RNA–Protein interactions for RNA: ENST00000420996.2

UPF3AP3-201, Transcript of UPF3A pseudogene 3, humanhuman

BASIC

Gene UPF3AP3, Length 769 nt, Biotype transcribed processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP3-201ENST00000420996 SH3TC1Q8TE82 1336 aa22.06■■□□□ 1.12
UPF3AP3-201ENST00000420996 CHL1O00533 1208 aa22.06■■□□□ 1.12
UPF3AP3-201ENST00000420996 GRAPQ13588 217 aa22.06■■□□□ 1.12
UPF3AP3-201ENST00000420996 GRAPLQ8TC17 118 aaPredicted RBP22.06■■□□□ 1.12
UPF3AP3-201ENST00000420996 CDHR2Q9BYE9 1310 aa22.06■■□□□ 1.12
UPF3AP3-201ENST00000420996 TAF1P21675 1872 aa22.05■■□□□ 1.12
UPF3AP3-201ENST00000420996 GMPSP49915 693 aaPredicted RBP22.05■■□□□ 1.12
UPF3AP3-201ENST00000420996 CIAPIN1Q6FI81 312 aa22.05■■□□□ 1.12
UPF3AP3-201ENST00000420996 PAXIP1Q6ZW49 1069 aaPredicted RBP22.05■■□□□ 1.12
UPF3AP3-201ENST00000420996 TLL2Q9Y6L7 1015 aa22.05■■□□□ 1.12
UPF3AP3-201ENST00000420996 TNIP1Q15025 636 aa22.04■■□□□ 1.12
UPF3AP3-201ENST00000420996 NEUROD2Q15784 382 aa22.04■■□□□ 1.12
UPF3AP3-201ENST00000420996 CYP4F22Q6NT55 531 aa22.04■■□□□ 1.12
UPF3AP3-201ENST00000420996 TMC4Q7Z404 712 aa22.04■■□□□ 1.12
UPF3AP3-201ENST00000420996 GPR101Q96P66 508 aaPredicted RBP22.04■■□□□ 1.12
UPF3AP3-201ENST00000420996 PGAP2Q9UHJ9 254 aa22.04■■□□□ 1.12
UPF3AP3-201ENST00000420996 KRT24Q2M2I5 525 aa22.03■■□□□ 1.12
UPF3AP3-201ENST00000420996 RAD17O75943 681 aa22.02■■□□□ 1.12
UPF3AP3-201ENST00000420996 PLBD2Q8NHP8 589 aa22.02■■□□□ 1.12
UPF3AP3-201ENST00000420996 ZC3H15Q8WU90 426 aaKnown RBP22.02■■□□□ 1.12
UPF3AP3-201ENST00000420996 BEGAINQ9BUH8 593 aa22.02■■□□□ 1.12
UPF3AP3-201ENST00000420996 BCL2L13Q9BXK5 485 aa22.02■■□□□ 1.12
UPF3AP3-201ENST00000420996 CHPF2Q9P2E5 772 aa22.02■■□□□ 1.12
UPF3AP3-201ENST00000420996 LRRC37AA6NMS7 1700 aa22.01■■□□□ 1.11
UPF3AP3-201ENST00000420996 DDX60Q8IY21 1712 aaKnown RBP22.01■■□□□ 1.11
UPF3AP3-201ENST00000420996 GRM1Q13255 1194 aa22.01■■□□□ 1.11
UPF3AP3-201ENST00000420996 CCDC146Q8IYE0 955 aa22.01■■□□□ 1.11
UPF3AP3-201ENST00000420996 TRIM35Q9UPQ4 493 aa22.01■■□□□ 1.11
UPF3AP3-201ENST00000420996 LAS1LQ9Y4W2 734 aaKnown RBP22.01■■□□□ 1.11
UPF3AP3-201ENST00000420996 MAP2K2P36507 400 aa22■■□□□ 1.11
UPF3AP3-201ENST00000420996 ANKRD13DQ6ZTN6 518 aa22■■□□□ 1.11
UPF3AP3-201ENST00000420996 RUNDC1Q96C34 613 aa22■■□□□ 1.11
UPF3AP3-201ENST00000420996 GLIS2Q9BZE0 524 aaPredicted RBP22■■□□□ 1.11
UPF3AP3-201ENST00000420996 DUOX1Q9NRD9 1551 aa21.99■■□□□ 1.11
UPF3AP3-201ENST00000420996 YDJCA8MPS7 323 aa21.99■■□□□ 1.11
UPF3AP3-201ENST00000420996 CELF2O95319 508 aaKnown RBP21.99■■□□□ 1.11
UPF3AP3-201ENST00000420996 HOXB7P09629 217 aa21.99■■□□□ 1.11
UPF3AP3-201ENST00000420996 HIRAP54198 1017 aaPredicted RBP21.99■■□□□ 1.11
UPF3AP3-201ENST00000420996 HDGFL1Q5TGJ6 251 aa21.99■■□□□ 1.11
UPF3AP3-201ENST00000420996 SAPCD2Q86UD0 394 aa21.99■■□□□ 1.11
UPF3AP3-201ENST00000420996 HHIPL1Q96JK4 782 aa21.99■■□□□ 1.11
UPF3AP3-201ENST00000420996 ISCA1Q9BUE6 129 aa21.99■■□□□ 1.11
UPF3AP3-201ENST00000420996 CNOT7Q9UIV1 285 aaKnown RBP21.99■■□□□ 1.11
UPF3AP3-201ENST00000420996 MYBBP1AQ9BQG0 1328 aaKnown RBP21.99■■□□□ 1.11
UPF3AP3-201ENST00000420996 SF3B3Q15393 1217 aaKnown RBP21.98■■□□□ 1.11
UPF3AP3-201ENST00000420996 ABHD8Q96I13 439 aa21.98■■□□□ 1.11
UPF3AP3-201ENST00000420996 DBF4Q9UBU7 674 aaPredicted RBP21.98■■□□□ 1.11
UPF3AP3-201ENST00000420996 H7C1D1 291 aa21.97■■□□□ 1.11
UPF3AP3-201ENST00000420996 AOC2O75106 756 aa21.97■■□□□ 1.11
UPF3AP3-201ENST00000420996 CDC37L1Q7L3B6 337 aa21.97■■□□□ 1.11
UPF3AP3-201ENST00000420996 ZNF428Q96B54 188 aa21.97■■□□□ 1.11
UPF3AP3-201ENST00000420996 FAM89AQ96GI7 184 aa21.97■■□□□ 1.11
UPF3AP3-201ENST00000420996 WASHC4Q2M389 1173 aa21.96■■□□□ 1.11
UPF3AP3-201ENST00000420996 TRPM4Q8TD43 1214 aa21.96■■□□□ 1.11
UPF3AP3-201ENST00000420996 DPF2Q92785 391 aa21.96■■□□□ 1.11
UPF3AP3-201ENST00000420996 ATP5J2-PTCD1G3V325 749 aa21.95■■□□□ 1.1
UPF3AP3-201ENST00000420996 WDR43Q15061 677 aaKnown RBP eCLIP21.95■■□□□ 1.1
UPF3AP3-201ENST00000420996 CELF1Q92879 486 aaKnown RBP21.95■■□□□ 1.1
UPF3AP3-201ENST00000420996 HYPKQ9NX55 129 aa21.95■■□□□ 1.1
UPF3AP3-201ENST00000420996 NSFL1CQ9UNZ2 370 aaKnown RBP21.95■■□□□ 1.1
UPF3AP3-201ENST00000420996 TRIM28Q13263 835 aaKnown RBP21.94■■□□□ 1.1
UPF3AP3-201ENST00000420996 MICALL2Q8IY33 904 aa21.94■■□□□ 1.1
UPF3AP3-201ENST00000420996 CFAP44Q96MT7 982 aa21.94■■□□□ 1.1
UPF3AP3-201ENST00000420996 SHTN1A0MZ66 631 aa21.93■■□□□ 1.1
UPF3AP3-201ENST00000420996 PSMD14O00487 310 aa21.93■■□□□ 1.1
UPF3AP3-201ENST00000420996 DDX10Q13206 875 aaKnown RBP21.93■■□□□ 1.1
UPF3AP3-201ENST00000420996 ZNF408Q9H9D4 720 aa21.93■■□□□ 1.1
UPF3AP3-201ENST00000420996 ADAMTS8Q9UP79 889 aa21.93■■□□□ 1.1
UPF3AP3-201ENST00000420996 ZBTB12Q9Y330 459 aaPredicted RBP21.93■■□□□ 1.1
UPF3AP3-201ENST00000420996 C6orf229H3BNL8 230 aa21.92■■□□□ 1.1
UPF3AP3-201ENST00000420996 CA12O43570 354 aa21.92■■□□□ 1.1
UPF3AP3-201ENST00000420996 DUSP27Q5VZP5 1158 aa21.92■■□□□ 1.1
UPF3AP3-201ENST00000420996 DBNDD1Q9H9R9 158 aa21.92■■□□□ 1.1
UPF3AP3-201ENST00000420996 POLLQ9UGP5 575 aa21.92■■□□□ 1.1
UPF3AP3-201ENST00000420996 IRS4O14654 1257 aaPredicted RBP21.91■■□□□ 1.1
UPF3AP3-201ENST00000420996 RIMBP2O15034 1052 aa21.91■■□□□ 1.1
UPF3AP3-201ENST00000420996 BRPF1P55201 1214 aaPredicted RBP21.91■■□□□ 1.1
UPF3AP3-201ENST00000420996 GPSM2P81274 684 aa21.91■■□□□ 1.1
UPF3AP3-201ENST00000420996 USP48Q86UV5 1035 aa21.91■■□□□ 1.1
UPF3AP3-201ENST00000420996 EYA3Q99504 573 aa21.91■■□□□ 1.1
UPF3AP3-201ENST00000420996 TSKSQ9UJT2 592 aa21.91■■□□□ 1.1
UPF3AP3-201ENST00000420996 POLR2AP24928 1970 aaKnown RBP21.9■■□□□ 1.1
UPF3AP3-201ENST00000420996 RPS12P25398 132 aaKnown RBP21.9■■□□□ 1.1
UPF3AP3-201ENST00000420996 RPS8P62241 208 aaKnown RBP21.9■■□□□ 1.1
UPF3AP3-201ENST00000420996 RTL5Q5HYW3 569 aaPredicted RBP21.9■■□□□ 1.1
UPF3AP3-201ENST00000420996 SAMD7Q7Z3H4 446 aa21.9■■□□□ 1.1
UPF3AP3-201ENST00000420996 COL4A1P02462 1669 aa21.9■■□□□ 1.1
UPF3AP3-201ENST00000420996 MBIPQ9NS73 344 aa21.89■■□□□ 1.09
UPF3AP3-201ENST00000420996 ECE2O60344 883 aa21.88■■□□□ 1.09
UPF3AP3-201ENST00000420996 ZBTB38Q8NAP3 1195 aaPredicted RBP21.88■■□□□ 1.09
UPF3AP3-201ENST00000420996 TBC1D16Q8TBP0 767 aa21.88■■□□□ 1.09
UPF3AP3-201ENST00000420996 ZNF853P0CG23 659 aa21.87■■□□□ 1.09
UPF3AP3-201ENST00000420996 HSP90B1P14625 803 aaKnown RBP21.87■■□□□ 1.09
UPF3AP3-201ENST00000420996 NOGQ13253 232 aa21.87■■□□□ 1.09
UPF3AP3-201ENST00000420996 DOK7Q18PE1 504 aa21.87■■□□□ 1.09
UPF3AP3-201ENST00000420996 TBC1D10BQ4KMP7 808 aaPredicted RBP21.87■■□□□ 1.09
UPF3AP3-201ENST00000420996 RIC3Q7Z5B4 369 aa21.87■■□□□ 1.09
UPF3AP3-201ENST00000420996 KCNQ5Q9NR82 932 aa21.87■■□□□ 1.09
UPF3AP3-201ENST00000420996 HUNKP57058 714 aa21.86■■□□□ 1.09
UPF3AP3-201ENST00000420996 GOLGA2Q08379 1002 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms