RNA–Protein interactions for RNA: ENST00000419601.1

NOD1-204, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 1 (best)

Gene NOD1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-204ENST00000419601 TMC4Q7Z404 712 aa20.38■□□□□ 0.85
NOD1-204ENST00000419601 SP8Q8IXZ3 490 aa20.38■□□□□ 0.85
NOD1-204ENST00000419601 JDP2Q8WYK2 163 aa20.38■□□□□ 0.85
NOD1-204ENST00000419601 DDNO94850 711 aaPredicted RBP20.37■□□□□ 0.85
NOD1-204ENST00000419601 FSTL1Q12841 308 aa20.37■□□□□ 0.85
NOD1-204ENST00000419601 FLIIQ13045 1269 aa20.37■□□□□ 0.85
NOD1-204ENST00000419601 SLC51AQ86UW1 340 aa20.37■□□□□ 0.85
NOD1-204ENST00000419601 DNAJC5GQ8N7S2 189 aa20.37■□□□□ 0.85
NOD1-204ENST00000419601 POTECB2RU33 542 aa20.36■□□□□ 0.85
NOD1-204ENST00000419601 CCER2I3L3R5 266 aa20.36■□□□□ 0.85
NOD1-204ENST00000419601 FZD9O00144 591 aa20.36■□□□□ 0.85
NOD1-204ENST00000419601 SUPT20HQ8NEM7 779 aa20.36■□□□□ 0.85
NOD1-204ENST00000419601 TAF1P21675 1872 aa20.36■□□□□ 0.85
NOD1-204ENST00000419601 IGKV5-2P06315 115 aa20.35■□□□□ 0.85
NOD1-204ENST00000419601 LARGE2Q8N3Y3 721 aa20.35■□□□□ 0.85
NOD1-204ENST00000419601 VPS33BQ9H267 617 aa20.35■□□□□ 0.85
NOD1-204ENST00000419601 ZNF541Q9H0D2 1346 aa20.34■□□□□ 0.85
NOD1-204ENST00000419601 FKBP5Q13451 457 aaPredicted RBP20.34■□□□□ 0.85
NOD1-204ENST00000419601 DPP8Q6V1X1 898 aaPredicted RBP20.34■□□□□ 0.85
NOD1-204ENST00000419601 MPNDQ8N594 471 aa20.34■□□□□ 0.85
NOD1-204ENST00000419601 SMC1BQ8NDV3 1235 aa20.34■□□□□ 0.85
NOD1-204ENST00000419601 L3MBTL3Q96JM7 780 aaPredicted RBP20.34■□□□□ 0.85
NOD1-204ENST00000419601 RTFDC1Q9BY42 306 aaPredicted RBP20.34■□□□□ 0.85
NOD1-204ENST00000419601 LRRC37AA6NMS7 1700 aa20.33■□□□□ 0.85
NOD1-204ENST00000419601 CDHR2Q9BYE9 1310 aa20.33■□□□□ 0.85
NOD1-204ENST00000419601 IQCA1LA6NCM1 817 aa20.33■□□□□ 0.85
NOD1-204ENST00000419601 PDE8AO60658 829 aa20.33■□□□□ 0.85
NOD1-204ENST00000419601 COL4A5P29400 1685 aa20.32■□□□□ 0.84
NOD1-204ENST00000419601 SCN4AP35499 1836 aa20.32■□□□□ 0.84
NOD1-204ENST00000419601 NEURL1BA8MQ27 555 aa20.32■□□□□ 0.84
NOD1-204ENST00000419601 PPIP5K2O43314 1243 aa20.32■□□□□ 0.84
NOD1-204ENST00000419601 CWF19L2Q2TBE0 894 aaKnown RBP20.32■□□□□ 0.84
NOD1-204ENST00000419601 CELF1Q92879 486 aaKnown RBP20.32■□□□□ 0.84
NOD1-204ENST00000419601 EIF6P56537 245 aaKnown RBP20.31■□□□□ 0.84
NOD1-204ENST00000419601 HTRA3P83110 453 aa20.31■□□□□ 0.84
NOD1-204ENST00000419601 CCDC152Q4G0S7 254 aa20.31■□□□□ 0.84
NOD1-204ENST00000419601 NIM1KQ8IY84 436 aa20.31■□□□□ 0.84
NOD1-204ENST00000419601 GPC2Q8N158 579 aa20.31■□□□□ 0.84
NOD1-204ENST00000419601 DNAAF4Q8WXU2 420 aa20.31■□□□□ 0.84
NOD1-204ENST00000419601 JARID2Q92833 1246 aaPredicted RBP20.31■□□□□ 0.84
NOD1-204ENST00000419601 RPS8P62241 208 aaKnown RBP20.3■□□□□ 0.84
NOD1-204ENST00000419601 AOC3Q16853 763 aa20.3■□□□□ 0.84
NOD1-204ENST00000419601 E9PSI1 815 aa20.29■□□□□ 0.84
NOD1-204ENST00000419601 LINS1Q8NG48 757 aa20.29■□□□□ 0.84
NOD1-204ENST00000419601 COL4A1P02462 1669 aa20.29■□□□□ 0.84
NOD1-204ENST00000419601 KIAA2012Q0VF49 1180 aa20.28■□□□□ 0.84
NOD1-204ENST00000419601 GCKRQ14397 625 aa20.28■□□□□ 0.84
NOD1-204ENST00000419601 KLRG1Q96E93 195 aa20.28■□□□□ 0.84
NOD1-204ENST00000419601 SEC31BQ9NQW1 1179 aa20.28■□□□□ 0.84
NOD1-204ENST00000419601 HACL1Q9UJ83 578 aa20.28■□□□□ 0.84
NOD1-204ENST00000419601 DUOX1Q9NRD9 1551 aa20.27■□□□□ 0.84
NOD1-204ENST00000419601 H7C1W4 665 aa20.27■□□□□ 0.84
NOD1-204ENST00000419601 CTSWP56202 376 aa20.27■□□□□ 0.84
NOD1-204ENST00000419601 UBE3BQ7Z3V4 1068 aa20.27■□□□□ 0.84
NOD1-204ENST00000419601 TAF1DQ9H5J8 278 aaPredicted RBP20.27■□□□□ 0.84
NOD1-204ENST00000419601 NSFL1CQ9UNZ2 370 aaKnown RBP20.27■□□□□ 0.84
NOD1-204ENST00000419601 GJA3Q9Y6H8 435 aa20.27■□□□□ 0.84
NOD1-204ENST00000419601 MYH3P11055 1940 aa20.27■□□□□ 0.84
NOD1-204ENST00000419601 ZNRF3Q9ULT6 936 aa20.26■□□□□ 0.83
NOD1-204ENST00000419601 SLFN5Q08AF3 891 aa20.25■□□□□ 0.83
NOD1-204ENST00000419601 CHADLQ6NUI6 762 aa20.25■□□□□ 0.83
NOD1-204ENST00000419601 TTLL11Q8NHH1 800 aa20.25■□□□□ 0.83
NOD1-204ENST00000419601 CCDC85AQ96PX6 553 aaPredicted RBP20.25■□□□□ 0.83
NOD1-204ENST00000419601 LTBP1Q14766 1721 aa20.24■□□□□ 0.83
NOD1-204ENST00000419601 GPSM2P81274 684 aa20.24■□□□□ 0.83
NOD1-204ENST00000419601 ANKRD18AQ8IVF6 992 aa20.24■□□□□ 0.83
NOD1-204ENST00000419601 CDC5LQ99459 802 aaKnown RBP20.24■□□□□ 0.83
NOD1-204ENST00000419601 RTL9Q8NET4 1388 aa20.23■□□□□ 0.83
NOD1-204ENST00000419601 PCNTO95613 3336 aa20.23■□□□□ 0.83
NOD1-204ENST00000419601 F6X3S4 739 aa20.23■□□□□ 0.83
NOD1-204ENST00000419601 C6orf229H3BNL8 230 aa20.23■□□□□ 0.83
NOD1-204ENST00000419601 POTEIP0CG38 1075 aa20.23■□□□□ 0.83
NOD1-204ENST00000419601 POTEJP0CG39 1038 aa20.23■□□□□ 0.83
NOD1-204ENST00000419601 LMOD1P29536 600 aaPredicted RBP20.23■□□□□ 0.83
NOD1-204ENST00000419601 EPHX2P34913 555 aa20.23■□□□□ 0.83
NOD1-204ENST00000419601 WASHC4Q2M389 1173 aa20.23■□□□□ 0.83
NOD1-204ENST00000419601 BEND3Q5T5X7 828 aa20.23■□□□□ 0.83
NOD1-204ENST00000419601 COL13A1Q5TAT6 717 aaPredicted RBP20.23■□□□□ 0.83
NOD1-204ENST00000419601 PNMA8AQ86V59 439 aaPredicted RBP20.23■□□□□ 0.83
NOD1-204ENST00000419601 LDHDQ86WU2 507 aa20.23■□□□□ 0.83
NOD1-204ENST00000419601 JMYQ8N9B5 988 aa20.23■□□□□ 0.83
NOD1-204ENST00000419601 PLA2G12BQ9BX93 195 aa20.23■□□□□ 0.83
NOD1-204ENST00000419601 PODXL2Q9NZ53 605 aa20.23■□□□□ 0.83
NOD1-204ENST00000419601 CASP7P55210 303 aa20.22■□□□□ 0.83
NOD1-204ENST00000419601 CXCL9Q07325 125 aa20.22■□□□□ 0.83
NOD1-204ENST00000419601 EYA3Q99504 573 aa20.22■□□□□ 0.83
NOD1-204ENST00000419601 GREM2Q9H772 168 aa20.22■□□□□ 0.83
NOD1-204ENST00000419601 POLLQ9UGP5 575 aa20.22■□□□□ 0.83
NOD1-204ENST00000419601 SCNN1DP51172 638 aa20.21■□□□□ 0.83
NOD1-204ENST00000419601 EAPPQ56P03 285 aaPredicted RBP20.21■□□□□ 0.83
NOD1-204ENST00000419601 TBC1D16Q8TBP0 767 aa20.21■□□□□ 0.83
NOD1-204ENST00000419601 ANKIB1Q9P2G1 1089 aa20.21■□□□□ 0.83
NOD1-204ENST00000419601 TNIP1Q15025 636 aa20.2■□□□□ 0.82
NOD1-204ENST00000419601 DIEXFQ68CQ4 756 aaKnown RBP20.2■□□□□ 0.82
NOD1-204ENST00000419601 CIAPIN1Q6FI81 312 aa20.2■□□□□ 0.82
NOD1-204ENST00000419601 CDCA7LQ96GN5 454 aa20.2■□□□□ 0.82
NOD1-204ENST00000419601 ADAMTSL1Q8N6G6 1762 aa20.19■□□□□ 0.82
NOD1-204ENST00000419601 CAPN15O75808 1086 aa20.19■□□□□ 0.82
NOD1-204ENST00000419601 GGA1Q9UJY5 639 aa20.19■□□□□ 0.82
NOD1-204ENST00000419601 RIMBP2O15034 1052 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms