RNA–Protein interactions for RNA: ENST00000418994.1

CAPN7-203, Transcript of calpain 7, humanhuman

TSL 5

Gene CAPN7, Length 781 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN7-203ENST00000418994 JARID2Q92833 1246 aaPredicted RBP33.27■■■□□ 2.92
CAPN7-203ENST00000418994 GLTPD2A6NH11 291 aa33.26■■■□□ 2.91
CAPN7-203ENST00000418994 CDHR2Q9BYE9 1310 aa33.25■■■□□ 2.91
CAPN7-203ENST00000418994 PDE8AO60658 829 aa33.24■■■□□ 2.91
CAPN7-203ENST00000418994 IARSP41252 1262 aaKnown RBP33.24■■■□□ 2.91
CAPN7-203ENST00000418994 SP8Q8IXZ3 490 aa33.24■■■□□ 2.91
CAPN7-203ENST00000418994 TMC4Q7Z404 712 aa33.23■■■□□ 2.91
CAPN7-203ENST00000418994 TRMT2AQ8IZ69 625 aaKnown RBP33.23■■■□□ 2.91
CAPN7-203ENST00000418994 DPY19L2Q6NUT2 758 aa33.22■■■□□ 2.91
CAPN7-203ENST00000418994 LINS1Q8NG48 757 aa33.22■■■□□ 2.91
CAPN7-203ENST00000418994 TAF1P21675 1872 aa33.22■■■□□ 2.91
CAPN7-203ENST00000418994 GCKRQ14397 625 aa33.21■■■□□ 2.91
CAPN7-203ENST00000418994 F6X3S4 739 aa33.2■■■□□ 2.91
CAPN7-203ENST00000418994 CCDC152Q4G0S7 254 aa33.2■■■□□ 2.91
CAPN7-203ENST00000418994 CELF1Q92879 486 aaKnown RBP33.2■■■□□ 2.91
CAPN7-203ENST00000418994 H7C1W4 665 aa33.19■■■□□ 2.9
CAPN7-203ENST00000418994 RRAGCQ9HB90 399 aa33.19■■■□□ 2.9
CAPN7-203ENST00000418994 UBE3BQ7Z3V4 1068 aa33.18■■■□□ 2.9
CAPN7-203ENST00000418994 MRPL50Q8N5N7 158 aaKnown RBP33.17■■■□□ 2.9
CAPN7-203ENST00000418994 BEND3Q5T5X7 828 aa33.16■■■□□ 2.9
CAPN7-203ENST00000418994 DPP8Q6V1X1 898 aaPredicted RBP33.16■■■□□ 2.9
CAPN7-203ENST00000418994 MPNDQ8N594 471 aa33.16■■■□□ 2.9
CAPN7-203ENST00000418994 SUPT20HQ8NEM7 779 aa33.16■■■□□ 2.9
CAPN7-203ENST00000418994 CTSWP56202 376 aa33.15■■■□□ 2.9
CAPN7-203ENST00000418994 RPS8P62241 208 aaKnown RBP33.15■■■□□ 2.9
CAPN7-203ENST00000418994 JDP2Q8WYK2 163 aa33.15■■■□□ 2.9
CAPN7-203ENST00000418994 RTFDC1Q9BY42 306 aaPredicted RBP33.15■■■□□ 2.9
CAPN7-203ENST00000418994 SEC31BQ9NQW1 1179 aa33.15■■■□□ 2.9
CAPN7-203ENST00000418994 COL4A1P02462 1669 aa33.14■■■□□ 2.9
CAPN7-203ENST00000418994 SSH1Q8WYL5 1049 aa33.14■■■□□ 2.9
CAPN7-203ENST00000418994 CCDC85AQ96PX6 553 aaPredicted RBP33.14■■■□□ 2.9
CAPN7-203ENST00000418994 LRRC37AA6NMS7 1700 aa33.14■■■□□ 2.89
CAPN7-203ENST00000418994 TOMM70O94826 608 aa33.13■■■□□ 2.89
CAPN7-203ENST00000418994 C16orf71Q8IYS4 520 aaPredicted RBP33.13■■■□□ 2.89
CAPN7-203ENST00000418994 LARGE2Q8N3Y3 721 aa33.13■■■□□ 2.89
CAPN7-203ENST00000418994 VPS33BQ9H267 617 aa33.13■■■□□ 2.89
CAPN7-203ENST00000418994 WDR90Q96KV7 1748 aa33.12■■■□□ 2.89
CAPN7-203ENST00000418994 FZD9O00144 591 aa33.12■■■□□ 2.89
CAPN7-203ENST00000418994 CT47B1P0C2W7 299 aaPredicted RBP33.12■■■□□ 2.89
CAPN7-203ENST00000418994 VEGFAP15692 232 aaPredicted RBP33.12■■■□□ 2.89
CAPN7-203ENST00000418994 CASP7P55210 303 aa33.12■■■□□ 2.89
CAPN7-203ENST00000418994 PPIP5K2O43314 1243 aa33.11■■■□□ 2.89
CAPN7-203ENST00000418994 DDNO94850 711 aaPredicted RBP33.11■■■□□ 2.89
CAPN7-203ENST00000418994 ALDH1L2Q3SY69 923 aa33.11■■■□□ 2.89
CAPN7-203ENST00000418994 TTLL11Q8NHH1 800 aa33.11■■■□□ 2.89
CAPN7-203ENST00000418994 PLA2G12BQ9BX93 195 aa33.11■■■□□ 2.89
CAPN7-203ENST00000418994 MYH3P11055 1940 aa33.1■■■□□ 2.89
CAPN7-203ENST00000418994 ZNF541Q9H0D2 1346 aa33.1■■■□□ 2.89
CAPN7-203ENST00000418994 SLC4A10Q6U841 1118 aa33.1■■■□□ 2.89
CAPN7-203ENST00000418994 COL4A5P29400 1685 aa33.1■■■□□ 2.89
CAPN7-203ENST00000418994 PTPRCP08575 1304 aa33.09■■■□□ 2.89
CAPN7-203ENST00000418994 BCL2L13Q9BXK5 485 aa33.09■■■□□ 2.89
CAPN7-203ENST00000418994 HNRNPUQ00839 825 aaKnown RBP eCLIP33.08■■■□□ 2.89
CAPN7-203ENST00000418994 AOC3Q16853 763 aa33.08■■■□□ 2.89
CAPN7-203ENST00000418994 NIM1KQ8IY84 436 aa33.08■■■□□ 2.89
CAPN7-203ENST00000418994 RTL9Q8NET4 1388 aa33.08■■■□□ 2.89
CAPN7-203ENST00000418994 ALDH1L1O75891 902 aa33.07■■■□□ 2.88
CAPN7-203ENST00000418994 ANKRD18AQ8IVF6 992 aa33.07■■■□□ 2.88
CAPN7-203ENST00000418994 CDC5LQ99459 802 aaKnown RBP33.07■■■□□ 2.88
CAPN7-203ENST00000418994 GREM2Q9H772 168 aa33.07■■■□□ 2.88
CAPN7-203ENST00000418994 NSFL1CQ9UNZ2 370 aaKnown RBP33.07■■■□□ 2.88
CAPN7-203ENST00000418994 POTECB2RU33 542 aa33.06■■■□□ 2.88
CAPN7-203ENST00000418994 RBM46Q8TBY0 533 aaKnown RBP33.06■■■□□ 2.88
CAPN7-203ENST00000418994 SRCIN1Q9C0H9 1055 aa33.06■■■□□ 2.88
CAPN7-203ENST00000418994 SMC4Q9NTJ3 1288 aa33.06■■■□□ 2.88
CAPN7-203ENST00000418994 DUOX1Q9NRD9 1551 aa33.05■■■□□ 2.88
CAPN7-203ENST00000418994 EIF6P56537 245 aaKnown RBP33.05■■■□□ 2.88
CAPN7-203ENST00000418994 GPSM2P81274 684 aa33.05■■■□□ 2.88
CAPN7-203ENST00000418994 L3MBTL3Q96JM7 780 aaPredicted RBP33.05■■■□□ 2.88
CAPN7-203ENST00000418994 CEP350Q5VT06 3117 aa33.05■■■□□ 2.88
CAPN7-203ENST00000418994 KIAA2012Q0VF49 1180 aa33.04■■■□□ 2.88
CAPN7-203ENST00000418994 GRM8O00222 908 aa33.03■■■□□ 2.88
CAPN7-203ENST00000418994 GPC2Q8N158 579 aa33.02■■■□□ 2.88
CAPN7-203ENST00000418994 C9orf78Q9NZ63 289 aaPredicted RBP33.02■■■□□ 2.88
CAPN7-203ENST00000418994 CSF1RP07333 972 aa33.01■■■□□ 2.87
CAPN7-203ENST00000418994 POLLQ9UGP5 575 aa33.01■■■□□ 2.87
CAPN7-203ENST00000418994 LTBP1Q14766 1721 aa33■■■□□ 2.87
CAPN7-203ENST00000418994 IQCA1LA6NCM1 817 aa33■■■□□ 2.87
CAPN7-203ENST00000418994 C6orf229H3BNL8 230 aa33■■■□□ 2.87
CAPN7-203ENST00000418994 HSPA6P17066 643 aa33■■■□□ 2.87
CAPN7-203ENST00000418994 PODXL2Q9NZ53 605 aa33■■■□□ 2.87
CAPN7-203ENST00000418994 ZNRF3Q9ULT6 936 aa33■■■□□ 2.87
CAPN7-203ENST00000418994 FAM161AQ3B820 660 aa32.99■■■□□ 2.87
CAPN7-203ENST00000418994 ANKIB1Q9P2G1 1089 aa32.99■■■□□ 2.87
CAPN7-203ENST00000418994 ITGA6P23229 1130 aa32.98■■■□□ 2.87
CAPN7-203ENST00000418994 WASHC4Q2M389 1173 aa32.98■■■□□ 2.87
CAPN7-203ENST00000418994 TBC1D16Q8TBP0 767 aa32.98■■■□□ 2.87
CAPN7-203ENST00000418994 EYA3Q99504 573 aa32.98■■■□□ 2.87
CAPN7-203ENST00000418994 BSDC1Q9NW68 430 aaPredicted RBP32.98■■■□□ 2.87
CAPN7-203ENST00000418994 GJA3Q9Y6H8 435 aa32.98■■■□□ 2.87
CAPN7-203ENST00000418994 FOXO4P98177 505 aa32.97■■■□□ 2.87
CAPN7-203ENST00000418994 FSTL1Q12841 308 aa32.97■■■□□ 2.87
CAPN7-203ENST00000418994 SCN4AP35499 1836 aa32.97■■■□□ 2.87
CAPN7-203ENST00000418994 IGHMBP2P38935 993 aaKnown RBP32.96■■■□□ 2.87
CAPN7-203ENST00000418994 RARSP54136 660 aaKnown RBP32.96■■■□□ 2.87
CAPN7-203ENST00000418994 BRPF1P55201 1214 aaPredicted RBP32.96■■■□□ 2.87
CAPN7-203ENST00000418994 SMC1BQ8NDV3 1235 aa32.96■■■□□ 2.87
CAPN7-203ENST00000418994 GGA1Q9UJY5 639 aa32.96■■■□□ 2.87
CAPN7-203ENST00000418994 UFL1O94874 794 aa32.95■■■□□ 2.87
CAPN7-203ENST00000418994 HACL1Q9UJ83 578 aa32.94■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 108.5 ms