RNA–Protein interactions for RNA: ENST00000421141.5

PTCH1-206, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,659 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-206ENST00000421141 PHAXQ9H814 394 aaKnown RBP12.54□□□□□ -0.4
PTCH1-206ENST00000421141 THRAP3Q9Y2W1 955 aaKnown RBP12.54□□□□□ -0.4
PTCH1-206ENST00000421141 K7ELQ4 463 aaPredicted RBP12.54□□□□□ -0.4
PTCH1-206ENST00000421141 C8orf58Q8NAV2 365 aa12.54□□□□□ -0.4
PTCH1-206ENST00000421141 ARHGEF40Q8TER5 1519 aa12.54□□□□□ -0.4
PTCH1-206ENST00000421141 PTPRTO14522 1441 aa12.54□□□□□ -0.4
PTCH1-206ENST00000421141 DESP17661 470 aa12.54□□□□□ -0.4
PTCH1-206ENST00000421141 KIDINS220Q9ULH0 1771 aa12.54□□□□□ -0.4
PTCH1-206ENST00000421141 MAGEB6P1A0A0J9YX57 407 aa12.53□□□□□ -0.4
PTCH1-206ENST00000421141 PRPF40BQ6NWY9 871 aaKnown RBP12.53□□□□□ -0.4
PTCH1-206ENST00000421141 DPP8Q6V1X1 898 aaPredicted RBP12.53□□□□□ -0.4
PTCH1-206ENST00000421141 STX8Q9UNK0 236 aa12.53□□□□□ -0.4
PTCH1-206ENST00000421141 BAG4O95429 457 aaKnown RBP12.53□□□□□ -0.4
PTCH1-206ENST00000421141 MBD3O95983 291 aa12.53□□□□□ -0.4
PTCH1-206ENST00000421141 IL13P35225 146 aa12.53□□□□□ -0.4
PTCH1-206ENST00000421141 HOXB7P09629 217 aa12.53□□□□□ -0.4
PTCH1-206ENST00000421141 SMARCE1Q969G3 411 aa12.53□□□□□ -0.4
PTCH1-206ENST00000421141 CNNM2Q9H8M5 875 aa12.53□□□□□ -0.4
PTCH1-206ENST00000421141 NPC1L1Q9UHC9 1359 aa12.53□□□□□ -0.4
PTCH1-206ENST00000421141 CCAR2Q8N163 923 aaKnown RBP12.53□□□□□ -0.4
PTCH1-206ENST00000421141 FIBPO43427 364 aa12.53□□□□□ -0.4
PTCH1-206ENST00000421141 UFL1O94874 794 aa12.53□□□□□ -0.4
PTCH1-206ENST00000421141 IBSPP21815 317 aaPredicted RBP12.53□□□□□ -0.4
PTCH1-206ENST00000421141 NIM1KQ8IY84 436 aa12.53□□□□□ -0.4
PTCH1-206ENST00000421141 PDE8AO60658 829 aa12.53□□□□□ -0.4
PTCH1-206ENST00000421141 TRIM37O94972 964 aa12.53□□□□□ -0.4
PTCH1-206ENST00000421141 LARGE2Q8N3Y3 721 aa12.53□□□□□ -0.4
PTCH1-206ENST00000421141 ABCA6Q8N139 1617 aa12.52□□□□□ -0.4
PTCH1-206ENST00000421141 GOLGA8BA8MQT2 603 aa12.52□□□□□ -0.4
PTCH1-206ENST00000421141 PICK1Q9NRD5 415 aa12.52□□□□□ -0.4
PTCH1-206ENST00000421141 HMG20BQ9P0W2 317 aa12.52□□□□□ -0.4
PTCH1-206ENST00000421141 MAST3O60307 1309 aa12.52□□□□□ -0.4
PTCH1-206ENST00000421141 PPP1R12BO60237 982 aaPredicted RBP12.52□□□□□ -0.4
PTCH1-206ENST00000421141 DPY19L2Q6NUT2 758 aa12.52□□□□□ -0.4
PTCH1-206ENST00000421141 UNC5CLQ8IV45 518 aa12.52□□□□□ -0.4
PTCH1-206ENST00000421141 IQSEC3Q9UPP2 1182 aaPredicted RBP12.52□□□□□ -0.4
PTCH1-206ENST00000421141 PLS1Q14651 629 aa12.52□□□□□ -0.41
PTCH1-206ENST00000421141 PHACTR3Q96KR7 559 aa12.52□□□□□ -0.41
PTCH1-206ENST00000421141 NCOA7Q8NI08 942 aa12.52□□□□□ -0.41
PTCH1-206ENST00000421141 SPDYE4A6NLX3 237 aa12.52□□□□□ -0.41
PTCH1-206ENST00000421141 CERS3Q8IU89 383 aa12.52□□□□□ -0.41
PTCH1-206ENST00000421141 DIP2CQ9Y2E4 1556 aa12.52□□□□□ -0.41
PTCH1-206ENST00000421141 METTL22Q9BUU2 404 aaPredicted RBP12.52□□□□□ -0.41
PTCH1-206ENST00000421141 SLC4A4Q9Y6R1 1079 aa12.52□□□□□ -0.41
PTCH1-206ENST00000421141 ALKQ9UM73 1620 aa12.52□□□□□ -0.41
PTCH1-206ENST00000421141 TRPM1Q7Z4N2 1603 aa12.51□□□□□ -0.41
PTCH1-206ENST00000421141 NLRP5P59047 1200 aa12.51□□□□□ -0.41
PTCH1-206ENST00000421141 IFIT1BQ5T764 474 aaKnown RBP12.51□□□□□ -0.41
PTCH1-206ENST00000421141 HOMER1Q86YM7 354 aa12.51□□□□□ -0.41
PTCH1-206ENST00000421141 PDCL3Q9H2J4 239 aa12.51□□□□□ -0.41
PTCH1-206ENST00000421141 ESR2Q92731 530 aa12.51□□□□□ -0.41
PTCH1-206ENST00000421141 DENND2AQ9ULE3 1009 aa12.51□□□□□ -0.41
PTCH1-206ENST00000421141 ARHGAP31Q2M1Z3 1444 aa12.51□□□□□ -0.41
PTCH1-206ENST00000421141 SH2B1Q9NRF2 756 aaPredicted RBP12.51□□□□□ -0.41
PTCH1-206ENST00000421141 MRPL50Q8N5N7 158 aaKnown RBP12.51□□□□□ -0.41
PTCH1-206ENST00000421141 PDILTQ8N807 584 aa12.51□□□□□ -0.41
PTCH1-206ENST00000421141 BICC1Q9H694 974 aaKnown RBP12.51□□□□□ -0.41
PTCH1-206ENST00000421141 RTL1A6NKG5 1358 aa12.51□□□□□ -0.41
PTCH1-206ENST00000421141 INSRP06213 1382 aa12.51□□□□□ -0.41
PTCH1-206ENST00000421141 PRDM15P57071 1507 aaPredicted RBP12.51□□□□□ -0.41
PTCH1-206ENST00000421141 CCDC194A0A1B0GVG4 234 aa12.51□□□□□ -0.41
PTCH1-206ENST00000421141 CCDC173Q0VFZ6 552 aa12.51□□□□□ -0.41
PTCH1-206ENST00000421141 TMTC2Q8N394 836 aa12.51□□□□□ -0.41
PTCH1-206ENST00000421141 C8orf76Q96K31 380 aa12.51□□□□□ -0.41
PTCH1-206ENST00000421141 RHPN1Q8TCX5 695 aa12.5□□□□□ -0.41
PTCH1-206ENST00000421141 LUC7LQ9NQ29 371 aaKnown RBP12.5□□□□□ -0.41
PTCH1-206ENST00000421141 ROBO2Q9HCK4 1378 aa12.5□□□□□ -0.41
PTCH1-206ENST00000421141 PUM3Q15397 648 aaKnown RBP12.5□□□□□ -0.41
PTCH1-206ENST00000421141 FAM89AQ96GI7 184 aa12.5□□□□□ -0.41
PTCH1-206ENST00000421141 MEIS3Q99687 375 aa12.5□□□□□ -0.41
PTCH1-206ENST00000421141 HMGN5P82970 282 aaKnown RBP12.5□□□□□ -0.41
PTCH1-206ENST00000421141 PAG1Q9NWQ8 432 aa12.5□□□□□ -0.41
PTCH1-206ENST00000421141 USP6P35125 1406 aa12.5□□□□□ -0.41
PTCH1-206ENST00000421141 PPRC1Q5VV67 1664 aaKnown RBP12.5□□□□□ -0.41
PTCH1-206ENST00000421141 GOLGA8AA7E2F4 631 aa12.5□□□□□ -0.41
PTCH1-206ENST00000421141 TSHZ2Q9NRE2 1034 aa12.5□□□□□ -0.41
PTCH1-206ENST00000421141 CCDC39Q9UFE4 941 aa12.5□□□□□ -0.41
PTCH1-206ENST00000421141 MCM5P33992 734 aa12.5□□□□□ -0.41
PTCH1-206ENST00000421141 MAGEB6Q8N7X4 407 aa12.5□□□□□ -0.41
PTCH1-206ENST00000421141 TANGO6Q9C0B7 1094 aa12.5□□□□□ -0.41
PTCH1-206ENST00000421141 ZNHIT6Q9NWK9 470 aaKnown RBP12.5□□□□□ -0.41
PTCH1-206ENST00000421141 CWF19L2Q2TBE0 894 aaKnown RBP12.49□□□□□ -0.41
PTCH1-206ENST00000421141 VAT1LQ9HCJ6 419 aa12.49□□□□□ -0.41
PTCH1-206ENST00000421141 PIK3C2BO00750 1634 aa12.49□□□□□ -0.41
PTCH1-206ENST00000421141 ITGA6P23229 1130 aa12.49□□□□□ -0.41
PTCH1-206ENST00000421141 SPATA32Q96LK8 384 aa12.49□□□□□ -0.41
PTCH1-206ENST00000421141 MSL1Q68DK7 614 aa12.49□□□□□ -0.41
PTCH1-206ENST00000421141 DDX11Q96FC9 970 aa12.49□□□□□ -0.41
PTCH1-206ENST00000421141 SLC9C2Q5TAH2 1124 aa12.49□□□□□ -0.41
PTCH1-206ENST00000421141 CCDC150Q8NCX0 1101 aa12.49□□□□□ -0.41
PTCH1-206ENST00000421141 VTI1AQ96AJ9 217 aa12.49□□□□□ -0.41
PTCH1-206ENST00000421141 SMC2O95347 1197 aa12.49□□□□□ -0.41
PTCH1-206ENST00000421141 SAMM50Q9Y512 469 aa12.49□□□□□ -0.41
PTCH1-206ENST00000421141 BRPF1P55201 1214 aaPredicted RBP12.48□□□□□ -0.41
PTCH1-206ENST00000421141 H7C1D1 291 aa12.48□□□□□ -0.41
PTCH1-206ENST00000421141 WTAPQ15007 396 aa12.48□□□□□ -0.41
PTCH1-206ENST00000421141 SH2D4AQ9H788 454 aa12.48□□□□□ -0.41
PTCH1-206ENST00000421141 PLA2R1Q13018 1463 aa12.48□□□□□ -0.41
PTCH1-206ENST00000421141 INO80Q9ULG1 1556 aaPredicted RBP12.48□□□□□ -0.41
PTCH1-206ENST00000421141 HCLS1P14317 486 aaPredicted RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms