RNA–Protein interactions for RNA: ENST00000419636.1

NPRL3-202, Transcript of NPR3 like, GATOR1 complex subunit, humanhuman

TSL 5

Gene NPRL3, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPRL3-202ENST00000419636 CCDC93Q567U6 631 aa20.34■□□□□ 0.85
NPRL3-202ENST00000419636 GRAPLQ8TC17 118 aaPredicted RBP20.34■□□□□ 0.85
NPRL3-202ENST00000419636 FRAT1Q92837 279 aaPredicted RBP20.34■□□□□ 0.85
NPRL3-202ENST00000419636 PLA2G12BQ9BX93 195 aa20.34■□□□□ 0.85
NPRL3-202ENST00000419636 TMX4Q9H1E5 349 aaPredicted RBP20.34■□□□□ 0.85
NPRL3-202ENST00000419636 SBF1O95248 1867 aa20.34■□□□□ 0.85
NPRL3-202ENST00000419636 CCDC88AQ3V6T2 1871 aa20.34■□□□□ 0.85
NPRL3-202ENST00000419636 BBOX1O75936 387 aa20.33■□□□□ 0.85
NPRL3-202ENST00000419636 CTSWP56202 376 aa20.33■□□□□ 0.85
NPRL3-202ENST00000419636 CC2D2BQ6DHV5 1058 aa20.33■□□□□ 0.85
NPRL3-202ENST00000419636 C7orf43Q8WVR3 580 aa20.33■□□□□ 0.85
NPRL3-202ENST00000419636 GOLGB1Q14789 3259 aaKnown RBP20.33■□□□□ 0.85
NPRL3-202ENST00000419636 TMC4Q7Z404 712 aa20.32■□□□□ 0.84
NPRL3-202ENST00000419636 RTKN2Q8IZC4 609 aa20.32■□□□□ 0.84
NPRL3-202ENST00000419636 GRIPAP1Q4V328 841 aa20.31■□□□□ 0.84
NPRL3-202ENST00000419636 ZKSCAN2Q63HK3 967 aa20.31■□□□□ 0.84
NPRL3-202ENST00000419636 ATF7IPQ6VMQ6 1270 aa20.31■□□□□ 0.84
NPRL3-202ENST00000419636 YY1P25490 414 aa20.3■□□□□ 0.84
NPRL3-202ENST00000419636 TTLL11Q8NHH1 800 aa20.3■□□□□ 0.84
NPRL3-202ENST00000419636 TAOK3Q9H2K8 898 aa20.3■□□□□ 0.84
NPRL3-202ENST00000419636 CCDC85AQ96PX6 553 aaPredicted RBP20.29■□□□□ 0.84
NPRL3-202ENST00000419636 ATP6V0A2Q9Y487 856 aa20.29■□□□□ 0.84
NPRL3-202ENST00000419636 RTL9Q8NET4 1388 aa20.29■□□□□ 0.84
NPRL3-202ENST00000419636 DICER1Q9UPY3 1922 aaKnown RBP20.29■□□□□ 0.84
NPRL3-202ENST00000419636 UTYO14607 1347 aa20.28■□□□□ 0.84
NPRL3-202ENST00000419636 LTBP3Q9NS15 1303 aa20.28■□□□□ 0.84
NPRL3-202ENST00000419636 NFKBIEO00221 500 aa20.28■□□□□ 0.84
NPRL3-202ENST00000419636 TRIM27P14373 513 aa20.28■□□□□ 0.84
NPRL3-202ENST00000419636 RPS8P62241 208 aaKnown RBP20.28■□□□□ 0.84
NPRL3-202ENST00000419636 RASSF7Q02833 373 aa20.28■□□□□ 0.84
NPRL3-202ENST00000419636 SP8Q8IXZ3 490 aa20.28■□□□□ 0.84
NPRL3-202ENST00000419636 CELF1Q92879 486 aaKnown RBP20.28■□□□□ 0.84
NPRL3-202ENST00000419636 CDC5LQ99459 802 aaKnown RBP20.28■□□□□ 0.84
NPRL3-202ENST00000419636 RCAN3Q9UKA8 241 aa20.28■□□□□ 0.84
NPRL3-202ENST00000419636 NBPF7P0C2Y1 421 aaPredicted RBP20.27■□□□□ 0.84
NPRL3-202ENST00000419636 LMNB1P20700 586 aa20.27■□□□□ 0.84
NPRL3-202ENST00000419636 INTS3Q68E01 1043 aaKnown RBP20.27■□□□□ 0.84
NPRL3-202ENST00000419636 OLFM4Q6UX06 510 aa20.27■□□□□ 0.84
NPRL3-202ENST00000419636 GREM2Q9H772 168 aa20.27■□□□□ 0.84
NPRL3-202ENST00000419636 SEC31BQ9NQW1 1179 aa20.27■□□□□ 0.84
NPRL3-202ENST00000419636 SPEF2Q9C093 1822 aa20.27■□□□□ 0.84
NPRL3-202ENST00000419636 LRRC37AA6NMS7 1700 aa20.27■□□□□ 0.83
NPRL3-202ENST00000419636 CSF1RP07333 972 aa20.26■□□□□ 0.83
NPRL3-202ENST00000419636 FKBP4Q02790 459 aaKnown RBP eCLIP20.26■□□□□ 0.83
NPRL3-202ENST00000419636 C9orf131Q5VYM1 1079 aa20.26■□□□□ 0.83
NPRL3-202ENST00000419636 ANKRD18AQ8IVF6 992 aa20.26■□□□□ 0.83
NPRL3-202ENST00000419636 USP44Q9H0E7 712 aa20.26■□□□□ 0.83
NPRL3-202ENST00000419636 UTRNP46939 3433 aa20.25■□□□□ 0.83
NPRL3-202ENST00000419636 FOXO4P98177 505 aa20.25■□□□□ 0.83
NPRL3-202ENST00000419636 FTSJ3Q8IY81 847 aaKnown RBP20.25■□□□□ 0.83
NPRL3-202ENST00000419636 CLUAP1Q96AJ1 413 aa20.25■□□□□ 0.83
NPRL3-202ENST00000419636 PSMD1Q99460 953 aa20.25■□□□□ 0.83
NPRL3-202ENST00000419636 RNF181Q9P0P0 153 aa20.25■□□□□ 0.83
NPRL3-202ENST00000419636 HDAC5Q9UQL6 1122 aa20.25■□□□□ 0.83
NPRL3-202ENST00000419636 CHMP3Q9Y3E7 222 aa20.25■□□□□ 0.83
NPRL3-202ENST00000419636 ITGA6P23229 1130 aa20.24■□□□□ 0.83
NPRL3-202ENST00000419636 FAM161AQ3B820 660 aa20.24■□□□□ 0.83
NPRL3-202ENST00000419636 SUCLG2Q96I99 432 aa20.24■□□□□ 0.83
NPRL3-202ENST00000419636 SNED1Q8TER0 1413 aa20.24■□□□□ 0.83
NPRL3-202ENST00000419636 ANKRD18BA2A2Z9 1011 aa20.23■□□□□ 0.83
NPRL3-202ENST00000419636 UBTFL1P0CB47 393 aaPredicted RBP20.23■□□□□ 0.83
NPRL3-202ENST00000419636 MS4A1P11836 297 aa20.23■□□□□ 0.83
NPRL3-202ENST00000419636 LMBR1LQ6UX01 489 aa20.23■□□□□ 0.83
NPRL3-202ENST00000419636 MPNDQ8N594 471 aa20.23■□□□□ 0.83
NPRL3-202ENST00000419636 COL4A1P02462 1669 aa20.22■□□□□ 0.83
NPRL3-202ENST00000419636 TIAM2Q8IVF5 1701 aa20.22■□□□□ 0.83
NPRL3-202ENST00000419636 IGHMBP2P38935 993 aaKnown RBP20.22■□□□□ 0.83
NPRL3-202ENST00000419636 IFIT5Q13325 482 aaKnown RBP20.22■□□□□ 0.83
NPRL3-202ENST00000419636 EPHA10Q5JZY3 1008 aa20.22■□□□□ 0.83
NPRL3-202ENST00000419636 DPP8Q6V1X1 898 aaPredicted RBP20.22■□□□□ 0.83
NPRL3-202ENST00000419636 DZIP1LQ8IYY4 767 aaKnown RBP20.22■□□□□ 0.83
NPRL3-202ENST00000419636 SUPT20HQ8NEM7 779 aa20.22■□□□□ 0.83
NPRL3-202ENST00000419636 TNNQ9UQP3 1299 aa20.22■□□□□ 0.83
NPRL3-202ENST00000419636 CCDC57Q2TAC2 916 aa20.21■□□□□ 0.83
NPRL3-202ENST00000419636 ZC3H4Q9UPT8 1303 aaKnown RBP20.21■□□□□ 0.83
NPRL3-202ENST00000419636 GNAI3P08754 354 aa20.2■□□□□ 0.82
NPRL3-202ENST00000419636 PRELPP51888 382 aa20.2■□□□□ 0.82
NPRL3-202ENST00000419636 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.2■□□□□ 0.82
NPRL3-202ENST00000419636 KAZALD1Q96I82 304 aa20.2■□□□□ 0.82
NPRL3-202ENST00000419636 MPHOSPH8Q99549 860 aa20.2■□□□□ 0.82
NPRL3-202ENST00000419636 BICC1Q9H694 974 aaKnown RBP20.2■□□□□ 0.82
NPRL3-202ENST00000419636 ZNF277Q9NRM2 450 aaPredicted RBP20.2■□□□□ 0.82
NPRL3-202ENST00000419636 BSDC1Q9NW68 430 aaPredicted RBP20.2■□□□□ 0.82
NPRL3-202ENST00000419636 IARSP41252 1262 aaKnown RBP20.19■□□□□ 0.82
NPRL3-202ENST00000419636 RABL6Q3YEC7 729 aaPredicted RBP20.19■□□□□ 0.82
NPRL3-202ENST00000419636 TAF7LQ5H9L4 462 aa20.19■□□□□ 0.82
NPRL3-202ENST00000419636 SLC51AQ86UW1 340 aa20.19■□□□□ 0.82
NPRL3-202ENST00000419636 TMEM57Q8N5G2 664 aa20.19■□□□□ 0.82
NPRL3-202ENST00000419636 RTFDC1Q9BY42 306 aaPredicted RBP20.19■□□□□ 0.82
NPRL3-202ENST00000419636 NSFL1CQ9UNZ2 370 aaKnown RBP20.19■□□□□ 0.82
NPRL3-202ENST00000419636 MEIS3Q99687 375 aa20.18■□□□□ 0.82
NPRL3-202ENST00000419636 VPS33BQ9H267 617 aa20.18■□□□□ 0.82
NPRL3-202ENST00000419636 LTBP1Q14766 1721 aa20.17■□□□□ 0.82
NPRL3-202ENST00000419636 GPSM2P81274 684 aa20.17■□□□□ 0.82
NPRL3-202ENST00000419636 ITPRIPQ8IWB1 547 aa20.17■□□□□ 0.82
NPRL3-202ENST00000419636 ANKRD44Q8N8A2 993 aa20.17■□□□□ 0.82
NPRL3-202ENST00000419636 ANKIB1Q9P2G1 1089 aa20.17■□□□□ 0.82
NPRL3-202ENST00000419636 JDP2Q8WYK2 163 aa20.16■□□□□ 0.82
NPRL3-202ENST00000419636 PODXL2Q9NZ53 605 aa20.16■□□□□ 0.82
NPRL3-202ENST00000419636 LRRFIP2Q9Y608 721 aaKnown RBP20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms