q02790 459 aaKnown RBP eCLIP12.25□□□□□ -0.45
HERC3-204ENST00000422770 ALDH1L2Q3SY69 923 aa12.25□□□□□ -0.45
HERC3-204ENST00000422770 TRMT2AQ8IZ69 625 aaKnown RBP12.25□□□□□ -0.45
HERC3-204ENST00000422770 SRCIN1Q9C0H9 1055 aa12.25□□□□□ -0.45
HERC3-204ENST00000422770 C9orf78Q9NZ63 289 aaPredicted RBP12.25□□□□□ -0.45
HERC3-204ENST00000422770 CHMP3Q9Y3E7 222 aa12.25□□□□□ -0.45
HERC3-204ENST00000422770 CDHR2Q9BYE9 1310 aa12.25□□□□□ -0.45
HERC3-204ENST00000422770 COL4A1P02462 1669 aa12.25□□□□□ -0.45
HERC3-204ENST00000422770 BBOX1O75936 387 aa12.24□□□□□ -0.45
HERC3-204ENST00000422770 PTPRCP08575 1304 aa12.24□□□□□ -0.45
HERC3-204ENST00000422770 CT47B1P0C2W7 299 aaPredicted RBP12.24□□□□□ -0.45
HERC3-204ENST00000422770 PRELPP51888 382 aa12.24□□□□□ -0.45
HERC3-204ENST00000422770 CTSWP56202 376 aa12.24□□□□□ -0.45
HERC3-204ENST00000422770 SF3B3Q15393 1217 aaKnown RBP12.24□□□□□ -0.45
HERC3-204ENST00000422770 CC2D2BQ6DHV5 1058 aa12.24□□□□□ -0.45
HERC3-204ENST00000422770 C7orf43Q8WVR3 580 aa12.24□□□□□ -0.45
HERC3-204ENST00000422770 CELF1Q92879 486 aaKnown RBP12.24□□□□□ -0.45
HERC3-204ENST00000422770 SEC31BQ9NQW1 1179 aa12.24□□□□□ -0.45
HERC3-204ENST00000422770 ATP6V0A2Q9Y487 856 aa12.24□□□□□ -0.45
HERC3-204ENST00000422770 KDM2BQ8NHM5 1336 aa12.23□□□□□ -0.45
HERC3-204ENST00000422770 LTBP3Q9NS15 1303 aa12.23□□□□□ -0.45
HERC3-204ENST00000422770 BEND3Q5T5X7 828 aa12.23□□□□□ -0.45
HERC3-204ENST00000422770 DPP8Q6V1X1 898 aaPredicted RBP12.23□□□□□ -0.45
HERC3-204ENST00000422770 H7C1W4 665 aa12.22□□□□□ -0.45
HERC3-204ENST00000422770 IARSP41252 1262 aaKnown RBP12.22□□□□□ -0.45
HERC3-204ENST00000422770 ANKRD18AQ8IVF6 992 aa12.22□□□□□ -0.45
HERC3-204ENST00000422770 MPNDQ8N594 471 aa12.22□□□□□ -0.45
HERC3-204ENST00000422770 JDP2Q8WYK2 163 aa12.22□□□□□ -0.45
HERC3-204ENST00000422770 FRAT1Q92837 279 aaPredicted RBP12.22□□□□□ -0.45
HERC3-204ENST00000422770 NOB1Q9ULX3 412 aaKnown RBP12.22□□□□□ -0.45
HERC3-204ENST00000422770 KIF16BQ96L93 1317 aa12.21□□□□□ -0.45
HERC3-204ENST00000422770 GRM8O00222 908 aa12.21□□□□□ -0.45
HERC3-204ENST00000422770 PPIP5K2O43314 1243 aa12.21□□□□□ -0.45
HERC3-204ENST00000422770 ALDH1L1O75891 902 aa12.21□□□□□ -0.45
HERC3-204ENST00000422770 RARSP54136 660 aaKnown RBP12.21□□□□□ -0.45
HERC3-204ENST00000422770 RPS8P62241 208 aaKnown RBP12.21□□□□□ -0.45
HERC3-204ENST00000422770 GRIPAP1Q4V328 841 aa12.21□□□□□ -0.45
HERC3-204ENST00000422770 DPY19L2Q6NUT2 758 aa12.21□□□□□ -0.45
HERC3-204ENST00000422770 TMC4Q7Z404 712 aa12.21□□□□□ -0.45
HERC3-204ENST00000422770 SP8Q8IXZ3 490 aa12.21□□□□□ -0.45
HERC3-204ENST00000422770 C16orf71Q8IYS4 520 aaPredicted RBP12.21□□□□□ -0.45
HERC3-204ENST00000422770 LARGE2Q8N3Y3 721 aa12.21□□□□□ -0.45
HERC3-204ENST00000422770 SUPT20HQ8NEM7 779 aa12.21□□□□□ -0.45
HERC3-204ENST00000422770 CDC5LQ99459 802 aaKnown RBP12.21□□□□□ -0.45
HERC3-204ENST00000422770 GREM2Q9H772 168 aa12.21□□□□□ -0.45
HERC3-204ENST00000422770 NMRK2Q9NPI5 230 aa12.21□□□□□ -0.45
HERC3-204ENST00000422770 ANKIB1Q9P2G1 1089 aa12.21□□□□□ -0.45
HERC3-204ENST00000422770 NSFL1CQ9UNZ2 370 aaKnown RBP12.21□□□□□ -0.45
HERC3-204ENST00000422770 ZC3H4Q9UPT8 1303 aaKnown RBP12.2□□□□□ -0.46
HERC3-204ENST00000422770 C6orf229H3BNL8 230 aa12.2□□□□□ -0.46
HERC3-204ENST00000422770 AOC3Q16853 763 aa12.2□□□□□ -0.46
HERC3-204ENST00000422770 FAM161AQ3B820 660 aa12.2□□□□□ -0.46
HERC3-204ENST00000422770 NIM1KQ8IY84 436 aa12.2□□□□□ -0.46
HERC3-204ENST00000422770 TTLL11Q8NHH1 800 aa12.2□□□□□ -0.46
HERC3-204ENST00000422770 PSMD1Q99460 953 aa12.2□□□□□ -0.46
HERC3-204ENST00000422770 RIMBP2O15034 1052 aa12.19□□□□□ -0.46
HERC3-204ENST00000422770 BCAR3O75815 825 aa12.19□□□□□ -0.46
HERC3-204ENST00000422770 ITGA6P23229 1130 aa12.19□□□□□ -0.46
HERC3-204ENST00000422770 IGHMBP2P38935 993 aaKnown RBP12.19□□□□□ -0.46
HERC3-204ENST00000422770 TAF7LQ5H9L4 462 aa12.19□□□□□ -0.46
HERC3-204ENST00000422770 API5Q9BZZ5 524 aaKnown RBP12.19□□□□□ -0.46
HERC3-204ENST00000422770 RRAGCQ9HB90 399 aa12.19□□□□□ -0.46
HERC3-204ENST00000422770 DUOX1Q9NRD9 1551 aa12.18□□□□□ -0.46
HERC3-204ENST00000422770 A0A1B0GUL6 1792 aa12.18□□□□□ -0.46
HERC3-204ENST00000422770 ZNF541Q9H0D2 1346 aa12.18□□□□□ -0.46
HERC3-204ENST00000422770 ANKRD18BA2A2Z9 1011 aa12.18□□□□□ -0.46
HERC3-204ENST00000422770 GLTPD2A6NH11 291 aa12.18□□□□□ -0.46
HERC3-204ENST00000422770 G3V3G9 751 aa12.18□□□□□ -0.46
HERC3-204ENST00000422770 UFL1O94874 794 aa12.18□□□□□ -0.46
HERC3-204ENST00000422770 CASP7P55210 303 aa12.18□□□□□ -0.46
HERC3-204ENST00000422770 EIF6P56537 245 aaKnown RBP12.18□□□□□ -0.46
HERC3-204ENST00000422770 GPSM2P81274 684 aa12.18□□□□□ -0.46
HERC3-204ENST00000422770 DCAF8Q5TAQ9 597 aa12.18□□□□□ -0.46
HERC3-204ENST00000422770 MPHOSPH8Q99549 860 aa12.18□□□□□ -0.46
HERC3-204ENST00000422770 GJA3Q9Y6H8 435 aa12.18□□□□□ -0.46
HERC3-204ENST00000422770 SNED1Q8TER0 1413 aa12.18□□□□□ -0.46
HERC3-204ENST00000422770 LTBP1Q14766 1721 aa12.17□□□□□ -0.46
HERC3-204ENST00000422770 WDR90Q96KV7 1748 aa12.17□□□□□ -0.46
HERC3-204ENST00000422770 COL4A5P29400 1685 aa12.17□□□□□ -0.46
HERC3-204ENST00000422770 IPO8O15397 1037 aaKnown RBP12.17□□□□□ -0.46
HERC3-204ENST00000422770 DDNO94850 711 aaPredicted RBP12.17□□□□□ -0.46
HERC3-204ENST00000422770 NBPF7P0C2Y1 421 aaPredicted RBP12.17□□□□□ -0.46
HERC3-204ENST00000422770 CCT4P50991 539 aaKnown RBP12.17□□□□□ -0.46
HERC3-204ENST00000422770 IFIT5Q13325 482 aaKnown RBP12.17□□□□□ -0.46
HERC3-204ENST00000422770 LMBR1LQ6UX01 489 aa12.17□□□□□ -0.46
HERC3-204ENST00000422770 CLUAP1Q96AJ1 413 aa12.17□□□□□ -0.46
HERC3-204ENST00000422770 GPR101Q96P66 508 aaPredicted RBP12.17□□□□□ -0.46
HERC3-204ENST00000422770 PLA2G12BQ9BX93 195 aa12.17□□□□□ -0.46
HERC3-204ENST00000422770 FOXO4P98177 505 aa12.16□□□□□ -0.46
HERC3-204ENST00000422770 WASHC4Q2M389 1173 aa12.16□□□□□ -0.46
HERC3-204ENST00000422770 CCDC57Q2TAC2 916 aa12.16□□□□□ -0.46
HERC3-204ENST00000422770 SUCLG2Q96I99 432 aa12.16□□□□□ -0.46
HERC3-204ENST00000422770 EYA3Q99504 573 aa12.16□□□□□ -0.46
HERC3-204ENST00000422770 GGA1Q9UJY5 639 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms