RNA–Protein interactions for RNA: ENST00000421816.6

GCDH-202, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 2

Gene GCDH, Length 1,109 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-202ENST00000421816 ATF7IPQ6VMQ6 1270 aa24.46■■□□□ 1.51
GCDH-202ENST00000421816 FRAT1Q92837 279 aaPredicted RBP24.46■■□□□ 1.51
GCDH-202ENST00000421816 C9orf78Q9NZ63 289 aaPredicted RBP24.46■■□□□ 1.51
GCDH-202ENST00000421816 GRAPQ13588 217 aa24.45■■□□□ 1.5
GCDH-202ENST00000421816 SOGA3Q5TF21 947 aa24.45■■□□□ 1.5
GCDH-202ENST00000421816 GRAPLQ8TC17 118 aaPredicted RBP24.45■■□□□ 1.5
GCDH-202ENST00000421816 ZNF219Q9P2Y4 722 aaPredicted RBP24.45■■□□□ 1.5
GCDH-202ENST00000421816 COL4A1P02462 1669 aa24.45■■□□□ 1.5
GCDH-202ENST00000421816 CCDC152Q4G0S7 254 aa24.44■■□□□ 1.5
GCDH-202ENST00000421816 ZKSCAN2Q63HK3 967 aa24.44■■□□□ 1.5
GCDH-202ENST00000421816 TTLL11Q8NHH1 800 aa24.44■■□□□ 1.5
GCDH-202ENST00000421816 PPEF1O14829 653 aaPredicted RBP24.43■■□□□ 1.5
GCDH-202ENST00000421816 BBOX1O75936 387 aa24.43■■□□□ 1.5
GCDH-202ENST00000421816 INTS3Q68E01 1043 aaKnown RBP24.43■■□□□ 1.5
GCDH-202ENST00000421816 TNNQ9UQP3 1299 aa24.43■■□□□ 1.5
GCDH-202ENST00000421816 SNED1Q8TER0 1413 aa24.43■■□□□ 1.5
GCDH-202ENST00000421816 SBF1O95248 1867 aa24.43■■□□□ 1.5
GCDH-202ENST00000421816 RTL9Q8NET4 1388 aa24.42■■□□□ 1.5
GCDH-202ENST00000421816 CSF1RP07333 972 aa24.42■■□□□ 1.5
GCDH-202ENST00000421816 NBPF7P0C2Y1 421 aaPredicted RBP24.42■■□□□ 1.5
GCDH-202ENST00000421816 FOXO4P98177 505 aa24.42■■□□□ 1.5
GCDH-202ENST00000421816 USP44Q9H0E7 712 aa24.42■■□□□ 1.5
GCDH-202ENST00000421816 RCAN3Q9UKA8 241 aa24.42■■□□□ 1.5
GCDH-202ENST00000421816 LRRC37AA6NMS7 1700 aa24.41■■□□□ 1.5
GCDH-202ENST00000421816 UTRNP46939 3433 aa24.41■■□□□ 1.5
GCDH-202ENST00000421816 NFKBIEO00221 500 aa24.41■■□□□ 1.5
GCDH-202ENST00000421816 CCDC93Q567U6 631 aa24.41■■□□□ 1.5
GCDH-202ENST00000421816 CC2D2BQ6DHV5 1058 aa24.41■■□□□ 1.5
GCDH-202ENST00000421816 OLFM4Q6UX06 510 aa24.41■■□□□ 1.5
GCDH-202ENST00000421816 CELF1Q92879 486 aaKnown RBP24.41■■□□□ 1.5
GCDH-202ENST00000421816 SEC31BQ9NQW1 1179 aa24.41■■□□□ 1.5
GCDH-202ENST00000421816 CCDC85AQ96PX6 553 aaPredicted RBP24.4■■□□□ 1.5
GCDH-202ENST00000421816 ATP6V0A2Q9Y487 856 aa24.4■■□□□ 1.5
GCDH-202ENST00000421816 LTBP3Q9NS15 1303 aa24.39■■□□□ 1.5
GCDH-202ENST00000421816 EPHA10Q5JZY3 1008 aa24.39■■□□□ 1.49
GCDH-202ENST00000421816 TMC4Q7Z404 712 aa24.39■■□□□ 1.49
GCDH-202ENST00000421816 SP8Q8IXZ3 490 aa24.39■■□□□ 1.49
GCDH-202ENST00000421816 KAZALD1Q96I82 304 aa24.39■■□□□ 1.49
GCDH-202ENST00000421816 SUCLG2Q96I99 432 aa24.39■■□□□ 1.49
GCDH-202ENST00000421816 GREM2Q9H772 168 aa24.39■■□□□ 1.49
GCDH-202ENST00000421816 RPS8P62241 208 aaKnown RBP24.38■■□□□ 1.49
GCDH-202ENST00000421816 RASSF7Q02833 373 aa24.38■■□□□ 1.49
GCDH-202ENST00000421816 SLC51AQ86UW1 340 aa24.38■■□□□ 1.49
GCDH-202ENST00000421816 RTKN2Q8IZC4 609 aa24.38■■□□□ 1.49
GCDH-202ENST00000421816 CLUAP1Q96AJ1 413 aa24.38■■□□□ 1.49
GCDH-202ENST00000421816 CCDC88AQ3V6T2 1871 aa24.38■■□□□ 1.49
GCDH-202ENST00000421816 GRIPAP1Q4V328 841 aa24.37■■□□□ 1.49
GCDH-202ENST00000421816 PRELPP51888 382 aa24.36■■□□□ 1.49
GCDH-202ENST00000421816 SPEF2Q9C093 1822 aa24.35■■□□□ 1.49
GCDH-202ENST00000421816 FKBP4Q02790 459 aaKnown RBP eCLIP24.35■■□□□ 1.49
GCDH-202ENST00000421816 FAM161AQ3B820 660 aa24.35■■□□□ 1.49
GCDH-202ENST00000421816 LMBR1LQ6UX01 489 aa24.35■■□□□ 1.49
GCDH-202ENST00000421816 DZIP1LQ8IYY4 767 aaKnown RBP24.35■■□□□ 1.49
GCDH-202ENST00000421816 CDC5LQ99459 802 aaKnown RBP24.35■■□□□ 1.49
GCDH-202ENST00000421816 TAOK3Q9H2K8 898 aa24.35■■□□□ 1.49
GCDH-202ENST00000421816 DICER1Q9UPY3 1922 aaKnown RBP24.34■■□□□ 1.49
GCDH-202ENST00000421816 ITGA6P23229 1130 aa24.34■■□□□ 1.49
GCDH-202ENST00000421816 TMEM57Q8N5G2 664 aa24.34■■□□□ 1.49
GCDH-202ENST00000421816 PSMD1Q99460 953 aa24.34■■□□□ 1.49
GCDH-202ENST00000421816 LMNB1P20700 586 aa24.33■■□□□ 1.49
GCDH-202ENST00000421816 RABL6Q3YEC7 729 aaPredicted RBP24.33■■□□□ 1.49
GCDH-202ENST00000421816 ANKRD18AQ8IVF6 992 aa24.33■■□□□ 1.49
GCDH-202ENST00000421816 ANKRD44Q8N8A2 993 aa24.33■■□□□ 1.49
GCDH-202ENST00000421816 TMX4Q9H1E5 349 aaPredicted RBP24.33■■□□□ 1.49
GCDH-202ENST00000421816 LTBP1Q14766 1721 aa24.32■■□□□ 1.48
GCDH-202ENST00000421816 RLBP1P12271 317 aa24.32■■□□□ 1.48
GCDH-202ENST00000421816 C9orf131Q5VYM1 1079 aa24.32■■□□□ 1.48
GCDH-202ENST00000421816 MEIS3Q99687 375 aa24.32■■□□□ 1.48
GCDH-202ENST00000421816 BICC1Q9H694 974 aaKnown RBP24.32■■□□□ 1.48
GCDH-202ENST00000421816 UBTFL1P0CB47 393 aaPredicted RBP24.31■■□□□ 1.48
GCDH-202ENST00000421816 YY1P25490 414 aa24.31■■□□□ 1.48
GCDH-202ENST00000421816 FTSJ3Q8IY81 847 aaKnown RBP24.31■■□□□ 1.48
GCDH-202ENST00000421816 DUOX1Q9NRD9 1551 aa24.3■■□□□ 1.48
GCDH-202ENST00000421816 ANKRD18BA2A2Z9 1011 aa24.3■■□□□ 1.48
GCDH-202ENST00000421816 MPNDQ8N594 471 aa24.3■■□□□ 1.48
GCDH-202ENST00000421816 RTFDC1Q9BY42 306 aaPredicted RBP24.3■■□□□ 1.48
GCDH-202ENST00000421816 BSDC1Q9NW68 430 aaPredicted RBP24.3■■□□□ 1.48
GCDH-202ENST00000421816 RNF181Q9P0P0 153 aa24.3■■□□□ 1.48
GCDH-202ENST00000421816 TIAM2Q8IVF5 1701 aa24.3■■□□□ 1.48
GCDH-202ENST00000421816 GNAI3P08754 354 aa24.29■■□□□ 1.48
GCDH-202ENST00000421816 MS4A1P11836 297 aa24.29■■□□□ 1.48
GCDH-202ENST00000421816 IFIT5Q13325 482 aaKnown RBP24.29■■□□□ 1.48
GCDH-202ENST00000421816 HDAC5Q9UQL6 1122 aa24.29■■□□□ 1.48
GCDH-202ENST00000421816 CHMP3Q9Y3E7 222 aa24.29■■□□□ 1.48
GCDH-202ENST00000421816 IGHMBP2P38935 993 aaKnown RBP24.28■■□□□ 1.48
GCDH-202ENST00000421816 DPP8Q6V1X1 898 aaPredicted RBP24.28■■□□□ 1.48
GCDH-202ENST00000421816 PLIN1O60240 522 aa24.27■■□□□ 1.48
GCDH-202ENST00000421816 GPSM2P81274 684 aa24.27■■□□□ 1.48
GCDH-202ENST00000421816 CCDC57Q2TAC2 916 aa24.27■■□□□ 1.48
GCDH-202ENST00000421816 PANK1Q8TE04 598 aa24.27■■□□□ 1.48
GCDH-202ENST00000421816 ZNF277Q9NRM2 450 aaPredicted RBP24.27■■□□□ 1.48
GCDH-202ENST00000421816 PODXL2Q9NZ53 605 aa24.26■■□□□ 1.47
GCDH-202ENST00000421816 LRRFIP2Q9Y608 721 aaKnown RBP24.26■■□□□ 1.47
GCDH-202ENST00000421816 A0A1B0GUL6 1792 aa24.25■■□□□ 1.47
GCDH-202ENST00000421816 IARSP41252 1262 aaKnown RBP24.25■■□□□ 1.47
GCDH-202ENST00000421816 ITPRIPQ8IWB1 547 aa24.25■■□□□ 1.47
GCDH-202ENST00000421816 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.25■■□□□ 1.47
GCDH-202ENST00000421816 SUPT20HQ8NEM7 779 aa24.25■■□□□ 1.47
GCDH-202ENST00000421816 VPS33BQ9H267 617 aa24.25■■□□□ 1.47
GCDH-202ENST00000421816 MINPP1Q9UNW1 487 aa24.25■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms