RNA–Protein interactions for RNA: ENST00000422704.6

SEMA4D-208, Transcript of semaphorin 4D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEMA4D, Length 4,382 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-208ENST00000422704 DACT1Q9NYF0 836 aa12.34□□□□□ -0.43
SEMA4D-208ENST00000422704 EIF4A2Q14240 407 aaKnown RBP12.34□□□□□ -0.43
SEMA4D-208ENST00000422704 LEKR1Q6ZMV7 388 aa12.34□□□□□ -0.43
SEMA4D-208ENST00000422704 ANKRD44Q8N8A2 993 aa12.34□□□□□ -0.43
SEMA4D-208ENST00000422704 PHAXQ9H814 394 aaKnown RBP12.34□□□□□ -0.43
SEMA4D-208ENST00000422704 TOP1P11387 765 aaKnown RBP12.34□□□□□ -0.43
SEMA4D-208ENST00000422704 PRKCSHP14314 528 aaPredicted RBP12.34□□□□□ -0.43
SEMA4D-208ENST00000422704 MTHFSDQ2M296 383 aaKnown RBP12.34□□□□□ -0.43
SEMA4D-208ENST00000422704 ANKRD13DQ6ZTN6 518 aa12.34□□□□□ -0.43
SEMA4D-208ENST00000422704 ALKQ9UM73 1620 aa12.33□□□□□ -0.43
SEMA4D-208ENST00000422704 DLC1Q96QB1 1528 aa12.33□□□□□ -0.44
SEMA4D-208ENST00000422704 MARCKSP29966 332 aaPredicted RBP12.33□□□□□ -0.44
SEMA4D-208ENST00000422704 LMBR1LQ6UX01 489 aa12.33□□□□□ -0.44
SEMA4D-208ENST00000422704 CCDC186Q7Z3E2 898 aa12.33□□□□□ -0.44
SEMA4D-208ENST00000422704 MRPL50Q8N5N7 158 aaKnown RBP12.33□□□□□ -0.44
SEMA4D-208ENST00000422704 KIF18AQ8NI77 898 aa12.33□□□□□ -0.44
SEMA4D-208ENST00000422704 RBM8AQ9Y5S9 174 aaKnown RBP12.33□□□□□ -0.44
SEMA4D-208ENST00000422704 MPHOSPH10O00566 681 aaKnown RBP12.33□□□□□ -0.44
SEMA4D-208ENST00000422704 KIAA1328Q86T90 577 aa12.33□□□□□ -0.44
SEMA4D-208ENST00000422704 EVI5LQ96CN4 794 aa12.33□□□□□ -0.44
SEMA4D-208ENST00000422704 SLC12A7Q9Y666 1083 aa12.33□□□□□ -0.44
SEMA4D-208ENST00000422704 HELBQ8NG08 1087 aaPredicted RBP12.33□□□□□ -0.44
SEMA4D-208ENST00000422704 ESYT1Q9BSJ8 1104 aa12.33□□□□□ -0.44
SEMA4D-208ENST00000422704 ZBTB40Q9NUA8 1239 aa12.33□□□□□ -0.44
SEMA4D-208ENST00000422704 RIMS2Q9UQ26 1411 aa12.33□□□□□ -0.44
SEMA4D-208ENST00000422704 CCDC66A2RUB6 948 aa12.32□□□□□ -0.44
SEMA4D-208ENST00000422704 KLHDC4Q8TBB5 520 aa12.32□□□□□ -0.44
SEMA4D-208ENST00000422704 ZMYM3Q14202 1370 aa12.32□□□□□ -0.44
SEMA4D-208ENST00000422704 PTPRCP08575 1304 aa12.32□□□□□ -0.44
SEMA4D-208ENST00000422704 GOLGA8AA7E2F4 631 aa12.32□□□□□ -0.44
SEMA4D-208ENST00000422704 IDEP14735 1019 aa12.32□□□□□ -0.44
SEMA4D-208ENST00000422704 UBA5Q9GZZ9 404 aa12.32□□□□□ -0.44
SEMA4D-208ENST00000422704 NEFHP12036 1026 aa12.32□□□□□ -0.44
SEMA4D-208ENST00000422704 ERCC4Q92889 916 aaPredicted RBP12.32□□□□□ -0.44
SEMA4D-208ENST00000422704 YTHDC2Q9H6S0 1430 aaKnown RBP12.32□□□□□ -0.44
SEMA4D-208ENST00000422704 SMTNL1A8MU46 457 aa12.32□□□□□ -0.44
SEMA4D-208ENST00000422704 RXRAP19793 462 aa12.32□□□□□ -0.44
SEMA4D-208ENST00000422704 CNKSR2Q8WXI2 1034 aa12.32□□□□□ -0.44
SEMA4D-208ENST00000422704 CHAMP1Q96JM3 812 aa12.32□□□□□ -0.44
SEMA4D-208ENST00000422704 PLCD4Q9BRC7 762 aa12.32□□□□□ -0.44
SEMA4D-208ENST00000422704 DNAJC25Q9H1X3 360 aa12.32□□□□□ -0.44
SEMA4D-208ENST00000422704 WWC3Q9ULE0 1092 aa12.32□□□□□ -0.44
SEMA4D-208ENST00000422704 CBFA2T2O43439 604 aa12.31□□□□□ -0.44
SEMA4D-208ENST00000422704 SYCP1Q15431 976 aa12.31□□□□□ -0.44
SEMA4D-208ENST00000422704 HYPKQ9NX55 129 aa12.31□□□□□ -0.44
SEMA4D-208ENST00000422704 DACH1Q9UI36 760 aa12.31□□□□□ -0.44
SEMA4D-208ENST00000422704 NDUFB9Q9Y6M9 179 aa12.31□□□□□ -0.44
SEMA4D-208ENST00000422704 TULP4Q9NRJ4 1543 aa12.31□□□□□ -0.44
SEMA4D-208ENST00000422704 CCP110O43303 1012 aa12.31□□□□□ -0.44
SEMA4D-208ENST00000422704 ANKRD24Q8TF21 1146 aa12.31□□□□□ -0.44
SEMA4D-208ENST00000422704 ANKIB1Q9P2G1 1089 aa12.31□□□□□ -0.44
SEMA4D-208ENST00000422704 KLF18A0A0U1RQI7 1052 aa12.31□□□□□ -0.44
SEMA4D-208ENST00000422704 UBE2HP62256 183 aa12.31□□□□□ -0.44
SEMA4D-208ENST00000422704 AMOTQ4VCS5 1084 aa12.31□□□□□ -0.44
SEMA4D-208ENST00000422704 PPP4R3BQ5MIZ7 849 aa12.31□□□□□ -0.44
SEMA4D-208ENST00000422704 TMCO3Q6UWJ1 677 aa12.31□□□□□ -0.44
SEMA4D-208ENST00000422704 KRT28Q7Z3Y7 464 aa12.31□□□□□ -0.44
SEMA4D-208ENST00000422704 PLEKHM2Q8IWE5 1019 aa12.31□□□□□ -0.44
SEMA4D-208ENST00000422704 SLC26A6Q9BXS9 759 aa12.31□□□□□ -0.44
SEMA4D-208ENST00000422704 PTPRMP28827 1452 aa12.31□□□□□ -0.44
SEMA4D-208ENST00000422704 ZSCAN22P10073 491 aaPredicted RBP12.3□□□□□ -0.44
SEMA4D-208ENST00000422704 IARSP41252 1262 aaKnown RBP12.3□□□□□ -0.44
SEMA4D-208ENST00000422704 CDR1P51861 262 aa12.3□□□□□ -0.44
SEMA4D-208ENST00000422704 MAP3K12Q12852 859 aa12.3□□□□□ -0.44
SEMA4D-208ENST00000422704 AKAP2Q9Y2D5 859 aa12.3□□□□□ -0.44
SEMA4D-208ENST00000422704 NSD2O96028 1365 aa12.3□□□□□ -0.44
SEMA4D-208ENST00000422704 TNRQ92752 1358 aa12.3□□□□□ -0.44
SEMA4D-208ENST00000422704 ANO6Q4KMQ2 910 aa12.3□□□□□ -0.44
SEMA4D-208ENST00000422704 TMEM67Q5HYA8 995 aa12.3□□□□□ -0.44
SEMA4D-208ENST00000422704 CTCFLQ8NI51 663 aaPredicted RBP12.3□□□□□ -0.44
SEMA4D-208ENST00000422704 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.3□□□□□ -0.44
SEMA4D-208ENST00000422704 LMOD1P29536 600 aaPredicted RBP12.3□□□□□ -0.44
SEMA4D-208ENST00000422704 CEP85Q6P2H3 762 aa12.3□□□□□ -0.44
SEMA4D-208ENST00000422704 NFATC2IPQ8NCF5 419 aa12.3□□□□□ -0.44
SEMA4D-208ENST00000422704 BMP2KQ9NSY1 1161 aaPredicted RBP12.3□□□□□ -0.44
SEMA4D-208ENST00000422704 STX8Q9UNK0 236 aa12.3□□□□□ -0.44
SEMA4D-208ENST00000422704 ZNF76P36508 570 aa12.29□□□□□ -0.44
SEMA4D-208ENST00000422704 AFMP43652 599 aa12.29□□□□□ -0.44
SEMA4D-208ENST00000422704 TTC21BQ7Z4L5 1316 aa12.29□□□□□ -0.44
SEMA4D-208ENST00000422704 MATR3P43243 847 aaKnown RBP eCLIP12.29□□□□□ -0.44
SEMA4D-208ENST00000422704 LRSAM1Q6UWE0 723 aa12.29□□□□□ -0.44
SEMA4D-208ENST00000422704 SMC5Q8IY18 1101 aa12.29□□□□□ -0.44
SEMA4D-208ENST00000422704 AK2P54819 239 aa12.29□□□□□ -0.44
SEMA4D-208ENST00000422704 NLRP5P59047 1200 aa12.29□□□□□ -0.44
SEMA4D-208ENST00000422704 SPTY2D1Q68D10 685 aaPredicted RBP12.29□□□□□ -0.44
SEMA4D-208ENST00000422704 CGNQ9P2M7 1197 aaKnown RBP12.29□□□□□ -0.44
SEMA4D-208ENST00000422704 JAG2Q9Y219 1238 aa12.29□□□□□ -0.44
SEMA4D-208ENST00000422704 ANKRD36BQ8N2N9 1353 aa12.28□□□□□ -0.44
SEMA4D-208ENST00000422704 CHMP4BP1P59074 171 aa12.28□□□□□ -0.44
SEMA4D-208ENST00000422704 IQCA1Q86XH1 822 aa12.28□□□□□ -0.44
SEMA4D-208ENST00000422704 DZIP1Q86YF9 867 aaKnown RBP12.28□□□□□ -0.44
SEMA4D-208ENST00000422704 DCTPP1Q9H773 170 aa12.28□□□□□ -0.44
SEMA4D-208ENST00000422704 CWC15Q9P013 229 aaKnown RBP12.28□□□□□ -0.44
SEMA4D-208ENST00000422704 SSR1P43307 286 aaKnown RBP12.28□□□□□ -0.44
SEMA4D-208ENST00000422704 CAVIN4Q5BKX8 364 aa12.28□□□□□ -0.44
SEMA4D-208ENST00000422704 C17orf53Q8N3J3 647 aaPredicted RBP12.28□□□□□ -0.44
SEMA4D-208ENST00000422704 NLRP1Q9C000 1473 aa12.28□□□□□ -0.44
SEMA4D-208ENST00000422704 NUP88Q99567 741 aaPredicted RBP12.28□□□□□ -0.44
SEMA4D-208ENST00000422704 DDX19AQ9NUU7 478 aaKnown RBP12.28□□□□□ -0.44
SEMA4D-208ENST00000422704 Q6ZUG5 572 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms