RNA–Protein interactions for RNA: ENST00000418800.6

DDR1-232, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene DDR1, Length 3,588 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-232ENST00000418800 RPAP1Q9BWH6 1393 aaPredicted RBP13.65□□□□□ -0.22
DDR1-232ENST00000418800 FAM135BQ49AJ0 1406 aa13.65□□□□□ -0.22
DDR1-232ENST00000418800 A0A1B0GVL5 298 aa13.65□□□□□ -0.22
DDR1-232ENST00000418800 LTKP29376 864 aa13.65□□□□□ -0.22
DDR1-232ENST00000418800 CLCN6P51797 869 aa13.65□□□□□ -0.22
DDR1-232ENST00000418800 ZSCAN26Q16670 478 aa13.65□□□□□ -0.22
DDR1-232ENST00000418800 C11orf57Q6ZUT1 292 aaPredicted RBP13.65□□□□□ -0.22
DDR1-232ENST00000418800 AK7Q96M32 723 aa13.65□□□□□ -0.22
DDR1-232ENST00000418800 NCOA5Q9HCD5 579 aaKnown RBP13.65□□□□□ -0.22
DDR1-232ENST00000418800 ACEP12821 1306 aa13.65□□□□□ -0.22
DDR1-232ENST00000418800 PUS7Q96PZ0 661 aaKnown RBP13.65□□□□□ -0.23
DDR1-232ENST00000418800 EYA1Q99502 592 aa13.65□□□□□ -0.23
DDR1-232ENST00000418800 CARD6Q9BX69 1037 aa13.65□□□□□ -0.23
DDR1-232ENST00000418800 NPHP3Q7Z494 1330 aa13.65□□□□□ -0.23
DDR1-232ENST00000418800 ATP10DQ9P241 1426 aa13.64□□□□□ -0.23
DDR1-232ENST00000418800 ST5P78524 1137 aa13.64□□□□□ -0.23
DDR1-232ENST00000418800 VPS53Q5VIR6 699 aa13.64□□□□□ -0.23
DDR1-232ENST00000418800 RIC3Q7Z5B4 369 aa13.64□□□□□ -0.23
DDR1-232ENST00000418800 VWDEQ8N2E2 1590 aa13.64□□□□□ -0.23
DDR1-232ENST00000418800 LRRC7Q96NW7 1537 aa13.64□□□□□ -0.23
DDR1-232ENST00000418800 OAS2P29728 719 aaKnown RBP13.64□□□□□ -0.23
DDR1-232ENST00000418800 GOLGA8FQ08AF8 430 aa13.64□□□□□ -0.23
DDR1-232ENST00000418800 GOLGA8DPQ0D2H9 430 aa13.64□□□□□ -0.23
DDR1-232ENST00000418800 IFNKQ9P0W0 207 aa13.64□□□□□ -0.23
DDR1-232ENST00000418800 CFAP45Q9UL16 551 aa13.64□□□□□ -0.23
DDR1-232ENST00000418800 RNF17Q9BXT8 1623 aaKnown RBP13.64□□□□□ -0.23
DDR1-232ENST00000418800 CFAP100Q494V2 611 aa13.63□□□□□ -0.23
DDR1-232ENST00000418800 Q6ZUG5 572 aa13.63□□□□□ -0.23
DDR1-232ENST00000418800 DHX37Q8IY37 1157 aaKnown RBP13.63□□□□□ -0.23
DDR1-232ENST00000418800 LRRN4CLQ8ND94 238 aa13.63□□□□□ -0.23
DDR1-232ENST00000418800 TSPYL1Q9H0U9 437 aa13.63□□□□□ -0.23
DDR1-232ENST00000418800 TAF6LQ9Y6J9 622 aa13.63□□□□□ -0.23
DDR1-232ENST00000418800 CPLX1O14810 134 aa13.63□□□□□ -0.23
DDR1-232ENST00000418800 DDX46Q7L014 1031 aaKnown RBP13.63□□□□□ -0.23
DDR1-232ENST00000418800 CCDC102AQ96A19 550 aa13.63□□□□□ -0.23
DDR1-232ENST00000418800 NAT10Q9H0A0 1025 aaKnown RBP13.63□□□□□ -0.23
DDR1-232ENST00000418800 FEZ2Q9UHY8 353 aaPredicted RBP13.63□□□□□ -0.23
DDR1-232ENST00000418800 KCNQ3O43525 872 aa13.62□□□□□ -0.23
DDR1-232ENST00000418800 ABTB2Q8N961 1025 aa13.62□□□□□ -0.23
DDR1-232ENST00000418800 RNF216Q9NWF9 866 aaPredicted RBP13.62□□□□□ -0.23
DDR1-232ENST00000418800 MAP3K2Q9Y2U5 619 aa13.62□□□□□ -0.23
DDR1-232ENST00000418800 CHGBP05060 677 aa13.62□□□□□ -0.23
DDR1-232ENST00000418800 PNMA6AP0CW24 399 aaPredicted RBP13.62□□□□□ -0.23
DDR1-232ENST00000418800 SHPRHQ149N8 1683 aa13.62□□□□□ -0.23
DDR1-232ENST00000418800 PIK3R4Q99570 1358 aa13.62□□□□□ -0.23
DDR1-232ENST00000418800 SLC27A2O14975 620 aa13.62□□□□□ -0.23
DDR1-232ENST00000418800 E2F4Q16254 413 aa13.62□□□□□ -0.23
DDR1-232ENST00000418800 SYNE3Q6ZMZ3 975 aa13.62□□□□□ -0.23
DDR1-232ENST00000418800 DDX17Q92841 729 aaKnown RBP13.62□□□□□ -0.23
DDR1-232ENST00000418800 CLSTN2Q9H4D0 955 aa13.62□□□□□ -0.23
DDR1-232ENST00000418800 SIGLEC1Q9BZZ2 1709 aa13.62□□□□□ -0.23
DDR1-232ENST00000418800 TXLNBQ8N3L3 684 aa13.61□□□□□ -0.23
DDR1-232ENST00000418800 SEC62Q99442 399 aaKnown RBP13.61□□□□□ -0.23
DDR1-232ENST00000418800 PLEKHA4Q9H4M7 779 aa13.61□□□□□ -0.23
DDR1-232ENST00000418800 RABEP2Q9H5N1 569 aa13.61□□□□□ -0.23
DDR1-232ENST00000418800 ANO10Q9NW15 660 aa13.61□□□□□ -0.23
DDR1-232ENST00000418800 SPHKAPQ2M3C7 1700 aa13.61□□□□□ -0.23
DDR1-232ENST00000418800 A0A0D9SFI3 127 aa13.61□□□□□ -0.23
DDR1-232ENST00000418800 EVCP57679 992 aa13.61□□□□□ -0.23
DDR1-232ENST00000418800 HAND2P61296 217 aa13.61□□□□□ -0.23
DDR1-232ENST00000418800 ANKRD1Q15327 319 aa13.61□□□□□ -0.23
DDR1-232ENST00000418800 STX1AQ16623 288 aa13.61□□□□□ -0.23
DDR1-232ENST00000418800 NOM1Q5C9Z4 860 aaKnown RBP13.61□□□□□ -0.23
DDR1-232ENST00000418800 TTC14Q96N46 770 aa13.61□□□□□ -0.23
DDR1-232ENST00000418800 SRRTQ9BXP5 876 aaKnown RBP13.61□□□□□ -0.23
DDR1-232ENST00000418800 VPS18Q9P253 973 aa13.61□□□□□ -0.23
DDR1-232ENST00000418800 MED14O60244 1454 aa13.61□□□□□ -0.23
DDR1-232ENST00000418800 MYOM2P54296 1465 aa13.61□□□□□ -0.23
DDR1-232ENST00000418800 TTC21BQ7Z4L5 1316 aa13.61□□□□□ -0.23
DDR1-232ENST00000418800 APOBRQ0VD83 1088 aa13.61□□□□□ -0.23
DDR1-232ENST00000418800 PI4K2BQ8TCG2 481 aa13.61□□□□□ -0.23
DDR1-232ENST00000418800 SMARCE1Q969G3 411 aa13.61□□□□□ -0.23
DDR1-232ENST00000418800 MARCKSP29966 332 aaPredicted RBP13.6□□□□□ -0.23
DDR1-232ENST00000418800 GNG11P61952 73 aa13.6□□□□□ -0.23
DDR1-232ENST00000418800 EVI5LQ96CN4 794 aa13.6□□□□□ -0.23
DDR1-232ENST00000418800 CCDC85AQ96PX6 553 aaPredicted RBP13.6□□□□□ -0.23
DDR1-232ENST00000418800 TULP4Q9NRJ4 1543 aa13.6□□□□□ -0.23
DDR1-232ENST00000418800 NEK1Q96PY6 1258 aa13.6□□□□□ -0.23
DDR1-232ENST00000418800 TLR7Q9NYK1 1049 aaKnown RBP13.6□□□□□ -0.23
DDR1-232ENST00000418800 CPLX3Q8WVH0 158 aa13.6□□□□□ -0.23
DDR1-232ENST00000418800 PGBD1Q96JS3 809 aa13.6□□□□□ -0.23
DDR1-232ENST00000418800 STAP2Q9UGK3 403 aa13.6□□□□□ -0.23
DDR1-232ENST00000418800 LOC102724159A0A0B4J2E5 919 aa13.59□□□□□ -0.23
DDR1-232ENST00000418800 BTBD11A6QL63 1104 aa13.59□□□□□ -0.23
DDR1-232ENST00000418800 MYO1CO00159 1063 aa13.59□□□□□ -0.23
DDR1-232ENST00000418800 HSPA2P54652 639 aa13.59□□□□□ -0.23
DDR1-232ENST00000418800 PWP2Q15269 919 aaKnown RBP13.59□□□□□ -0.23
DDR1-232ENST00000418800 SLFNL1Q499Z3 407 aa13.59□□□□□ -0.23
DDR1-232ENST00000418800 HSP90B2PQ58FF3 399 aa13.59□□□□□ -0.23
DDR1-232ENST00000418800 DEF6Q9H4E7 631 aa13.59□□□□□ -0.23
DDR1-232ENST00000418800 LGR6Q9HBX8 967 aa13.59□□□□□ -0.23
DDR1-232ENST00000418800 TET3O43151 1660 aa13.59□□□□□ -0.23
DDR1-232ENST00000418800 GOLGB1Q14789 3259 aaKnown RBP13.59□□□□□ -0.23
DDR1-232ENST00000418800 SART3Q15020 963 aaKnown RBP13.59□□□□□ -0.23
DDR1-232ENST00000418800 WASHC4Q2M389 1173 aa13.59□□□□□ -0.23
DDR1-232ENST00000418800 UTP14AQ9BVJ6 771 aaKnown RBP13.59□□□□□ -0.23
DDR1-232ENST00000418800 ZFYVE9O95405 1425 aa13.59□□□□□ -0.23
DDR1-232ENST00000418800 SMC1AQ14683 1233 aaKnown RBP13.58□□□□□ -0.23
DDR1-232ENST00000418800 SSH3Q8TE77 659 aa13.58□□□□□ -0.23
DDR1-232ENST00000418800 ARFGAP3Q9NP61 516 aa13.58□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms