RNA–Protein interactions for RNA: ENST00000419671.1

COL12A1-204, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 1,914 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-204ENST00000419671 CCDC8Q9H0W5 538 aaPredicted RBP9.92□□□□□ -0.82
COL12A1-204ENST00000419671 A0A0U1RQG5 324 aaPredicted RBP9.91□□□□□ -0.82
COL12A1-204ENST00000419671 INTS5Q6P9B9 1019 aaKnown RBP9.91□□□□□ -0.82
COL12A1-204ENST00000419671 HSCBQ8IWL3 235 aa9.91□□□□□ -0.82
COL12A1-204ENST00000419671 DDX60Q8IY21 1712 aaKnown RBP9.91□□□□□ -0.82
COL12A1-204ENST00000419671 DHX37Q8IY37 1157 aaKnown RBP9.91□□□□□ -0.82
COL12A1-204ENST00000419671 CNTROBQ8N137 903 aa9.91□□□□□ -0.82
COL12A1-204ENST00000419671 SLKQ9H2G2 1235 aaPredicted RBP9.91□□□□□ -0.82
COL12A1-204ENST00000419671 TAF1LQ8IZX4 1826 aa9.9□□□□□ -0.82
COL12A1-204ENST00000419671 LOC102724428A0A0B4J2F2 783 aa9.9□□□□□ -0.82
COL12A1-204ENST00000419671 A0A0G2JS52 829 aa9.9□□□□□ -0.82
COL12A1-204ENST00000419671 IL6STP40189 918 aaPredicted RBP9.9□□□□□ -0.82
COL12A1-204ENST00000419671 SIK1P57059 783 aa9.9□□□□□ -0.82
COL12A1-204ENST00000419671 TFCP2Q12800 502 aa9.9□□□□□ -0.82
COL12A1-204ENST00000419671 ITPK1Q13572 414 aa9.9□□□□□ -0.82
COL12A1-204ENST00000419671 CERKQ8TCT0 537 aa9.9□□□□□ -0.82
COL12A1-204ENST00000419671 LAMB2P55268 1798 aa9.9□□□□□ -0.82
COL12A1-204ENST00000419671 PALLDQ8WX93 1383 aa9.9□□□□□ -0.82
COL12A1-204ENST00000419671 PCCAP05165 728 aaPredicted RBP9.9□□□□□ -0.83
COL12A1-204ENST00000419671 ATP6V1AP38606 617 aa9.9□□□□□ -0.83
COL12A1-204ENST00000419671 EIF5P55010 431 aaKnown RBP9.9□□□□□ -0.83
COL12A1-204ENST00000419671 TNNI3KQ59H18 835 aa9.9□□□□□ -0.83
COL12A1-204ENST00000419671 ATG9AQ7Z3C6 839 aa9.9□□□□□ -0.83
COL12A1-204ENST00000419671 NLRP10Q86W26 655 aa9.9□□□□□ -0.83
COL12A1-204ENST00000419671 ZBTB38Q8NAP3 1195 aaPredicted RBP9.9□□□□□ -0.83
COL12A1-204ENST00000419671 FAM89AQ96GI7 184 aa9.9□□□□□ -0.83
COL12A1-204ENST00000419671 GPATCH3Q96I76 525 aa9.9□□□□□ -0.83
COL12A1-204ENST00000419671 DBNLQ9UJU6 430 aaKnown RBP9.9□□□□□ -0.83
COL12A1-204ENST00000419671 CHMP3Q9Y3E7 222 aa9.9□□□□□ -0.83
COL12A1-204ENST00000419671 FPGT-TNNI3KV9GXZ4 949 aa9.9□□□□□ -0.83
COL12A1-204ENST00000419671 LY75O60449 1722 aa9.89□□□□□ -0.83
COL12A1-204ENST00000419671 SPEF2Q9C093 1822 aa9.89□□□□□ -0.83
COL12A1-204ENST00000419671 CRKLP46109 303 aaKnown RBP9.89□□□□□ -0.83
COL12A1-204ENST00000419671 DZIP3Q86Y13 1208 aaKnown RBP9.89□□□□□ -0.83
COL12A1-204ENST00000419671 SYNE4Q8N205 404 aa9.89□□□□□ -0.83
COL12A1-204ENST00000419671 USP21Q9UK80 565 aa9.89□□□□□ -0.83
COL12A1-204ENST00000419671 TBC1D2BQ9UPU7 963 aa9.89□□□□□ -0.83
COL12A1-204ENST00000419671 ERVV-1B6SEH8 477 aa9.88□□□□□ -0.83
COL12A1-204ENST00000419671 SGSM2O43147 1006 aa9.88□□□□□ -0.83
COL12A1-204ENST00000419671 GPTP24298 496 aa9.88□□□□□ -0.83
COL12A1-204ENST00000419671 RBM10P98175 930 aaKnown RBP9.88□□□□□ -0.83
COL12A1-204ENST00000419671 RABEP1Q15276 862 aa9.88□□□□□ -0.83
COL12A1-204ENST00000419671 NFKBIBQ15653 356 aa9.88□□□□□ -0.83
COL12A1-204ENST00000419671 ZNF594Q96JF6 807 aaPredicted RBP9.88□□□□□ -0.83
COL12A1-204ENST00000419671 PLA2G12BQ9BX93 195 aa9.88□□□□□ -0.83
COL12A1-204ENST00000419671 ANO2Q9NQ90 1003 aa9.88□□□□□ -0.83
COL12A1-204ENST00000419671 CCDC87Q9NVE4 849 aa9.88□□□□□ -0.83
COL12A1-204ENST00000419671 UBN2Q6ZU65 1347 aa9.88□□□□□ -0.83
COL12A1-204ENST00000419671 GLIPR1L2Q4G1C9 344 aa9.88□□□□□ -0.83
COL12A1-204ENST00000419671 LRRC24Q50LG9 513 aa9.88□□□□□ -0.83
COL12A1-204ENST00000419671 HSP90AB3PQ58FF7 597 aa9.88□□□□□ -0.83
COL12A1-204ENST00000419671 PTF1AQ7RTS3 328 aa9.88□□□□□ -0.83
COL12A1-204ENST00000419671 EVI5LQ96CN4 794 aa9.88□□□□□ -0.83
COL12A1-204ENST00000419671 ZMYND15Q9H091 742 aa9.88□□□□□ -0.83
COL12A1-204ENST00000419671 CDHR2Q9BYE9 1310 aa9.87□□□□□ -0.83
COL12A1-204ENST00000419671 SCN7AQ01118 1682 aa9.87□□□□□ -0.83
COL12A1-204ENST00000419671 MYH7P12883 1935 aa9.87□□□□□ -0.83
COL12A1-204ENST00000419671 K7ELQ4 463 aaPredicted RBP9.87□□□□□ -0.83
COL12A1-204ENST00000419671 RIOK3O14730 519 aaKnown RBP9.87□□□□□ -0.83
COL12A1-204ENST00000419671 CSF1RP07333 972 aa9.87□□□□□ -0.83
COL12A1-204ENST00000419671 DDIT3P35638 169 aa9.87□□□□□ -0.83
COL12A1-204ENST00000419671 CWC27Q6UX04 472 aaKnown RBP9.87□□□□□ -0.83
COL12A1-204ENST00000419671 BOLA2Q9H3K6 86 aa9.87□□□□□ -0.83
COL12A1-204ENST00000419671 PALD1Q9ULE6 856 aa9.87□□□□□ -0.83
COL12A1-204ENST00000419671 ZNF609O15014 1411 aa9.87□□□□□ -0.83
COL12A1-204ENST00000419671 EYA2O00167 538 aa9.86□□□□□ -0.83
COL12A1-204ENST00000419671 EPB41L2O43491 1005 aaKnown RBP9.86□□□□□ -0.83
COL12A1-204ENST00000419671 CIAO1O76071 339 aa9.86□□□□□ -0.83
COL12A1-204ENST00000419671 HSPA1LP34931 641 aa9.86□□□□□ -0.83
COL12A1-204ENST00000419671 GSE1Q14687 1217 aa9.86□□□□□ -0.83
COL12A1-204ENST00000419671 ZNF34Q8IZ26 560 aa9.86□□□□□ -0.83
COL12A1-204ENST00000419671 SMARCC1Q92922 1105 aaPredicted RBP9.86□□□□□ -0.83
COL12A1-204ENST00000419671 IL17RAQ96F46 866 aa9.86□□□□□ -0.83
COL12A1-204ENST00000419671 DBNDD2Q9BQY9 259 aa9.86□□□□□ -0.83
COL12A1-204ENST00000419671 PUS3Q9BZE2 481 aaKnown RBP9.86□□□□□ -0.83
COL12A1-204ENST00000419671 BRWD3Q6RI45 1802 aa9.86□□□□□ -0.83
COL12A1-204ENST00000419671 MYO5AQ9Y4I1 1855 aaKnown RBP9.86□□□□□ -0.83
COL12A1-204ENST00000419671 LRP5O75197 1615 aa9.86□□□□□ -0.83
COL12A1-204ENST00000419671 AKAP11Q9UKA4 1901 aa9.86□□□□□ -0.83
COL12A1-204ENST00000419671 ATP5JP18859 108 aa9.86□□□□□ -0.83
COL12A1-204ENST00000419671 DEKP35659 375 aaKnown RBP9.86□□□□□ -0.83
COL12A1-204ENST00000419671 IL15P40933 162 aaPredicted RBP9.86□□□□□ -0.83
COL12A1-204ENST00000419671 NUBP1P53384 320 aa9.86□□□□□ -0.83
COL12A1-204ENST00000419671 CCDC85AQ96PX6 553 aaPredicted RBP9.86□□□□□ -0.83
COL12A1-204ENST00000419671 LSG1Q9H089 658 aaKnown RBP9.86□□□□□ -0.83
COL12A1-204ENST00000419671 RAD50Q92878 1312 aa9.85□□□□□ -0.83
COL12A1-204ENST00000419671 ARAP2Q8WZ64 1704 aa9.85□□□□□ -0.83
COL12A1-204ENST00000419671 STK25O00506 426 aa9.85□□□□□ -0.83
COL12A1-204ENST00000419671 CAMTA2O94983 1202 aa9.85□□□□□ -0.83
COL12A1-204ENST00000419671 HSPA4P34932 840 aa9.85□□□□□ -0.83
COL12A1-204ENST00000419671 ANAPC15P60006 121 aa9.85□□□□□ -0.83
COL12A1-204ENST00000419671 CCDC57Q2TAC2 916 aa9.85□□□□□ -0.83
COL12A1-204ENST00000419671 TTLL11Q8NHH1 800 aa9.85□□□□□ -0.83
COL12A1-204ENST00000419671 EDC3Q96F86 508 aaKnown RBP9.85□□□□□ -0.83
COL12A1-204ENST00000419671 GPR108Q9NPR9 543 aa9.85□□□□□ -0.83
COL12A1-204ENST00000419671 DIAPH3Q9NSV4 1193 aa9.85□□□□□ -0.83
COL12A1-204ENST00000419671 A0A1B0GUL6 1792 aa9.85□□□□□ -0.83
COL12A1-204ENST00000419671 TAF1P21675 1872 aa9.85□□□□□ -0.83
COL12A1-204ENST00000419671 C4AP0C0L4 1744 aa9.84□□□□□ -0.83
COL12A1-204ENST00000419671 C4BP0C0L5 1744 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms