RNA–Protein interactions for RNA: ENST00000420717.5

PTPN18-204, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 599 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-204ENST00000420717 NFKBIEO00221 500 aa18.28■□□□□ 0.52
PTPN18-204ENST00000420717 CTSWP56202 376 aa18.28■□□□□ 0.52
PTPN18-204ENST00000420717 GRAPQ13588 217 aa18.28■□□□□ 0.52
PTPN18-204ENST00000420717 GRIPAP1Q4V328 841 aa18.28■□□□□ 0.52
PTPN18-204ENST00000420717 TMC4Q7Z404 712 aa18.28■□□□□ 0.52
PTPN18-204ENST00000420717 GRAPLQ8TC17 118 aaPredicted RBP18.28■□□□□ 0.52
PTPN18-204ENST00000420717 DUOX1Q9NRD9 1551 aa18.27■□□□□ 0.52
PTPN18-204ENST00000420717 BBOX1O75936 387 aa18.27■□□□□ 0.52
PTPN18-204ENST00000420717 CCT4P50991 539 aaKnown RBP18.27■□□□□ 0.52
PTPN18-204ENST00000420717 CCDC152Q4G0S7 254 aa18.27■□□□□ 0.52
PTPN18-204ENST00000420717 CCDC93Q567U6 631 aa18.27■□□□□ 0.52
PTPN18-204ENST00000420717 DDX46Q7L014 1031 aaKnown RBP18.27■□□□□ 0.52
PTPN18-204ENST00000420717 PPEF1O14829 653 aaPredicted RBP18.26■□□□□ 0.51
PTPN18-204ENST00000420717 IPO8O15397 1037 aaKnown RBP18.26■□□□□ 0.51
PTPN18-204ENST00000420717 C21orf2O43822 256 aa18.26■□□□□ 0.51
PTPN18-204ENST00000420717 BCAR3O75815 825 aa18.26■□□□□ 0.51
PTPN18-204ENST00000420717 RTL5Q5HYW3 569 aaPredicted RBP18.26■□□□□ 0.51
PTPN18-204ENST00000420717 SLC4A10Q6U841 1118 aa18.26■□□□□ 0.51
PTPN18-204ENST00000420717 TTLL11Q8NHH1 800 aa18.26■□□□□ 0.51
PTPN18-204ENST00000420717 ZC3H4Q9UPT8 1303 aaKnown RBP18.25■□□□□ 0.51
PTPN18-204ENST00000420717 CCDC88AQ3V6T2 1871 aa18.25■□□□□ 0.51
PTPN18-204ENST00000420717 CSF1RP07333 972 aa18.25■□□□□ 0.51
PTPN18-204ENST00000420717 TRIM27P14373 513 aa18.25■□□□□ 0.51
PTPN18-204ENST00000420717 INTS3Q68E01 1043 aaKnown RBP18.25■□□□□ 0.51
PTPN18-204ENST00000420717 ATF7IPQ6VMQ6 1270 aa18.25■□□□□ 0.51
PTPN18-204ENST00000420717 ATP6V0A2Q9Y487 856 aa18.25■□□□□ 0.51
PTPN18-204ENST00000420717 ARHGAP27Q6ZUM4 889 aa18.24■□□□□ 0.51
PTPN18-204ENST00000420717 RTKN2Q8IZC4 609 aa18.24■□□□□ 0.51
PTPN18-204ENST00000420717 PSMD1Q99460 953 aa18.24■□□□□ 0.51
PTPN18-204ENST00000420717 A0A1B0GUL6 1792 aa18.24■□□□□ 0.51
PTPN18-204ENST00000420717 FOXO4P98177 505 aa18.23■□□□□ 0.51
PTPN18-204ENST00000420717 SP8Q8IXZ3 490 aa18.23■□□□□ 0.51
PTPN18-204ENST00000420717 JARID2Q92833 1246 aaPredicted RBP18.23■□□□□ 0.51
PTPN18-204ENST00000420717 USP44Q9H0E7 712 aa18.23■□□□□ 0.51
PTPN18-204ENST00000420717 TAOK3Q9H2K8 898 aa18.23■□□□□ 0.51
PTPN18-204ENST00000420717 C9orf78Q9NZ63 289 aaPredicted RBP18.23■□□□□ 0.51
PTPN18-204ENST00000420717 SPEF2Q9C093 1822 aa18.23■□□□□ 0.51
PTPN18-204ENST00000420717 NBPF7P0C2Y1 421 aaPredicted RBP18.22■□□□□ 0.51
PTPN18-204ENST00000420717 LMNB1P20700 586 aa18.22■□□□□ 0.51
PTPN18-204ENST00000420717 PRELPP51888 382 aa18.22■□□□□ 0.51
PTPN18-204ENST00000420717 FKBP4Q02790 459 aaKnown RBP eCLIP18.22■□□□□ 0.51
PTPN18-204ENST00000420717 ZKSCAN2Q63HK3 967 aa18.22■□□□□ 0.51
PTPN18-204ENST00000420717 CELF1Q92879 486 aaKnown RBP18.22■□□□□ 0.51
PTPN18-204ENST00000420717 KAZALD1Q96I82 304 aa18.22■□□□□ 0.51
PTPN18-204ENST00000420717 RASSF7Q02833 373 aa18.21■□□□□ 0.51
PTPN18-204ENST00000420717 RABL6Q3YEC7 729 aaPredicted RBP18.21■□□□□ 0.51
PTPN18-204ENST00000420717 RTFDC1Q9BY42 306 aaPredicted RBP18.21■□□□□ 0.51
PTPN18-204ENST00000420717 GREM2Q9H772 168 aa18.21■□□□□ 0.51
PTPN18-204ENST00000420717 RPS8P62241 208 aaKnown RBP18.2■□□□□ 0.5
PTPN18-204ENST00000420717 OLFM4Q6UX06 510 aa18.2■□□□□ 0.5
PTPN18-204ENST00000420717 FAM161AQ3B820 660 aa18.19■□□□□ 0.5
PTPN18-204ENST00000420717 EPHA10Q5JZY3 1008 aa18.19■□□□□ 0.5
PTPN18-204ENST00000420717 SUCLG2Q96I99 432 aa18.19■□□□□ 0.5
PTPN18-204ENST00000420717 CDC5LQ99459 802 aaKnown RBP18.19■□□□□ 0.5
PTPN18-204ENST00000420717 SEC31BQ9NQW1 1179 aa18.19■□□□□ 0.5
PTPN18-204ENST00000420717 RCAN3Q9UKA8 241 aa18.19■□□□□ 0.5
PTPN18-204ENST00000420717 YY1P25490 414 aa18.18■□□□□ 0.5
PTPN18-204ENST00000420717 C9orf131Q5VYM1 1079 aa18.18■□□□□ 0.5
PTPN18-204ENST00000420717 SLC51AQ86UW1 340 aa18.18■□□□□ 0.5
PTPN18-204ENST00000420717 FRAT1Q92837 279 aaPredicted RBP18.18■□□□□ 0.5
PTPN18-204ENST00000420717 VPS33BQ9H267 617 aa18.18■□□□□ 0.5
PTPN18-204ENST00000420717 ZNF219Q9P2Y4 722 aaPredicted RBP18.18■□□□□ 0.5
PTPN18-204ENST00000420717 ANKRD18AQ8IVF6 992 aa18.17■□□□□ 0.5
PTPN18-204ENST00000420717 BSDC1Q9NW68 430 aaPredicted RBP18.17■□□□□ 0.5
PTPN18-204ENST00000420717 PODXL2Q9NZ53 605 aa18.17■□□□□ 0.5
PTPN18-204ENST00000420717 COL4A5P29400 1685 aa18.17■□□□□ 0.5
PTPN18-204ENST00000420717 ITGA6P23229 1130 aa18.16■□□□□ 0.5
PTPN18-204ENST00000420717 ANKRD44Q8N8A2 993 aa18.16■□□□□ 0.5
PTPN18-204ENST00000420717 RNF181Q9P0P0 153 aa18.16■□□□□ 0.5
PTPN18-204ENST00000420717 TNNQ9UQP3 1299 aa18.16■□□□□ 0.5
PTPN18-204ENST00000420717 LMBR1LQ6UX01 489 aa18.15■□□□□ 0.5
PTPN18-204ENST00000420717 SUPT20HQ8NEM7 779 aa18.15■□□□□ 0.5
PTPN18-204ENST00000420717 TMX4Q9H1E5 349 aaPredicted RBP18.15■□□□□ 0.5
PTPN18-204ENST00000420717 BICC1Q9H694 974 aaKnown RBP18.15■□□□□ 0.5
PTPN18-204ENST00000420717 HDAC5Q9UQL6 1122 aa18.15■□□□□ 0.5
PTPN18-204ENST00000420717 ANKRD18BA2A2Z9 1011 aa18.14■□□□□ 0.49
PTPN18-204ENST00000420717 GNAI3P08754 354 aa18.14■□□□□ 0.49
PTPN18-204ENST00000420717 UBTFL1P0CB47 393 aaPredicted RBP18.14■□□□□ 0.49
PTPN18-204ENST00000420717 IARSP41252 1262 aaKnown RBP18.14■□□□□ 0.49
PTPN18-204ENST00000420717 DZIP1LQ8IYY4 767 aaKnown RBP18.14■□□□□ 0.49
PTPN18-204ENST00000420717 MPNDQ8N594 471 aa18.14■□□□□ 0.49
PTPN18-204ENST00000420717 TMEM57Q8N5G2 664 aa18.14■□□□□ 0.49
PTPN18-204ENST00000420717 CCDC85AQ96PX6 553 aaPredicted RBP18.14■□□□□ 0.49
PTPN18-204ENST00000420717 MEIS3Q99687 375 aa18.14■□□□□ 0.49
PTPN18-204ENST00000420717 WDR90Q96KV7 1748 aa18.13■□□□□ 0.49
PTPN18-204ENST00000420717 MS4A1P11836 297 aa18.13■□□□□ 0.49
PTPN18-204ENST00000420717 RLBP1P12271 317 aa18.13■□□□□ 0.49
PTPN18-204ENST00000420717 IFIT5Q13325 482 aaKnown RBP18.13■□□□□ 0.49
PTPN18-204ENST00000420717 DPP8Q6V1X1 898 aaPredicted RBP18.13■□□□□ 0.49
PTPN18-204ENST00000420717 IGHMBP2P38935 993 aaKnown RBP18.12■□□□□ 0.49
PTPN18-204ENST00000420717 MTX1Q13505 466 aa18.12■□□□□ 0.49
PTPN18-204ENST00000420717 YTHDC1Q96MU7 727 aaKnown RBP18.12■□□□□ 0.49
PTPN18-204ENST00000420717 ZNF277Q9NRM2 450 aaPredicted RBP18.12■□□□□ 0.49
PTPN18-204ENST00000420717 XDHP47989 1333 aa18.12■□□□□ 0.49
PTPN18-204ENST00000420717 PSME4Q14997 1843 aa18.12■□□□□ 0.49
PTPN18-204ENST00000420717 GPSM2P81274 684 aa18.11■□□□□ 0.49
PTPN18-204ENST00000420717 KIAA2012Q0VF49 1180 aa18.11■□□□□ 0.49
PTPN18-204ENST00000420717 CCDC57Q2TAC2 916 aa18.11■□□□□ 0.49
PTPN18-204ENST00000420717 FTSJ3Q8IY81 847 aaKnown RBP18.11■□□□□ 0.49
PTPN18-204ENST00000420717 CLUAP1Q96AJ1 413 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms