RNA–Protein interactions for RNA: ENST00000422379.2

HPS4-204, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 1,942 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-204ENST00000422379 CARMIL3Q8ND23 1372 aa11.15□□□□□ -0.62
HPS4-204ENST00000422379 TTLL11Q8NHH1 800 aa11.15□□□□□ -0.62
HPS4-204ENST00000422379 SETDB2Q96T68 719 aa11.15□□□□□ -0.62
HPS4-204ENST00000422379 GREM2Q9H772 168 aa11.15□□□□□ -0.62
HPS4-204ENST00000422379 TNRC6CQ9HCJ0 1690 aaKnown RBP11.14□□□□□ -0.63
HPS4-204ENST00000422379 CTSWP56202 376 aa11.14□□□□□ -0.63
HPS4-204ENST00000422379 C16orf71Q8IYS4 520 aaPredicted RBP11.14□□□□□ -0.63
HPS4-204ENST00000422379 OTUD7AQ8TE49 926 aaPredicted RBP11.14□□□□□ -0.63
HPS4-204ENST00000422379 ZNF594Q96JF6 807 aaPredicted RBP11.14□□□□□ -0.63
HPS4-204ENST00000422379 BACH2Q9BYV9 841 aa11.14□□□□□ -0.63
HPS4-204ENST00000422379 LNPKQ9C0E8 428 aa11.14□□□□□ -0.63
HPS4-204ENST00000422379 UTRNP46939 3433 aa11.13□□□□□ -0.63
HPS4-204ENST00000422379 POLRMTO00411 1230 aaKnown RBP11.13□□□□□ -0.63
HPS4-204ENST00000422379 HMMRO75330 724 aa11.13□□□□□ -0.63
HPS4-204ENST00000422379 ANKRD45Q5TZF3 282 aa11.13□□□□□ -0.63
HPS4-204ENST00000422379 GCC1Q96CN9 775 aa11.13□□□□□ -0.63
HPS4-204ENST00000422379 SIL1Q9H173 461 aa11.13□□□□□ -0.63
HPS4-204ENST00000422379 STK32BQ9NY57 414 aa11.13□□□□□ -0.63
HPS4-204ENST00000422379 NOP58Q9Y2X3 529 aaKnown RBP11.13□□□□□ -0.63
HPS4-204ENST00000422379 LAMB2P55268 1798 aa11.13□□□□□ -0.63
HPS4-204ENST00000422379 SURF6O75683 361 aaKnown RBP11.13□□□□□ -0.63
HPS4-204ENST00000422379 SLC51AQ86UW1 340 aa11.13□□□□□ -0.63
HPS4-204ENST00000422379 CHD1LQ86WJ1 897 aa11.13□□□□□ -0.63
HPS4-204ENST00000422379 NBPF5PQ86XG9 351 aaPredicted RBP11.13□□□□□ -0.63
HPS4-204ENST00000422379 QSER1Q2KHR3 1735 aa11.12□□□□□ -0.63
HPS4-204ENST00000422379 PDE8AO60658 829 aa11.12□□□□□ -0.63
HPS4-204ENST00000422379 SASH1O94885 1247 aa11.12□□□□□ -0.63
HPS4-204ENST00000422379 RGS3P49796 1198 aa11.12□□□□□ -0.63
HPS4-204ENST00000422379 SLC10A5Q5PT55 438 aa11.12□□□□□ -0.63
HPS4-204ENST00000422379 PRR5LQ6MZQ0 368 aa11.12□□□□□ -0.63
HPS4-204ENST00000422379 PUS3Q9BZE2 481 aaKnown RBP11.12□□□□□ -0.63
HPS4-204ENST00000422379 COPRSQ9NQ92 184 aa11.12□□□□□ -0.63
HPS4-204ENST00000422379 SEC31BQ9NQW1 1179 aa11.12□□□□□ -0.63
HPS4-204ENST00000422379 CHMP3Q9Y3E7 222 aa11.12□□□□□ -0.63
HPS4-204ENST00000422379 ATXN8OSP0DMR3 200 aa11.11□□□□□ -0.63
HPS4-204ENST00000422379 LRRC24Q50LG9 513 aa11.11□□□□□ -0.63
HPS4-204ENST00000422379 ATG9AQ7Z3C6 839 aa11.11□□□□□ -0.63
HPS4-204ENST00000422379 BCL11AQ9H165 835 aa11.11□□□□□ -0.63
HPS4-204ENST00000422379 SERPINB2P05120 415 aa11.11□□□□□ -0.63
HPS4-204ENST00000422379 MMP10P09238 476 aa11.11□□□□□ -0.63
HPS4-204ENST00000422379 HMGB2P26583 209 aaKnown RBP11.11□□□□□ -0.63
HPS4-204ENST00000422379 FLAD1Q8NFF5 587 aa11.11□□□□□ -0.63
HPS4-204ENST00000422379 IL1RAPL2Q9NP60 686 aa11.11□□□□□ -0.63
HPS4-204ENST00000422379 HDAC5Q9UQL6 1122 aa11.11□□□□□ -0.63
HPS4-204ENST00000422379 CASZ1Q86V15 1759 aa11.1□□□□□ -0.63
HPS4-204ENST00000422379 ITGA6P23229 1130 aa11.1□□□□□ -0.63
HPS4-204ENST00000422379 RHPN1Q8TCX5 695 aa11.1□□□□□ -0.63
HPS4-204ENST00000422379 LRP5O75197 1615 aa11.1□□□□□ -0.63
HPS4-204ENST00000422379 MYH3P11055 1940 aa11.1□□□□□ -0.63
HPS4-204ENST00000422379 SALL3Q9BXA9 1300 aa11.1□□□□□ -0.63
HPS4-204ENST00000422379 HOXD11P31277 338 aaPredicted RBP11.09□□□□□ -0.63
HPS4-204ENST00000422379 TPTE2Q6XPS3 522 aa11.09□□□□□ -0.63
HPS4-204ENST00000422379 NLGN1Q8N2Q7 840 aa11.09□□□□□ -0.63
HPS4-204ENST00000422379 CNBD1Q8NA66 436 aa11.09□□□□□ -0.63
HPS4-204ENST00000422379 NYXQ9GZU5 481 aa11.09□□□□□ -0.63
HPS4-204ENST00000422379 NRXN2Q9P2S2 1712 aa11.09□□□□□ -0.63
HPS4-204ENST00000422379 TAF1P21675 1872 aa11.09□□□□□ -0.63
HPS4-204ENST00000422379 RIC1Q4ADV7 1423 aa11.09□□□□□ -0.63
HPS4-204ENST00000422379 SF3B3Q15393 1217 aaKnown RBP11.09□□□□□ -0.63
HPS4-204ENST00000422379 TSHZ3Q63HK5 1081 aa11.09□□□□□ -0.63
HPS4-204ENST00000422379 LRRCC1Q9C099 1032 aa11.09□□□□□ -0.63
HPS4-204ENST00000422379 IFIT5Q13325 482 aaKnown RBP11.08□□□□□ -0.64
HPS4-204ENST00000422379 RTL9Q8NET4 1388 aa11.08□□□□□ -0.64
HPS4-204ENST00000422379 ANKRD31Q8N7Z5 1873 aa11.08□□□□□ -0.64
HPS4-204ENST00000422379 GTF2E1P29083 439 aaPredicted RBP11.07□□□□□ -0.64
HPS4-204ENST00000422379 TFCP2Q12800 502 aa11.07□□□□□ -0.64
HPS4-204ENST00000422379 R3HDM1Q15032 1099 aaKnown RBP11.07□□□□□ -0.64
HPS4-204ENST00000422379 CCDC57Q2TAC2 916 aa11.07□□□□□ -0.64
HPS4-204ENST00000422379 C8orf34Q49A92 452 aa11.07□□□□□ -0.64
HPS4-204ENST00000422379 PLEKHM2Q8IWE5 1019 aa11.07□□□□□ -0.64
HPS4-204ENST00000422379 TLR7Q9NYK1 1049 aaKnown RBP11.07□□□□□ -0.64
HPS4-204ENST00000422379 RIPOR2Q9Y4F9 1068 aa11.07□□□□□ -0.64
HPS4-204ENST00000422379 WTIPA6NIX2 430 aaPredicted RBP11.07□□□□□ -0.64
HPS4-204ENST00000422379 EYA2O00167 538 aa11.07□□□□□ -0.64
HPS4-204ENST00000422379 RAB11FIP3O75154 756 aa11.07□□□□□ -0.64
HPS4-204ENST00000422379 ANP32AP39687 249 aaKnown RBP11.07□□□□□ -0.64
HPS4-204ENST00000422379 CELF1Q92879 486 aaKnown RBP11.07□□□□□ -0.64
HPS4-204ENST00000422379 EAF2Q96CJ1 260 aaPredicted RBP11.07□□□□□ -0.64
HPS4-204ENST00000422379 KIF1BPQ96EK5 621 aa11.07□□□□□ -0.64
HPS4-204ENST00000422379 ANKRD18BA2A2Z9 1011 aa11.06□□□□□ -0.64
HPS4-204ENST00000422379 MYCNP04198 464 aaPredicted RBP11.06□□□□□ -0.64
HPS4-204ENST00000422379 OS9Q13438 667 aaPredicted RBP11.06□□□□□ -0.64
HPS4-204ENST00000422379 CRY2Q49AN0 593 aa11.06□□□□□ -0.64
HPS4-204ENST00000422379 CCDC152Q4G0S7 254 aa11.06□□□□□ -0.64
HPS4-204ENST00000422379 PSDA5PKW4 1024 aaPredicted RBP11.05□□□□□ -0.64
HPS4-204ENST00000422379 SNAP23O00161 211 aa11.05□□□□□ -0.64
HPS4-204ENST00000422379 ZBTB7AO95365 584 aa11.05□□□□□ -0.64
HPS4-204ENST00000422379 G3BP1Q13283 466 aaKnown RBP eCLIP11.05□□□□□ -0.64
HPS4-204ENST00000422379 VGLL2Q8N8G2 317 aa11.05□□□□□ -0.64
HPS4-204ENST00000422379 NLRP3Q96P20 1036 aa11.05□□□□□ -0.64
HPS4-204ENST00000422379 KLRG2A4D1S0 409 aaPredicted RBP11.05□□□□□ -0.64
HPS4-204ENST00000422379 CIAO1O76071 339 aa11.05□□□□□ -0.64
HPS4-204ENST00000422379 GSPT1P15170 499 aaKnown RBP11.05□□□□□ -0.64
HPS4-204ENST00000422379 LDHAL6AQ6ZMR3 332 aa11.05□□□□□ -0.64
HPS4-204ENST00000422379 SPEF2Q9C093 1822 aa11.05□□□□□ -0.64
HPS4-204ENST00000422379 COL11A2P13942 1736 aaPredicted RBP11.04□□□□□ -0.64
HPS4-204ENST00000422379 IL15P40933 162 aaPredicted RBP11.04□□□□□ -0.64
HPS4-204ENST00000422379 HSP90AB4PQ58FF6 505 aa11.04□□□□□ -0.64
HPS4-204ENST00000422379 HELBQ8NG08 1087 aaPredicted RBP11.04□□□□□ -0.64
HPS4-204ENST00000422379 CCDC8Q9H0W5 538 aaPredicted RBP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms