RNA–Protein interactions for RNA: ENST00000420482.5

PTPN4-202, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-202ENST00000420482 EAPPQ56P03 285 aaPredicted RBP27.51■■□□□ 1.99
PTPN4-202ENST00000420482 MPNDQ8N594 471 aa27.51■■□□□ 1.99
PTPN4-202ENST00000420482 FAM89AQ96GI7 184 aa27.51■■□□□ 1.99
PTPN4-202ENST00000420482 GJA3Q9Y6H8 435 aa27.51■■□□□ 1.99
PTPN4-202ENST00000420482 C8orf58Q8NAV2 365 aa27.5■■□□□ 1.99
PTPN4-202ENST00000420482 CLEC11AQ9Y240 323 aa27.5■■□□□ 1.99
PTPN4-202ENST00000420482 CCDC184Q52MB2 194 aa27.49■■□□□ 1.99
PTPN4-202ENST00000420482 NCBP3Q53F19 620 aaKnown RBP27.49■■□□□ 1.99
PTPN4-202ENST00000420482 RTFDC1Q9BY42 306 aaPredicted RBP27.49■■□□□ 1.99
PTPN4-202ENST00000420482 STK31Q9BXU1 1019 aa27.48■■□□□ 1.99
PTPN4-202ENST00000420482 PHAXQ9H814 394 aaKnown RBP27.48■■□□□ 1.99
PTPN4-202ENST00000420482 PASKQ96RG2 1323 aa27.47■■□□□ 1.99
PTPN4-202ENST00000420482 SF3B3Q15393 1217 aaKnown RBP27.47■■□□□ 1.99
PTPN4-202ENST00000420482 AOC3Q16853 763 aa27.47■■□□□ 1.99
PTPN4-202ENST00000420482 IRS4O14654 1257 aaPredicted RBP27.46■■□□□ 1.99
PTPN4-202ENST00000420482 WWC1Q8IX03 1113 aa27.46■■□□□ 1.99
PTPN4-202ENST00000420482 TNS4Q8IZW8 715 aa27.46■■□□□ 1.99
PTPN4-202ENST00000420482 ZBTB38Q8NAP3 1195 aaPredicted RBP27.46■■□□□ 1.99
PTPN4-202ENST00000420482 ZNF428Q96B54 188 aa27.46■■□□□ 1.99
PTPN4-202ENST00000420482 DDX60Q8IY21 1712 aaKnown RBP27.45■■□□□ 1.99
PTPN4-202ENST00000420482 CCDC191Q8NCU4 936 aa27.45■■□□□ 1.98
PTPN4-202ENST00000420482 MYD88Q99836 296 aa27.45■■□□□ 1.98
PTPN4-202ENST00000420482 ZNRF3Q9ULT6 936 aa27.45■■□□□ 1.98
PTPN4-202ENST00000420482 IL16Q14005 1332 aa27.44■■□□□ 1.98
PTPN4-202ENST00000420482 COL4A5P29400 1685 aa27.44■■□□□ 1.98
PTPN4-202ENST00000420482 RTL5Q5HYW3 569 aaPredicted RBP27.44■■□□□ 1.98
PTPN4-202ENST00000420482 MKRN1Q9UHC7 482 aaKnown RBP27.44■■□□□ 1.98
PTPN4-202ENST00000420482 CNTNAP1P78357 1384 aa27.44■■□□□ 1.98
PTPN4-202ENST00000420482 TSR2Q969E8 191 aaKnown RBP27.43■■□□□ 1.98
PTPN4-202ENST00000420482 KIAA2012Q0VF49 1180 aa27.42■■□□□ 1.98
PTPN4-202ENST00000420482 CWC25Q9NXE8 425 aaPredicted RBP27.42■■□□□ 1.98
PTPN4-202ENST00000420482 LTBP1Q14766 1721 aa27.41■■□□□ 1.98
PTPN4-202ENST00000420482 NEXNQ0ZGT2 675 aa27.41■■□□□ 1.98
PTPN4-202ENST00000420482 SLC51AQ86UW1 340 aa27.41■■□□□ 1.98
PTPN4-202ENST00000420482 TSPYL6Q8N831 410 aa27.41■■□□□ 1.98
PTPN4-202ENST00000420482 METTL22Q9BUU2 404 aaPredicted RBP27.41■■□□□ 1.98
PTPN4-202ENST00000420482 ITGBL1O95965 494 aaPredicted RBP27.4■■□□□ 1.98
PTPN4-202ENST00000420482 TWISTNBQ3B726 338 aaPredicted RBP27.4■■□□□ 1.98
PTPN4-202ENST00000420482 PCCAP05165 728 aaPredicted RBP27.39■■□□□ 1.98
PTPN4-202ENST00000420482 TNIP1Q15025 636 aa27.39■■□□□ 1.98
PTPN4-202ENST00000420482 USP50Q70EL3 339 aaPredicted RBP27.39■■□□□ 1.98
PTPN4-202ENST00000420482 NSFL1CQ9UNZ2 370 aaKnown RBP27.39■■□□□ 1.98
PTPN4-202ENST00000420482 SCNN1DP51172 638 aa27.38■■□□□ 1.97
PTPN4-202ENST00000420482 CCDC152Q4G0S7 254 aa27.38■■□□□ 1.97
PTPN4-202ENST00000420482 KSR2Q6VAB6 950 aa27.38■■□□□ 1.97
PTPN4-202ENST00000420482 CNTROBQ8N137 903 aa27.38■■□□□ 1.97
PTPN4-202ENST00000420482 CELF1Q92879 486 aaKnown RBP27.38■■□□□ 1.97
PTPN4-202ENST00000420482 MAP3K2Q9Y2U5 619 aa27.38■■□□□ 1.97
PTPN4-202ENST00000420482 LRRC37AA6NMS7 1700 aa27.38■■□□□ 1.97
PTPN4-202ENST00000420482 TMEM88BA6NKF7 163 aa27.37■■□□□ 1.97
PTPN4-202ENST00000420482 PDE8AO60658 829 aa27.37■■□□□ 1.97
PTPN4-202ENST00000420482 RPS8P62241 208 aaKnown RBP27.37■■□□□ 1.97
PTPN4-202ENST00000420482 CXCL9Q07325 125 aa27.37■■□□□ 1.97
PTPN4-202ENST00000420482 CIAPIN1Q6FI81 312 aa27.37■■□□□ 1.97
PTPN4-202ENST00000420482 WASHC4Q2M389 1173 aa27.36■■□□□ 1.97
PTPN4-202ENST00000420482 WDR63Q8IWG1 891 aa27.36■■□□□ 1.97
PTPN4-202ENST00000420482 EYA3Q99504 573 aa27.36■■□□□ 1.97
PTPN4-202ENST00000420482 CDHR2Q9BYE9 1310 aa27.36■■□□□ 1.97
PTPN4-202ENST00000420482 TRPM7Q96QT4 1865 aa27.36■■□□□ 1.97
PTPN4-202ENST00000420482 PI4KAP2A4QPH2 592 aa27.35■■□□□ 1.97
PTPN4-202ENST00000420482 C6orf229H3BNL8 230 aa27.35■■□□□ 1.97
PTPN4-202ENST00000420482 EPS15P42566 896 aa27.35■■□□□ 1.97
PTPN4-202ENST00000420482 MAP1SQ66K74 1059 aaPredicted RBP27.35■■□□□ 1.97
PTPN4-202ENST00000420482 PI4KAP1Q8N8J0 262 aa27.35■■□□□ 1.97
PTPN4-202ENST00000420482 ADARB2Q9NS39 739 aaKnown RBP27.35■■□□□ 1.97
PTPN4-202ENST00000420482 TAF1P21675 1872 aa27.35■■□□□ 1.97
PTPN4-202ENST00000420482 BCL2L13Q9BXK5 485 aa27.34■■□□□ 1.97
PTPN4-202ENST00000420482 GPRC5DQ9NZD1 345 aa27.34■■□□□ 1.97
PTPN4-202ENST00000420482 CAPN15O75808 1086 aa27.33■■□□□ 1.97
PTPN4-202ENST00000420482 SLC4A2P04920 1241 aa27.33■■□□□ 1.97
PTPN4-202ENST00000420482 RAD17O75943 681 aa27.31■■□□□ 1.96
PTPN4-202ENST00000420482 SALL2Q9Y467 1007 aaPredicted RBP27.31■■□□□ 1.96
PTPN4-202ENST00000420482 FANCIQ9NVI1 1328 aa27.31■■□□□ 1.96
PTPN4-202ENST00000420482 DUOX1Q9NRD9 1551 aa27.31■■□□□ 1.96
PTPN4-202ENST00000420482 VEGFBP49765 207 aa27.3■■□□□ 1.96
PTPN4-202ENST00000420482 GMPSP49915 693 aaPredicted RBP27.3■■□□□ 1.96
PTPN4-202ENST00000420482 GPSM2P81274 684 aa27.3■■□□□ 1.96
PTPN4-202ENST00000420482 ANKIB1Q9P2G1 1089 aa27.3■■□□□ 1.96
PTPN4-202ENST00000420482 FOXN1O15353 648 aa27.29■■□□□ 1.96
PTPN4-202ENST00000420482 ANKRD18AQ8IVF6 992 aa27.29■■□□□ 1.96
PTPN4-202ENST00000420482 ZC3H12CQ9C0D7 883 aaKnown RBP27.29■■□□□ 1.96
PTPN4-202ENST00000420482 THSD7BQ9C0I4 1608 aa27.29■■□□□ 1.96
PTPN4-202ENST00000420482 G3V3G9 751 aa27.28■■□□□ 1.96
PTPN4-202ENST00000420482 DCAF8Q5TAQ9 597 aa27.28■■□□□ 1.96
PTPN4-202ENST00000420482 FAM9BQ8IZU0 186 aa27.28■■□□□ 1.96
PTPN4-202ENST00000420482 CDC5LQ99459 802 aaKnown RBP27.28■■□□□ 1.96
PTPN4-202ENST00000420482 SEC31BQ9NQW1 1179 aa27.28■■□□□ 1.96
PTPN4-202ENST00000420482 PODXL2Q9NZ53 605 aa27.28■■□□□ 1.96
PTPN4-202ENST00000420482 RASSF10A6NK89 507 aa27.27■■□□□ 1.96
PTPN4-202ENST00000420482 H7C1D1 291 aa27.27■■□□□ 1.96
PTPN4-202ENST00000420482 RIMBP2O15034 1052 aa27.27■■□□□ 1.96
PTPN4-202ENST00000420482 IGKV5-2P06315 115 aa27.27■■□□□ 1.96
PTPN4-202ENST00000420482 FLIIQ13045 1269 aa27.27■■□□□ 1.96
PTPN4-202ENST00000420482 TBC1D16Q8TBP0 767 aa27.27■■□□□ 1.96
PTPN4-202ENST00000420482 MYH16Q9H6N6 1097 aa27.27■■□□□ 1.96
PTPN4-202ENST00000420482 POLLQ9UGP5 575 aa27.27■■□□□ 1.96
PTPN4-202ENST00000420482 CTSWP56202 376 aa27.26■■□□□ 1.95
PTPN4-202ENST00000420482 FKBP5Q13451 457 aaPredicted RBP27.26■■□□□ 1.95
PTPN4-202ENST00000420482 JARID2Q92833 1246 aaPredicted RBP27.26■■□□□ 1.95
PTPN4-202ENST00000420482 DBNDD1Q9H9R9 158 aa27.26■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms