RNA–Protein interactions for RNA: ENST00000420455.5

TMEM50B-201, Transcript of transmembrane protein 50B, humanhuman

TSL 1 (best)

Gene TMEM50B, Length 3,062 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-201ENST00000420455 SYNE4Q8N205 404 aa16.38■□□□□ 0.21
TMEM50B-201ENST00000420455 ZNF609O15014 1411 aa16.38■□□□□ 0.21
TMEM50B-201ENST00000420455 IRS4O14654 1257 aaPredicted RBP16.37■□□□□ 0.21
TMEM50B-201ENST00000420455 CHMLP26374 656 aa16.37■□□□□ 0.21
TMEM50B-201ENST00000420455 GPATCH3Q96I76 525 aa16.37■□□□□ 0.21
TMEM50B-201ENST00000420455 BCL2L12Q9HB09 334 aa16.37■□□□□ 0.21
TMEM50B-201ENST00000420455 TRMT112Q9UI30 125 aaKnown RBP16.37■□□□□ 0.21
TMEM50B-201ENST00000420455 ZNF652Q9Y2D9 606 aa16.37■□□□□ 0.21
TMEM50B-201ENST00000420455 EPB41L2O43491 1005 aaKnown RBP16.37■□□□□ 0.21
TMEM50B-201ENST00000420455 RTL5Q5HYW3 569 aaPredicted RBP16.37■□□□□ 0.21
TMEM50B-201ENST00000420455 CASC1Q6TDU7 716 aa16.37■□□□□ 0.21
TMEM50B-201ENST00000420455 NARFQ9UHQ1 456 aa16.37■□□□□ 0.21
TMEM50B-201ENST00000420455 ARAP2Q8WZ64 1704 aa16.37■□□□□ 0.21
TMEM50B-201ENST00000420455 UTP14AQ9BVJ6 771 aaKnown RBP16.36■□□□□ 0.21
TMEM50B-201ENST00000420455 USP26Q9BXU7 913 aa16.36■□□□□ 0.21
TMEM50B-201ENST00000420455 TLR7Q9NYK1 1049 aaKnown RBP16.36■□□□□ 0.21
TMEM50B-201ENST00000420455 SPEF2Q9C093 1822 aa16.36■□□□□ 0.21
TMEM50B-201ENST00000420455 SLC27A3Q5K4L6 730 aa16.36■□□□□ 0.21
TMEM50B-201ENST00000420455 SH3TC1Q8TE82 1336 aa16.35■□□□□ 0.21
TMEM50B-201ENST00000420455 RIC1Q4ADV7 1423 aa16.35■□□□□ 0.21
TMEM50B-201ENST00000420455 IL17RAQ96F46 866 aa16.35■□□□□ 0.21
TMEM50B-201ENST00000420455 DBNLQ9UJU6 430 aaKnown RBP16.35■□□□□ 0.21
TMEM50B-201ENST00000420455 KCNQ4P56696 695 aa16.35■□□□□ 0.21
TMEM50B-201ENST00000420455 CCDC57Q2TAC2 916 aa16.35■□□□□ 0.21
TMEM50B-201ENST00000420455 ANTXR1Q9H6X2 564 aa16.35■□□□□ 0.21
TMEM50B-201ENST00000420455 ATP5JP18859 108 aa16.34■□□□□ 0.21
TMEM50B-201ENST00000420455 LRRC24Q50LG9 513 aa16.34■□□□□ 0.21
TMEM50B-201ENST00000420455 ARXQ96QS3 562 aa16.34■□□□□ 0.21
TMEM50B-201ENST00000420455 ESYT1Q9BSJ8 1104 aa16.34■□□□□ 0.21
TMEM50B-201ENST00000420455 LRRC4BQ9NT99 713 aa16.34■□□□□ 0.21
TMEM50B-201ENST00000420455 CNTROBQ8N137 903 aa16.34■□□□□ 0.21
TMEM50B-201ENST00000420455 RIPOR2Q9Y4F9 1068 aa16.34■□□□□ 0.21
TMEM50B-201ENST00000420455 TNS1Q9HBL0 1735 aaKnown RBP16.34■□□□□ 0.21
TMEM50B-201ENST00000420455 ZNF594Q96JF6 807 aaPredicted RBP16.34■□□□□ 0.21
TMEM50B-201ENST00000420455 CCDC8Q9H0W5 538 aaPredicted RBP16.34■□□□□ 0.21
TMEM50B-201ENST00000420455 DAXXQ9UER7 740 aaPredicted RBP16.34■□□□□ 0.21
TMEM50B-201ENST00000420455 A0A1B0GUL6 1792 aa16.33■□□□□ 0.21
TMEM50B-201ENST00000420455 IFIT5Q13325 482 aaKnown RBP16.33■□□□□ 0.21
TMEM50B-201ENST00000420455 AMIGO3Q86WK7 504 aa16.33■□□□□ 0.21
TMEM50B-201ENST00000420455 TICAM2Q86XR7 235 aa16.33■□□□□ 0.21
TMEM50B-201ENST00000420455 GREM2Q9H772 168 aa16.33■□□□□ 0.21
TMEM50B-201ENST00000420455 NIP7Q9Y221 180 aaKnown RBP eCLIP16.33■□□□□ 0.21
TMEM50B-201ENST00000420455 RFX7Q2KHR2 1363 aa16.33■□□□□ 0.2
TMEM50B-201ENST00000420455 HSP90B1P14625 803 aaKnown RBP16.33■□□□□ 0.2
TMEM50B-201ENST00000420455 BECN1Q14457 450 aa16.33■□□□□ 0.2
TMEM50B-201ENST00000420455 EVI5LQ96CN4 794 aa16.33■□□□□ 0.2
TMEM50B-201ENST00000420455 PUS3Q9BZE2 481 aaKnown RBP16.33■□□□□ 0.2
TMEM50B-201ENST00000420455 SNRKQ9NRH2 765 aa16.33■□□□□ 0.2
TMEM50B-201ENST00000420455 ADRA2BP18089 450 aa16.32■□□□□ 0.2
TMEM50B-201ENST00000420455 ITGA6P23229 1130 aa16.32■□□□□ 0.2
TMEM50B-201ENST00000420455 SLC10A5Q5PT55 438 aa16.32■□□□□ 0.2
TMEM50B-201ENST00000420455 CHMP3Q9Y3E7 222 aa16.32■□□□□ 0.2
TMEM50B-201ENST00000420455 REC8O95072 547 aa16.32■□□□□ 0.2
TMEM50B-201ENST00000420455 VGLL2Q8N8G2 317 aa16.32■□□□□ 0.2
TMEM50B-201ENST00000420455 RTCBQ9Y3I0 505 aaKnown RBP16.32■□□□□ 0.2
TMEM50B-201ENST00000420455 TRIM6-TRIM34B2RNG4 842 aa16.32■□□□□ 0.2
TMEM50B-201ENST00000420455 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.32■□□□□ 0.2
TMEM50B-201ENST00000420455 ABCC12Q96J65 1359 aa16.31■□□□□ 0.2
TMEM50B-201ENST00000420455 GNPATO15228 680 aa16.31■□□□□ 0.2
TMEM50B-201ENST00000420455 RILPL2Q969X0 211 aa16.31■□□□□ 0.2
TMEM50B-201ENST00000420455 EP400Q96L91 3159 aa16.31■□□□□ 0.2
TMEM50B-201ENST00000420455 ANKRD18BA2A2Z9 1011 aa16.31■□□□□ 0.2
TMEM50B-201ENST00000420455 ARHGEF1Q92888 912 aaKnown RBP16.31■□□□□ 0.2
TMEM50B-201ENST00000420455 HMGB2P26583 209 aaKnown RBP16.3■□□□□ 0.2
TMEM50B-201ENST00000420455 TBC1D9BQ66K14 1250 aa16.3■□□□□ 0.2
TMEM50B-201ENST00000420455 SNX21Q969T3 373 aa16.3■□□□□ 0.2
TMEM50B-201ENST00000420455 COL4A1P02462 1669 aa16.3■□□□□ 0.2
TMEM50B-201ENST00000420455 CD2BP2O95400 341 aaKnown RBP16.3■□□□□ 0.2
TMEM50B-201ENST00000420455 DBNDD2Q9BQY9 259 aa16.3■□□□□ 0.2
TMEM50B-201ENST00000420455 RGS17Q9UGC6 210 aaPredicted RBP16.3■□□□□ 0.2
TMEM50B-201ENST00000420455 USPL1Q5W0Q7 1092 aa16.29■□□□□ 0.2
TMEM50B-201ENST00000420455 HAUS7Q99871 368 aa16.29■□□□□ 0.2
TMEM50B-201ENST00000420455 AKAP2Q9Y2D5 859 aa16.29■□□□□ 0.2
TMEM50B-201ENST00000420455 PLSCR1O15162 318 aa16.29■□□□□ 0.2
TMEM50B-201ENST00000420455 SGSM2O43147 1006 aa16.29■□□□□ 0.2
TMEM50B-201ENST00000420455 SF3B3Q15393 1217 aaKnown RBP16.29■□□□□ 0.2
TMEM50B-201ENST00000420455 PROM2Q8N271 834 aa16.28■□□□□ 0.2
TMEM50B-201ENST00000420455 IL25Q9H293 177 aa16.28■□□□□ 0.2
TMEM50B-201ENST00000420455 CEP126Q9P2H0 1117 aa16.28■□□□□ 0.2
TMEM50B-201ENST00000420455 TRIM37O94972 964 aa16.27■□□□□ 0.2
TMEM50B-201ENST00000420455 MAP4K4O95819 1239 aaPredicted RBP16.27■□□□□ 0.2
TMEM50B-201ENST00000420455 NFKBIBQ15653 356 aa16.27■□□□□ 0.2
TMEM50B-201ENST00000420455 A0A1B0GUL7 405 aa16.27■□□□□ 0.2
TMEM50B-201ENST00000420455 HCLS1P14317 486 aaPredicted RBP16.27■□□□□ 0.2
TMEM50B-201ENST00000420455 RXRBP28702 533 aa16.27■□□□□ 0.2
TMEM50B-201ENST00000420455 ZNF512BQ96KM6 892 aaPredicted RBP16.27■□□□□ 0.2
TMEM50B-201ENST00000420455 NYXQ9GZU5 481 aa16.27■□□□□ 0.2
TMEM50B-201ENST00000420455 SLKQ9H2G2 1235 aaPredicted RBP16.27■□□□□ 0.2
TMEM50B-201ENST00000420455 SRP68Q9UHB9 627 aaKnown RBP16.27■□□□□ 0.2
TMEM50B-201ENST00000420455 HIP1O00291 1037 aa16.27■□□□□ 0.19
TMEM50B-201ENST00000420455 CCDC152Q4G0S7 254 aa16.27■□□□□ 0.19
TMEM50B-201ENST00000420455 TRAPPC3LQ5T215 181 aa16.27■□□□□ 0.19
TMEM50B-201ENST00000420455 MROH5Q6ZUA9 1318 aa16.26■□□□□ 0.19
TMEM50B-201ENST00000420455 ZPR1O75312 459 aa16.26■□□□□ 0.19
TMEM50B-201ENST00000420455 SSFA2P28290 1259 aa16.26■□□□□ 0.19
TMEM50B-201ENST00000420455 SMIM5Q71RC9 77 aa16.26■□□□□ 0.19
TMEM50B-201ENST00000420455 AKAP11Q9UKA4 1901 aa16.26■□□□□ 0.19
TMEM50B-201ENST00000420455 FGFR2P21802 821 aa16.26■□□□□ 0.19
TMEM50B-201ENST00000420455 ERFEQ4G0M1 354 aa16.26■□□□□ 0.19
TMEM50B-201ENST00000420455 LDHAL6AQ6ZMR3 332 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms