RNA–Protein interactions for RNA: ENST00000419459.1

LINC00642-201, long intergenic non-protein coding RNA 642, humanhuman

TSL 2 BASIC

Gene LINC00642, Length 2,026 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-201ENST00000419459 PSDA5PKW4 1024 aaPredicted RBP15.83■□□□□ 0.12
LINC00642-201ENST00000419459 IRS4O14654 1257 aaPredicted RBP15.83■□□□□ 0.12
LINC00642-201ENST00000419459 NPHP1O15259 732 aa15.83■□□□□ 0.12
LINC00642-201ENST00000419459 ERFEQ4G0M1 354 aa15.83■□□□□ 0.12
LINC00642-201ENST00000419459 PPP1R42Q7Z4L9 355 aa15.83■□□□□ 0.12
LINC00642-201ENST00000419459 CHMP3Q9Y3E7 222 aa15.83■□□□□ 0.12
LINC00642-201ENST00000419459 CARMIL3Q8ND23 1372 aa15.83■□□□□ 0.12
LINC00642-201ENST00000419459 ABCC12Q96J65 1359 aa15.83■□□□□ 0.12
LINC00642-201ENST00000419459 SH3TC1Q8TE82 1336 aa15.83■□□□□ 0.12
LINC00642-201ENST00000419459 SRGAP3O43295 1099 aa15.82■□□□□ 0.12
LINC00642-201ENST00000419459 ANKRD44Q8N8A2 993 aa15.82■□□□□ 0.12
LINC00642-201ENST00000419459 KLHDC4Q8TBB5 520 aa15.82■□□□□ 0.12
LINC00642-201ENST00000419459 GTF2E1P29083 439 aaPredicted RBP15.82■□□□□ 0.12
LINC00642-201ENST00000419459 FOXO4P98177 505 aa15.82■□□□□ 0.12
LINC00642-201ENST00000419459 LMBR1LQ6UX01 489 aa15.82■□□□□ 0.12
LINC00642-201ENST00000419459 TAF1P21675 1872 aa15.82■□□□□ 0.12
LINC00642-201ENST00000419459 IBTKQ9P2D0 1353 aaPredicted RBP15.81■□□□□ 0.12
LINC00642-201ENST00000419459 MMP10P09238 476 aa15.81■□□□□ 0.12
LINC00642-201ENST00000419459 TM4SF1P30408 202 aa15.81■□□□□ 0.12
LINC00642-201ENST00000419459 TNRC6CQ9HCJ0 1690 aaKnown RBP15.81■□□□□ 0.12
LINC00642-201ENST00000419459 C3orf67Q6ZVT6 689 aa15.8■□□□□ 0.12
LINC00642-201ENST00000419459 SLKQ9H2G2 1235 aaPredicted RBP15.8■□□□□ 0.12
LINC00642-201ENST00000419459 LAMB2P55268 1798 aa15.8■□□□□ 0.12
LINC00642-201ENST00000419459 APBB1O00213 710 aa15.8■□□□□ 0.12
LINC00642-201ENST00000419459 POLRMTO00411 1230 aaKnown RBP15.8■□□□□ 0.12
LINC00642-201ENST00000419459 RGL2O15211 777 aa15.8■□□□□ 0.12
LINC00642-201ENST00000419459 ZBTB7AO95365 584 aa15.8■□□□□ 0.12
LINC00642-201ENST00000419459 SEC24BO95487 1268 aa15.8■□□□□ 0.12
LINC00642-201ENST00000419459 SERPINB2P05120 415 aa15.8■□□□□ 0.12
LINC00642-201ENST00000419459 RPAP2Q8IXW5 612 aaPredicted RBP15.8■□□□□ 0.12
LINC00642-201ENST00000419459 NLGN1Q8N2Q7 840 aa15.8■□□□□ 0.12
LINC00642-201ENST00000419459 CNBD1Q8NA66 436 aa15.8■□□□□ 0.12
LINC00642-201ENST00000419459 PA2G4Q9UQ80 394 aaKnown RBP15.8■□□□□ 0.12
LINC00642-201ENST00000419459 CDHR2Q9BYE9 1310 aa15.79■□□□□ 0.12
LINC00642-201ENST00000419459 XRCC6P12956 609 aaKnown RBP eCLIP15.78■□□□□ 0.12
LINC00642-201ENST00000419459 ATP8B2P98198 1209 aa15.78■□□□□ 0.12
LINC00642-201ENST00000419459 HDAC1Q13547 482 aaPredicted RBP15.78■□□□□ 0.12
LINC00642-201ENST00000419459 PRR5LQ6MZQ0 368 aa15.78■□□□□ 0.12
LINC00642-201ENST00000419459 TPTE2Q6XPS3 522 aa15.78■□□□□ 0.12
LINC00642-201ENST00000419459 TBC1D2Q9BYX2 928 aa15.78■□□□□ 0.12
LINC00642-201ENST00000419459 EXOC6BQ9Y2D4 811 aa15.78■□□□□ 0.12
LINC00642-201ENST00000419459 MCM4P33991 863 aa15.78■□□□□ 0.12
LINC00642-201ENST00000419459 MRE11P49959 708 aa15.78■□□□□ 0.12
LINC00642-201ENST00000419459 CTSWP56202 376 aa15.78■□□□□ 0.12
LINC00642-201ENST00000419459 RABL6Q3YEC7 729 aaPredicted RBP15.78■□□□□ 0.12
LINC00642-201ENST00000419459 SIL1Q9H173 461 aa15.78■□□□□ 0.12
LINC00642-201ENST00000419459 RWDD1Q9H446 243 aaPredicted RBP15.78■□□□□ 0.12
LINC00642-201ENST00000419459 GREM2Q9H772 168 aa15.78■□□□□ 0.12
LINC00642-201ENST00000419459 COL4A1P02462 1669 aa15.78■□□□□ 0.12
LINC00642-201ENST00000419459 RRP9O43818 475 aaKnown RBP15.77■□□□□ 0.12
LINC00642-201ENST00000419459 PDE8AO60658 829 aa15.77■□□□□ 0.12
LINC00642-201ENST00000419459 TTLL11Q8NHH1 800 aa15.77■□□□□ 0.12
LINC00642-201ENST00000419459 NYXQ9GZU5 481 aa15.77■□□□□ 0.12
LINC00642-201ENST00000419459 SPEF2Q9C093 1822 aa15.77■□□□□ 0.12
LINC00642-201ENST00000419459 MTX1Q13505 466 aa15.77■□□□□ 0.11
LINC00642-201ENST00000419459 SSH3Q8TE77 659 aa15.77■□□□□ 0.11
LINC00642-201ENST00000419459 ZNF594Q96JF6 807 aaPredicted RBP15.77■□□□□ 0.11
LINC00642-201ENST00000419459 CHMP5Q9NZZ3 219 aa15.77■□□□□ 0.11
LINC00642-201ENST00000419459 ANKRD31Q8N7Z5 1873 aa15.76■□□□□ 0.11
LINC00642-201ENST00000419459 POLA2Q14181 598 aa15.75■□□□□ 0.11
LINC00642-201ENST00000419459 PLA2G12BQ9BX93 195 aa15.75■□□□□ 0.11
LINC00642-201ENST00000419459 HDAC5Q9UQL6 1122 aa15.75■□□□□ 0.11
LINC00642-201ENST00000419459 ATF5Q9Y2D1 282 aaPredicted RBP15.75■□□□□ 0.11
LINC00642-201ENST00000419459 NRXN2Q9P2S2 1712 aa15.75■□□□□ 0.11
LINC00642-201ENST00000419459 HMMRO75330 724 aa15.75■□□□□ 0.11
LINC00642-201ENST00000419459 ITGA6P23229 1130 aa15.75■□□□□ 0.11
LINC00642-201ENST00000419459 SEC31BQ9NQW1 1179 aa15.75■□□□□ 0.11
LINC00642-201ENST00000419459 PARP3Q9Y6F1 533 aa15.75■□□□□ 0.11
LINC00642-201ENST00000419459 DDX11L8A8MPP1 907 aa15.74■□□□□ 0.11
LINC00642-201ENST00000419459 SURF6O75683 361 aaKnown RBP15.74■□□□□ 0.11
LINC00642-201ENST00000419459 CSF1RP07333 972 aa15.74■□□□□ 0.11
LINC00642-201ENST00000419459 RFX5P48382 616 aaPredicted RBP15.73■□□□□ 0.11
LINC00642-201ENST00000419459 PTPN12Q05209 780 aaKnown RBP15.73■□□□□ 0.11
LINC00642-201ENST00000419459 CCDC57Q2TAC2 916 aa15.73■□□□□ 0.11
LINC00642-201ENST00000419459 DCTPP1Q9H773 170 aa15.73■□□□□ 0.11
LINC00642-201ENST00000419459 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.73■□□□□ 0.11
LINC00642-201ENST00000419459 SMARCA5O60264 1052 aaPredicted RBP15.72■□□□□ 0.11
LINC00642-201ENST00000419459 HSP90AA1P07900 732 aaKnown RBP15.72■□□□□ 0.11
LINC00642-201ENST00000419459 ST5P78524 1137 aa15.72■□□□□ 0.11
LINC00642-201ENST00000419459 IFIT5Q13325 482 aaKnown RBP15.72■□□□□ 0.11
LINC00642-201ENST00000419459 SLC51AQ86UW1 340 aa15.72■□□□□ 0.11
LINC00642-201ENST00000419459 SMC5Q8IY18 1101 aa15.72■□□□□ 0.11
LINC00642-201ENST00000419459 NLRP3Q96P20 1036 aa15.72■□□□□ 0.11
LINC00642-201ENST00000419459 NAP1L5Q96NT1 182 aaPredicted RBP15.72■□□□□ 0.11
LINC00642-201ENST00000419459 PUS3Q9BZE2 481 aaKnown RBP15.72■□□□□ 0.11
LINC00642-201ENST00000419459 TRAK2O60296 914 aa15.71■□□□□ 0.11
LINC00642-201ENST00000419459 CCDC152Q4G0S7 254 aa15.71■□□□□ 0.11
LINC00642-201ENST00000419459 LRRC24Q50LG9 513 aa15.71■□□□□ 0.11
LINC00642-201ENST00000419459 SLC10A5Q5PT55 438 aa15.71■□□□□ 0.11
LINC00642-201ENST00000419459 ANKRD45Q5TZF3 282 aa15.71■□□□□ 0.11
LINC00642-201ENST00000419459 LNPKQ9C0E8 428 aa15.71■□□□□ 0.11
LINC00642-201ENST00000419459 CACNA1SQ13698 1873 aa15.71■□□□□ 0.11
LINC00642-201ENST00000419459 COL11A2P13942 1736 aaPredicted RBP15.71■□□□□ 0.1
LINC00642-201ENST00000419459 PTMSP20962 102 aa15.7■□□□□ 0.1
LINC00642-201ENST00000419459 OS9Q13438 667 aaPredicted RBP15.7■□□□□ 0.1
LINC00642-201ENST00000419459 SLC16A10Q8TF71 515 aa15.7■□□□□ 0.1
LINC00642-201ENST00000419459 IL1RAPL2Q9NP60 686 aa15.7■□□□□ 0.1
LINC00642-201ENST00000419459 PDZRN3Q9UPQ7 1066 aa15.7■□□□□ 0.1
LINC00642-201ENST00000419459 TAF7LQ5H9L4 462 aa15.7■□□□□ 0.1
LINC00642-201ENST00000419459 GCC1Q96CN9 775 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms