RNA–Protein interactions for RNA: ENST00000420503.1

LINC00339-203, long intergenic non-protein coding RNA 339, humanhuman

TSL 3

Gene LINC00339, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-203ENST00000420503 DDX60Q8IY21 1712 aaKnown RBP16.95■□□□□ 0.3
LINC00339-203ENST00000420503 TMPOP42166 694 aaKnown RBP16.94■□□□□ 0.3
LINC00339-203ENST00000420503 DPP8Q6V1X1 898 aaPredicted RBP16.94■□□□□ 0.3
LINC00339-203ENST00000420503 GPR101Q96P66 508 aaPredicted RBP16.94■□□□□ 0.3
LINC00339-203ENST00000420503 ZIC5Q96T25 663 aa16.94■□□□□ 0.3
LINC00339-203ENST00000420503 ADARB2Q9NS39 739 aaKnown RBP16.94■□□□□ 0.3
LINC00339-203ENST00000420503 CELF2O95319 508 aaKnown RBP16.93■□□□□ 0.3
LINC00339-203ENST00000420503 MAP2K1Q02750 393 aaPredicted RBP16.93■□□□□ 0.3
LINC00339-203ENST00000420503 NEUROD2Q15784 382 aa16.93■□□□□ 0.3
LINC00339-203ENST00000420503 MPNDQ8N594 471 aa16.93■□□□□ 0.3
LINC00339-203ENST00000420503 ZNF408Q9H9D4 720 aa16.93■□□□□ 0.3
LINC00339-203ENST00000420503 ZBTB12Q9Y330 459 aaPredicted RBP16.93■□□□□ 0.3
LINC00339-203ENST00000420503 CASP8AP2Q9UKL3 1982 aa16.93■□□□□ 0.3
LINC00339-203ENST00000420503 LRRC37AA6NMS7 1700 aa16.93■□□□□ 0.3
LINC00339-203ENST00000420503 EGFRP00533 1210 aa16.92■□□□□ 0.3
LINC00339-203ENST00000420503 KIAA2012Q0VF49 1180 aa16.92■□□□□ 0.3
LINC00339-203ENST00000420503 TCIRG1Q13488 830 aa16.92■□□□□ 0.3
LINC00339-203ENST00000420503 CIAPIN1Q6FI81 312 aa16.92■□□□□ 0.3
LINC00339-203ENST00000420503 SP8Q8IXZ3 490 aa16.92■□□□□ 0.3
LINC00339-203ENST00000420503 CHPF2Q9P2E5 772 aa16.92■□□□□ 0.3
LINC00339-203ENST00000420503 TRMT112Q9UI30 125 aaKnown RBP16.92■□□□□ 0.3
LINC00339-203ENST00000420503 GRAPQ13588 217 aa16.91■□□□□ 0.3
LINC00339-203ENST00000420503 FAM161AQ3B820 660 aa16.91■□□□□ 0.3
LINC00339-203ENST00000420503 GRIPAP1Q4V328 841 aa16.91■□□□□ 0.3
LINC00339-203ENST00000420503 RTL5Q5HYW3 569 aaPredicted RBP16.91■□□□□ 0.3
LINC00339-203ENST00000420503 SAPCD2Q86UD0 394 aa16.91■□□□□ 0.3
LINC00339-203ENST00000420503 GRAPLQ8TC17 118 aaPredicted RBP16.91■□□□□ 0.3
LINC00339-203ENST00000420503 CELF1Q92879 486 aaKnown RBP16.91■□□□□ 0.3
LINC00339-203ENST00000420503 KCNQ5Q9NR82 932 aa16.91■□□□□ 0.3
LINC00339-203ENST00000420503 POLR2AP24928 1970 aaKnown RBP16.9■□□□□ 0.3
LINC00339-203ENST00000420503 ATP5J2-PTCD1G3V325 749 aa16.9■□□□□ 0.3
LINC00339-203ENST00000420503 BCL2L13Q9BXK5 485 aa16.9■□□□□ 0.3
LINC00339-203ENST00000420503 TRIM35Q9UPQ4 493 aa16.9■□□□□ 0.3
LINC00339-203ENST00000420503 LAS1LQ9Y4W2 734 aaKnown RBP16.9■□□□□ 0.3
LINC00339-203ENST00000420503 SH3TC1Q8TE82 1336 aa16.9■□□□□ 0.3
LINC00339-203ENST00000420503 BBOX1O75936 387 aa16.89■□□□□ 0.29
LINC00339-203ENST00000420503 ECE1P42892 770 aa16.89■□□□□ 0.29
LINC00339-203ENST00000420503 DDX46Q7L014 1031 aaKnown RBP16.89■□□□□ 0.29
LINC00339-203ENST00000420503 SAMD7Q7Z3H4 446 aa16.89■□□□□ 0.29
LINC00339-203ENST00000420503 FAM89AQ96GI7 184 aa16.89■□□□□ 0.29
LINC00339-203ENST00000420503 DBNDD1Q9H9R9 158 aa16.89■□□□□ 0.29
LINC00339-203ENST00000420503 SCN9AQ15858 1988 aa16.89■□□□□ 0.29
LINC00339-203ENST00000420503 RIMBP2O15034 1052 aa16.88■□□□□ 0.29
LINC00339-203ENST00000420503 MICALL2Q8IY33 904 aa16.88■□□□□ 0.29
LINC00339-203ENST00000420503 SUPT20HQ8NEM7 779 aa16.88■□□□□ 0.29
LINC00339-203ENST00000420503 PGAP2Q9UHJ9 254 aa16.88■□□□□ 0.29
LINC00339-203ENST00000420503 CNOT7Q9UIV1 285 aaKnown RBP16.88■□□□□ 0.29
LINC00339-203ENST00000420503 CCDC85CA6NKD9 419 aa16.87■□□□□ 0.29
LINC00339-203ENST00000420503 PSMD14O00487 310 aa16.87■□□□□ 0.29
LINC00339-203ENST00000420503 CHL1O00533 1208 aa16.87■□□□□ 0.29
LINC00339-203ENST00000420503 GPSM2P81274 684 aa16.87■□□□□ 0.29
LINC00339-203ENST00000420503 USP48Q86UV5 1035 aa16.87■□□□□ 0.29
LINC00339-203ENST00000420503 TMX4Q9H1E5 349 aaPredicted RBP16.87■□□□□ 0.29
LINC00339-203ENST00000420503 POLLQ9UGP5 575 aa16.87■□□□□ 0.29
LINC00339-203ENST00000420503 ASTN2O75129 1339 aaPredicted RBP16.87■□□□□ 0.29
LINC00339-203ENST00000420503 RTL9Q8NET4 1388 aa16.87■□□□□ 0.29
LINC00339-203ENST00000420503 DOK7Q18PE1 504 aa16.86■□□□□ 0.29
LINC00339-203ENST00000420503 TBC1D10BQ4KMP7 808 aaPredicted RBP16.86■□□□□ 0.29
LINC00339-203ENST00000420503 HSP90AB3PQ58FF7 597 aa16.86■□□□□ 0.29
LINC00339-203ENST00000420503 ISCA1Q9BUE6 129 aa16.86■□□□□ 0.29
LINC00339-203ENST00000420503 VPS33BQ9H267 617 aa16.86■□□□□ 0.29
LINC00339-203ENST00000420503 PNNQ9H307 717 aaKnown RBP16.86■□□□□ 0.29
LINC00339-203ENST00000420503 ADM5C9JUS6 153 aa16.85■□□□□ 0.29
LINC00339-203ENST00000420503 HDGFL1Q5TGJ6 251 aa16.85■□□□□ 0.29
LINC00339-203ENST00000420503 BEGAINQ9BUH8 593 aa16.85■□□□□ 0.29
LINC00339-203ENST00000420503 BABAM1Q9NWV8 329 aa16.85■□□□□ 0.29
LINC00339-203ENST00000420503 NSFL1CQ9UNZ2 370 aaKnown RBP16.85■□□□□ 0.29
LINC00339-203ENST00000420503 TNIP1Q15025 636 aa16.84■□□□□ 0.29
LINC00339-203ENST00000420503 RBM26Q5T8P6 1007 aaKnown RBP16.84■□□□□ 0.29
LINC00339-203ENST00000420503 PLBD2Q8NHP8 589 aa16.84■□□□□ 0.29
LINC00339-203ENST00000420503 JARID2Q92833 1246 aaPredicted RBP16.84■□□□□ 0.29
LINC00339-203ENST00000420503 MAP2K2P36507 400 aa16.83■□□□□ 0.28
LINC00339-203ENST00000420503 LMOD3Q0VAK6 560 aa16.83■□□□□ 0.28
LINC00339-203ENST00000420503 CDC37L1Q7L3B6 337 aa16.83■□□□□ 0.28
LINC00339-203ENST00000420503 CDHR2Q9BYE9 1310 aa16.83■□□□□ 0.28
LINC00339-203ENST00000420503 MCOLN1Q9GZU1 580 aa16.83■□□□□ 0.28
LINC00339-203ENST00000420503 SEC31BQ9NQW1 1179 aa16.83■□□□□ 0.28
LINC00339-203ENST00000420503 C6orf229H3BNL8 230 aa16.82■□□□□ 0.28
LINC00339-203ENST00000420503 ECE2O60344 883 aa16.82■□□□□ 0.28
LINC00339-203ENST00000420503 SF3B3Q15393 1217 aaKnown RBP16.82■□□□□ 0.28
LINC00339-203ENST00000420503 WASHC4Q2M389 1173 aa16.82■□□□□ 0.28
LINC00339-203ENST00000420503 ANKRD13DQ6ZTN6 518 aa16.82■□□□□ 0.28
LINC00339-203ENST00000420503 H7C1D1 291 aa16.81■□□□□ 0.28
LINC00339-203ENST00000420503 HUNKP57058 714 aa16.81■□□□□ 0.28
LINC00339-203ENST00000420503 DDX10Q13206 875 aaKnown RBP16.81■□□□□ 0.28
LINC00339-203ENST00000420503 RALBP1Q15311 655 aa16.81■□□□□ 0.28
LINC00339-203ENST00000420503 DUSP27Q5VZP5 1158 aa16.81■□□□□ 0.28
LINC00339-203ENST00000420503 ZC3H15Q8WU90 426 aaKnown RBP16.81■□□□□ 0.28
LINC00339-203ENST00000420503 CCDC85AQ96PX6 553 aaPredicted RBP16.81■□□□□ 0.28
LINC00339-203ENST00000420503 MBIPQ9NS73 344 aa16.81■□□□□ 0.28
LINC00339-203ENST00000420503 ADAMTS8Q9UP79 889 aa16.81■□□□□ 0.28
LINC00339-203ENST00000420503 WTIPA6NIX2 430 aaPredicted RBP16.8■□□□□ 0.28
LINC00339-203ENST00000420503 FAM155AB1AL88 458 aaPredicted RBP16.8■□□□□ 0.28
LINC00339-203ENST00000420503 IRS4O14654 1257 aaPredicted RBP16.8■□□□□ 0.28
LINC00339-203ENST00000420503 BRPF1P55201 1214 aaPredicted RBP16.8■□□□□ 0.28
LINC00339-203ENST00000420503 KRT26Q7Z3Y9 468 aa16.8■□□□□ 0.28
LINC00339-203ENST00000420503 TBC1D16Q8TBP0 767 aa16.8■□□□□ 0.28
LINC00339-203ENST00000420503 PHAXQ9H814 394 aaKnown RBP16.8■□□□□ 0.28
LINC00339-203ENST00000420503 SCAF8Q9UPN6 1271 aaKnown RBP16.8■□□□□ 0.28
LINC00339-203ENST00000420503 MYBBP1AQ9BQG0 1328 aaKnown RBP16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms