RNA–Protein interactions for RNA: ENST00000420508.1

AP000550.1-201, humanhuman

TSL 1 (best) BASIC

Gene AP000550.1, Length 4,833 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000550.1-201ENST00000420508 CLCN1P35523 988 aa17.18■□□□□ 0.34
AP000550.1-201ENST00000420508 METAP2P50579 478 aaKnown RBP eCLIP17.18■□□□□ 0.34
AP000550.1-201ENST00000420508 RNF113AO15541 343 aaKnown RBP17.18■□□□□ 0.34
AP000550.1-201ENST00000420508 TSHZ3Q63HK5 1081 aa17.18■□□□□ 0.34
AP000550.1-201ENST00000420508 CREB3L3Q68CJ9 461 aa17.18■□□□□ 0.34
AP000550.1-201ENST00000420508 ZNF790Q6PG37 636 aa17.18■□□□□ 0.34
AP000550.1-201ENST00000420508 ZGPATQ8N5A5 531 aaKnown RBP17.18■□□□□ 0.34
AP000550.1-201ENST00000420508 RAB34Q9BZG1 259 aa17.18■□□□□ 0.34
AP000550.1-201ENST00000420508 RBM27Q9P2N5 1060 aaKnown RBP17.18■□□□□ 0.34
AP000550.1-201ENST00000420508 ANXA1P04083 346 aa17.18■□□□□ 0.34
AP000550.1-201ENST00000420508 PPP4R3BQ5MIZ7 849 aa17.18■□□□□ 0.34
AP000550.1-201ENST00000420508 MFSD6Q6ZSS7 791 aa17.18■□□□□ 0.34
AP000550.1-201ENST00000420508 KRT24Q2M2I5 525 aa17.17■□□□□ 0.34
AP000550.1-201ENST00000420508 CAGE1Q8TC20 777 aa17.17■□□□□ 0.34
AP000550.1-201ENST00000420508 PRIMPOLQ96LW4 560 aa17.17■□□□□ 0.34
AP000550.1-201ENST00000420508 LRRC59Q96AG4 307 aaKnown RBP17.17■□□□□ 0.34
AP000550.1-201ENST00000420508 QRICH2Q9H0J4 1663 aa17.17■□□□□ 0.34
AP000550.1-201ENST00000420508 IKQ13123 557 aaPredicted RBP17.17■□□□□ 0.34
AP000550.1-201ENST00000420508 TMEM67Q5HYA8 995 aa17.17■□□□□ 0.34
AP000550.1-201ENST00000420508 FAM200AQ8TCP9 573 aa17.17■□□□□ 0.34
AP000550.1-201ENST00000420508 TM6SF1Q9BZW5 370 aa17.17■□□□□ 0.34
AP000550.1-201ENST00000420508 NCKAP5LQ9HCH0 1330 aa17.17■□□□□ 0.34
AP000550.1-201ENST00000420508 FGFR1OPO95684 399 aaKnown RBP17.17■□□□□ 0.34
AP000550.1-201ENST00000420508 GSTO1P78417 241 aa17.17■□□□□ 0.34
AP000550.1-201ENST00000420508 DZIP1Q86YF9 867 aaKnown RBP17.17■□□□□ 0.34
AP000550.1-201ENST00000420508 LLPHQ9BRT6 129 aaKnown RBP17.17■□□□□ 0.34
AP000550.1-201ENST00000420508 SEC63Q9UGP8 760 aaKnown RBP17.17■□□□□ 0.34
AP000550.1-201ENST00000420508 IGSF1Q8N6C5 1336 aa17.16■□□□□ 0.34
AP000550.1-201ENST00000420508 KRT18P05783 430 aaKnown RBP17.16■□□□□ 0.34
AP000550.1-201ENST00000420508 ZNF853P0CG23 659 aa17.16■□□□□ 0.34
AP000550.1-201ENST00000420508 SETQ01105 290 aaPredicted RBP17.16■□□□□ 0.34
AP000550.1-201ENST00000420508 G2E3Q7L622 706 aa17.16■□□□□ 0.34
AP000550.1-201ENST00000420508 CCDC191Q8NCU4 936 aa17.16■□□□□ 0.34
AP000550.1-201ENST00000420508 CCDC150Q8NCX0 1101 aa17.16■□□□□ 0.34
AP000550.1-201ENST00000420508 CLIP2Q9UDT6 1046 aa17.16■□□□□ 0.34
AP000550.1-201ENST00000420508 USP19O94966 1318 aa17.16■□□□□ 0.34
AP000550.1-201ENST00000420508 NAP1L1P55209 391 aaKnown RBP17.16■□□□□ 0.34
AP000550.1-201ENST00000420508 PDE4BQ07343 736 aa17.16■□□□□ 0.34
AP000550.1-201ENST00000420508 KLHL34Q8N239 644 aa17.16■□□□□ 0.34
AP000550.1-201ENST00000420508 CCDC85AQ96PX6 553 aaPredicted RBP17.16■□□□□ 0.34
AP000550.1-201ENST00000420508 METP08581 1390 aa17.16■□□□□ 0.34
AP000550.1-201ENST00000420508 PTCH1Q13635 1447 aa17.16■□□□□ 0.34
AP000550.1-201ENST00000420508 NUTM2BA6NNL0 878 aaPredicted RBP17.16■□□□□ 0.34
AP000550.1-201ENST00000420508 NUTM2EB1AL46 878 aaPredicted RBP17.16■□□□□ 0.34
AP000550.1-201ENST00000420508 USP5P45974 858 aa17.16■□□□□ 0.34
AP000550.1-201ENST00000420508 EIF4A1P60842 406 aaKnown RBP17.16■□□□□ 0.34
AP000550.1-201ENST00000420508 CFAP100Q494V2 611 aa17.16■□□□□ 0.34
AP000550.1-201ENST00000420508 NUTM2AQ8IVF1 878 aaPredicted RBP17.16■□□□□ 0.34
AP000550.1-201ENST00000420508 BRF1Q92994 677 aa17.16■□□□□ 0.34
AP000550.1-201ENST00000420508 CWC15Q9P013 229 aaKnown RBP17.16■□□□□ 0.34
AP000550.1-201ENST00000420508 CAMK4Q16566 473 aa17.16■□□□□ 0.34
AP000550.1-201ENST00000420508 GTPBP4Q9BZE4 634 aaKnown RBP17.16■□□□□ 0.34
AP000550.1-201ENST00000420508 SLC52A2Q9HAB3 445 aa17.16■□□□□ 0.34
AP000550.1-201ENST00000420508 SGSM2O43147 1006 aa17.15■□□□□ 0.34
AP000550.1-201ENST00000420508 AK2P54819 239 aa17.15■□□□□ 0.34
AP000550.1-201ENST00000420508 PTPN14Q15678 1187 aa17.15■□□□□ 0.34
AP000550.1-201ENST00000420508 CHRNA2Q15822 529 aa17.15■□□□□ 0.34
AP000550.1-201ENST00000420508 NFATC2IPQ8NCF5 419 aa17.15■□□□□ 0.34
AP000550.1-201ENST00000420508 SSH3Q8TE77 659 aa17.15■□□□□ 0.34
AP000550.1-201ENST00000420508 CCDC66A2RUB6 948 aa17.15■□□□□ 0.34
AP000550.1-201ENST00000420508 BAG3O95817 575 aa17.15■□□□□ 0.34
AP000550.1-201ENST00000420508 XRCC6P12956 609 aaKnown RBP eCLIP17.15■□□□□ 0.34
AP000550.1-201ENST00000420508 ZNF165P49910 485 aa17.15■□□□□ 0.34
AP000550.1-201ENST00000420508 DHX32Q7L7V1 743 aaKnown RBP17.15■□□□□ 0.34
AP000550.1-201ENST00000420508 USP48Q86UV5 1035 aa17.15■□□□□ 0.34
AP000550.1-201ENST00000420508 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.15■□□□□ 0.34
AP000550.1-201ENST00000420508 ZC3H13Q5T200 1668 aaKnown RBP17.15■□□□□ 0.34
AP000550.1-201ENST00000420508 KDRP35968 1356 aa17.15■□□□□ 0.34
AP000550.1-201ENST00000420508 KIF20AO95235 890 aa17.15■□□□□ 0.34
AP000550.1-201ENST00000420508 BRAPQ7Z569 592 aa17.15■□□□□ 0.34
AP000550.1-201ENST00000420508 KIF18AQ8NI77 898 aa17.15■□□□□ 0.34
AP000550.1-201ENST00000420508 DDX46Q7L014 1031 aaKnown RBP17.14■□□□□ 0.34
AP000550.1-201ENST00000420508 FILIP1Q7Z7B0 1213 aa17.14■□□□□ 0.33
AP000550.1-201ENST00000420508 CNNM3Q8NE01 707 aa17.14■□□□□ 0.33
AP000550.1-201ENST00000420508 MKNK2Q9HBH9 465 aa17.14■□□□□ 0.33
AP000550.1-201ENST00000420508 USP25Q9UHP3 1055 aa17.14■□□□□ 0.33
AP000550.1-201ENST00000420508 ADCY5O95622 1261 aa17.14■□□□□ 0.33
AP000550.1-201ENST00000420508 EIF3JO75822 258 aaKnown RBP17.14■□□□□ 0.33
AP000550.1-201ENST00000420508 CALM1P0DP23 149 aa17.14■□□□□ 0.33
AP000550.1-201ENST00000420508 CALM2P0DP24 149 aa17.14■□□□□ 0.33
AP000550.1-201ENST00000420508 CALM3P0DP25 149 aa17.14■□□□□ 0.33
AP000550.1-201ENST00000420508 GBP3Q9H0R5 595 aa17.14■□□□□ 0.33
AP000550.1-201ENST00000420508 OSBPL3Q9H4L5 887 aa17.14■□□□□ 0.33
AP000550.1-201ENST00000420508 BICC1Q9H694 974 aaKnown RBP17.14■□□□□ 0.33
AP000550.1-201ENST00000420508 MINDY4BA8MYZ0 360 aa17.13■□□□□ 0.33
AP000550.1-201ENST00000420508 SLC39A6Q13433 755 aa17.13■□□□□ 0.33
AP000550.1-201ENST00000420508 VSIG10Q8N0Z9 540 aa17.13■□□□□ 0.33
AP000550.1-201ENST00000420508 ADGRL3Q9HAR2 1447 aa17.13■□□□□ 0.33
AP000550.1-201ENST00000420508 CCDC102BQ68D86 513 aa17.13■□□□□ 0.33
AP000550.1-201ENST00000420508 CRNKL1Q9BZJ0 848 aaKnown RBP17.13■□□□□ 0.33
AP000550.1-201ENST00000420508 DLC1Q96QB1 1528 aa17.13■□□□□ 0.33
AP000550.1-201ENST00000420508 ZNF444Q8N0Y2 327 aaPredicted RBP17.13■□□□□ 0.33
AP000550.1-201ENST00000420508 ZNF397Q8NF99 534 aaPredicted RBP17.13■□□□□ 0.33
AP000550.1-201ENST00000420508 MRPS27Q92552 414 aaKnown RBP17.13■□□□□ 0.33
AP000550.1-201ENST00000420508 CAMSAP1Q5T5Y3 1602 aa17.13■□□□□ 0.33
AP000550.1-201ENST00000420508 A2ML1A8K2U0 1454 aa17.13■□□□□ 0.33
AP000550.1-201ENST00000420508 ZBTB43O43298 467 aa17.13■□□□□ 0.33
AP000550.1-201ENST00000420508 GNAQP50148 359 aa17.13■□□□□ 0.33
AP000550.1-201ENST00000420508 Q6ZUG5 572 aa17.13■□□□□ 0.33
AP000550.1-201ENST00000420508 ESR2Q92731 530 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms