RNA–Protein interactions for RNA: ENST00000419830.2

USP8-203, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 2

Gene USP8, Length 2,402 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-203ENST00000419830 ATP5JP18859 108 aa10.94□□□□□ -0.66
USP8-203ENST00000419830 RNF20Q5VTR2 975 aa10.94□□□□□ -0.66
USP8-203ENST00000419830 KCNF1Q9H3M0 494 aa10.94□□□□□ -0.66
USP8-203ENST00000419830 USP16Q9Y5T5 823 aa10.94□□□□□ -0.66
USP8-203ENST00000419830 NDUFB9Q9Y6M9 179 aa10.94□□□□□ -0.66
USP8-203ENST00000419830 NPHP3Q7Z494 1330 aa10.94□□□□□ -0.66
USP8-203ENST00000419830 PIP4K2AP48426 406 aaPredicted RBP10.94□□□□□ -0.66
USP8-203ENST00000419830 KRT85P78386 507 aa10.94□□□□□ -0.66
USP8-203ENST00000419830 TFCP2Q12800 502 aa10.94□□□□□ -0.66
USP8-203ENST00000419830 ANKRD1Q15327 319 aa10.94□□□□□ -0.66
USP8-203ENST00000419830 GLIPR1L2Q4G1C9 344 aa10.94□□□□□ -0.66
USP8-203ENST00000419830 KRT28Q7Z3Y7 464 aa10.94□□□□□ -0.66
USP8-203ENST00000419830 PIAS4Q8N2W9 510 aaPredicted RBP10.94□□□□□ -0.66
USP8-203ENST00000419830 TFIP11Q9UBB9 837 aaKnown RBP10.94□□□□□ -0.66
USP8-203ENST00000419830 CHMP3Q9Y3E7 222 aa10.94□□□□□ -0.66
USP8-203ENST00000419830 TRPM3Q9HCF6 1732 aaPredicted RBP10.94□□□□□ -0.66
USP8-203ENST00000419830 PDIA4P13667 645 aaKnown RBP10.93□□□□□ -0.66
USP8-203ENST00000419830 PDCP20941 246 aa10.93□□□□□ -0.66
USP8-203ENST00000419830 ZC3H6P61129 1189 aaKnown RBP10.93□□□□□ -0.66
USP8-203ENST00000419830 STK3Q13188 491 aa10.93□□□□□ -0.66
USP8-203ENST00000419830 CAMK4Q16566 473 aa10.93□□□□□ -0.66
USP8-203ENST00000419830 TNNI3KQ59H18 835 aa10.93□□□□□ -0.66
USP8-203ENST00000419830 ANKRD13DQ6ZTN6 518 aa10.93□□□□□ -0.66
USP8-203ENST00000419830 HMG20BQ9P0W2 317 aa10.93□□□□□ -0.66
USP8-203ENST00000419830 MRVI1Q9Y6F6 885 aa10.93□□□□□ -0.66
USP8-203ENST00000419830 FPGT-TNNI3KV9GXZ4 949 aa10.93□□□□□ -0.66
USP8-203ENST00000419830 JAK2O60674 1132 aa10.93□□□□□ -0.66
USP8-203ENST00000419830 CCDC192P0DO97 292 aa10.93□□□□□ -0.66
USP8-203ENST00000419830 PHKG2P15735 406 aa10.93□□□□□ -0.66
USP8-203ENST00000419830 NEXNQ0ZGT2 675 aa10.93□□□□□ -0.66
USP8-203ENST00000419830 RABL6Q3YEC7 729 aaPredicted RBP10.93□□□□□ -0.66
USP8-203ENST00000419830 SEC62Q99442 399 aaKnown RBP10.93□□□□□ -0.66
USP8-203ENST00000419830 SCN11AQ9UI33 1791 aa10.92□□□□□ -0.66
USP8-203ENST00000419830 CCDC129Q6ZRS4 1044 aa10.92□□□□□ -0.66
USP8-203ENST00000419830 VSIG10Q8N0Z9 540 aa10.92□□□□□ -0.66
USP8-203ENST00000419830 MYRIPQ8NFW9 859 aa10.92□□□□□ -0.66
USP8-203ENST00000419830 LEO1Q8WVC0 666 aaPredicted RBP10.92□□□□□ -0.66
USP8-203ENST00000419830 PGBD1Q96JS3 809 aa10.92□□□□□ -0.66
USP8-203ENST00000419830 DACT1Q9NYF0 836 aa10.92□□□□□ -0.66
USP8-203ENST00000419830 ZNF609O15014 1411 aa10.92□□□□□ -0.66
USP8-203ENST00000419830 CASP7P55210 303 aa10.92□□□□□ -0.66
USP8-203ENST00000419830 PLCB2Q00722 1185 aa10.92□□□□□ -0.66
USP8-203ENST00000419830 TYRO3Q06418 890 aa10.92□□□□□ -0.66
USP8-203ENST00000419830 RBM43Q6ZSC3 357 aaKnown RBP10.92□□□□□ -0.66
USP8-203ENST00000419830 KIAA1524Q8TCG1 905 aa10.92□□□□□ -0.66
USP8-203ENST00000419830 NUP62CLQ9H1M0 184 aa10.92□□□□□ -0.66
USP8-203ENST00000419830 PYCARDQ9ULZ3 195 aa10.92□□□□□ -0.66
USP8-203ENST00000419830 CYP21A2P08686 494 aa10.91□□□□□ -0.66
USP8-203ENST00000419830 MAP3K11Q16584 847 aa10.91□□□□□ -0.66
USP8-203ENST00000419830 RAPGEF4Q8WZA2 1011 aa10.91□□□□□ -0.66
USP8-203ENST00000419830 GTF3C6Q969F1 213 aa10.91□□□□□ -0.66
USP8-203ENST00000419830 DBNDD2Q9BQY9 259 aa10.91□□□□□ -0.66
USP8-203ENST00000419830 SCAND2PQ9GZW5 306 aaPredicted RBP10.91□□□□□ -0.66
USP8-203ENST00000419830 NLRP2Q9NX02 1062 aa10.91□□□□□ -0.66
USP8-203ENST00000419830 MST1RQ04912 1400 aa10.9□□□□□ -0.66
USP8-203ENST00000419830 RESTQ13127 1097 aa10.9□□□□□ -0.66
USP8-203ENST00000419830 UBE3BQ7Z3V4 1068 aa10.9□□□□□ -0.66
USP8-203ENST00000419830 LUZP1Q86V48 1076 aa10.9□□□□□ -0.66
USP8-203ENST00000419830 CKAP2LQ8IYA6 745 aa10.9□□□□□ -0.66
USP8-203ENST00000419830 FAM200AQ8TCP9 573 aa10.9□□□□□ -0.66
USP8-203ENST00000419830 TSC1Q92574 1164 aa10.9□□□□□ -0.66
USP8-203ENST00000419830 SPATA32Q96LK8 384 aa10.9□□□□□ -0.66
USP8-203ENST00000419830 NEK1Q96PY6 1258 aa10.9□□□□□ -0.66
USP8-203ENST00000419830 HAUS7Q99871 368 aa10.9□□□□□ -0.66
USP8-203ENST00000419830 MEGF6O75095 1541 aa10.9□□□□□ -0.66
USP8-203ENST00000419830 ATP5J2-PTCD1G3V325 749 aa10.9□□□□□ -0.66
USP8-203ENST00000419830 CYP27B1O15528 508 aa10.9□□□□□ -0.66
USP8-203ENST00000419830 PTCD1O75127 700 aaKnown RBP10.9□□□□□ -0.66
USP8-203ENST00000419830 SNRPA1P09661 255 aaKnown RBP10.9□□□□□ -0.66
USP8-203ENST00000419830 STOX1Q6ZVD7 989 aa10.9□□□□□ -0.66
USP8-203ENST00000419830 PRIMPOLQ96LW4 560 aa10.9□□□□□ -0.66
USP8-203ENST00000419830 MAP7D2Q96T17 732 aa10.9□□□□□ -0.66
USP8-203ENST00000419830 NR1I2O75469 434 aa10.89□□□□□ -0.67
USP8-203ENST00000419830 GTF2F1P35269 517 aaKnown RBP eCLIP10.89□□□□□ -0.67
USP8-203ENST00000419830 KRT32Q14532 448 aa10.89□□□□□ -0.67
USP8-203ENST00000419830 SLFNL1Q499Z3 407 aa10.89□□□□□ -0.67
USP8-203ENST00000419830 DNTTIP2Q5QJE6 756 aaKnown RBP10.89□□□□□ -0.67
USP8-203ENST00000419830 Q6ZUG5 572 aa10.89□□□□□ -0.67
USP8-203ENST00000419830 SPC24Q8NBT2 197 aa10.89□□□□□ -0.67
USP8-203ENST00000419830 DDX11Q96FC9 970 aa10.89□□□□□ -0.67
USP8-203ENST00000419830 CLSTN2Q9H4D0 955 aa10.89□□□□□ -0.67
USP8-203ENST00000419830 CBX8Q9HC52 389 aa10.89□□□□□ -0.67
USP8-203ENST00000419830 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.89□□□□□ -0.671e-7■■■□□ 17.5
USP8-203ENST00000419830 ZNF142P52746 1687 aaPredicted RBP10.89□□□□□ -0.67
USP8-203ENST00000419830 ADD1P35611 737 aaKnown RBP10.89□□□□□ -0.67
USP8-203ENST00000419830 HMGN5P82970 282 aaKnown RBP10.89□□□□□ -0.67
USP8-203ENST00000419830 MCMDC2Q4G0Z9 681 aa10.89□□□□□ -0.67
USP8-203ENST00000419830 BRF1Q92994 677 aa10.89□□□□□ -0.67
USP8-203ENST00000419830 DNAJC2Q99543 621 aaKnown RBP10.89□□□□□ -0.67
USP8-203ENST00000419830 TNMDQ9H2S6 317 aa10.89□□□□□ -0.67
USP8-203ENST00000419830 U3KPZ7 1027 aaPredicted RBP10.89□□□□□ -0.67
USP8-203ENST00000419830 C1orf167Q5SNV9 1468 aa10.88□□□□□ -0.67
USP8-203ENST00000419830 A0A087WZG4 1122 aa10.88□□□□□ -0.67
USP8-203ENST00000419830 FOXO4P98177 505 aa10.88□□□□□ -0.67
USP8-203ENST00000419830 SCRN1Q12765 414 aa10.88□□□□□ -0.67
USP8-203ENST00000419830 ANO6Q4KMQ2 910 aa10.88□□□□□ -0.67
USP8-203ENST00000419830 DDX46Q7L014 1031 aaKnown RBP10.88□□□□□ -0.67
USP8-203ENST00000419830 IFNL2Q8IZJ0 200 aa10.88□□□□□ -0.67
USP8-203ENST00000419830 ZNF710Q8N1W2 664 aa10.88□□□□□ -0.67
USP8-203ENST00000419830 LRRC2Q9BYS8 371 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms