RNA–Protein interactions for RNA: ENST00000418713.5

RPUSD3-202, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 955 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-202ENST00000418713 LTBP3Q9NS15 1303 aa25.05■■□□□ 1.6
RPUSD3-202ENST00000418713 SLX4Q8IY92 1834 aa25.05■■□□□ 1.6
RPUSD3-202ENST00000418713 GRM8O00222 908 aa25.04■■□□□ 1.6
RPUSD3-202ENST00000418713 SP8Q8IXZ3 490 aa25.04■■□□□ 1.6
RPUSD3-202ENST00000418713 ATP6V0A2Q9Y487 856 aa25.04■■□□□ 1.6
RPUSD3-202ENST00000418713 ABCC4O15439 1325 aa25.04■■□□□ 1.6
RPUSD3-202ENST00000418713 TNRC6CQ9HCJ0 1690 aaKnown RBP25.04■■□□□ 1.6
RPUSD3-202ENST00000418713 CTSWP56202 376 aa25.03■■□□□ 1.6
RPUSD3-202ENST00000418713 CDC5LQ99459 802 aaKnown RBP25.03■■□□□ 1.6
RPUSD3-202ENST00000418713 RPS8P62241 208 aaKnown RBP25.02■■□□□ 1.6
RPUSD3-202ENST00000418713 JARID2Q92833 1246 aaPredicted RBP25.02■■□□□ 1.6
RPUSD3-202ENST00000418713 ZC3H4Q9UPT8 1303 aaKnown RBP25.02■■□□□ 1.6
RPUSD3-202ENST00000418713 FKBP4Q02790 459 aaKnown RBP eCLIP25.01■■□□□ 1.59
RPUSD3-202ENST00000418713 C9orf131Q5VYM1 1079 aa25.01■■□□□ 1.59
RPUSD3-202ENST00000418713 SUPT20HQ8NEM7 779 aa25.01■■□□□ 1.59
RPUSD3-202ENST00000418713 PSMD1Q99460 953 aa25.01■■□□□ 1.59
RPUSD3-202ENST00000418713 TTLL11Q8NHH1 800 aa25■■□□□ 1.59
RPUSD3-202ENST00000418713 VPS33BQ9H267 617 aa25■■□□□ 1.59
RPUSD3-202ENST00000418713 RNF181Q9P0P0 153 aa25■■□□□ 1.59
RPUSD3-202ENST00000418713 DDX60Q8IY21 1712 aaKnown RBP25■■□□□ 1.59
RPUSD3-202ENST00000418713 LAMB2P55268 1798 aa24.99■■□□□ 1.59
RPUSD3-202ENST00000418713 ANKRD18AQ8IVF6 992 aa24.99■■□□□ 1.59
RPUSD3-202ENST00000418713 CACNA1SQ13698 1873 aa24.98■■□□□ 1.59
RPUSD3-202ENST00000418713 NFKBIEO00221 500 aa24.98■■□□□ 1.59
RPUSD3-202ENST00000418713 CASP7P55210 303 aa24.98■■□□□ 1.59
RPUSD3-202ENST00000418713 ZKSCAN2Q63HK3 967 aa24.98■■□□□ 1.59
RPUSD3-202ENST00000418713 FRAT1Q92837 279 aaPredicted RBP24.98■■□□□ 1.59
RPUSD3-202ENST00000418713 RTL9Q8NET4 1388 aa24.97■■□□□ 1.59
RPUSD3-202ENST00000418713 UTYO14607 1347 aa24.96■■□□□ 1.59
RPUSD3-202ENST00000418713 BCAR3O75815 825 aa24.96■■□□□ 1.59
RPUSD3-202ENST00000418713 CSF1RP07333 972 aa24.96■■□□□ 1.59
RPUSD3-202ENST00000418713 MS4A1P11836 297 aa24.96■■□□□ 1.59
RPUSD3-202ENST00000418713 RASSF7Q02833 373 aa24.96■■□□□ 1.59
RPUSD3-202ENST00000418713 ATF7IPQ6VMQ6 1270 aa24.96■■□□□ 1.59
RPUSD3-202ENST00000418713 MPNDQ8N594 471 aa24.96■■□□□ 1.59
RPUSD3-202ENST00000418713 UTRNP46939 3433 aa24.96■■□□□ 1.59
RPUSD3-202ENST00000418713 IGHMBP2P38935 993 aaKnown RBP24.95■■□□□ 1.58
RPUSD3-202ENST00000418713 DPP8Q6V1X1 898 aaPredicted RBP24.95■■□□□ 1.58
RPUSD3-202ENST00000418713 CELF1Q92879 486 aaKnown RBP24.95■■□□□ 1.58
RPUSD3-202ENST00000418713 FER1L6Q2WGJ9 1857 aa24.95■■□□□ 1.58
RPUSD3-202ENST00000418713 ANKRD18BA2A2Z9 1011 aa24.94■■□□□ 1.58
RPUSD3-202ENST00000418713 DPY19L2Q6NUT2 758 aa24.94■■□□□ 1.58
RPUSD3-202ENST00000418713 JDP2Q8WYK2 163 aa24.94■■□□□ 1.58
RPUSD3-202ENST00000418713 GOLGB1Q14789 3259 aaKnown RBP24.94■■□□□ 1.58
RPUSD3-202ENST00000418713 MYH3P11055 1940 aa24.94■■□□□ 1.58
RPUSD3-202ENST00000418713 IFIT5Q13325 482 aaKnown RBP24.93■■□□□ 1.58
RPUSD3-202ENST00000418713 CCDC85AQ96PX6 553 aaPredicted RBP24.93■■□□□ 1.58
RPUSD3-202ENST00000418713 MPHOSPH8Q99549 860 aa24.93■■□□□ 1.58
RPUSD3-202ENST00000418713 GREM2Q9H772 168 aa24.93■■□□□ 1.58
RPUSD3-202ENST00000418713 SEC31BQ9NQW1 1179 aa24.93■■□□□ 1.58
RPUSD3-202ENST00000418713 CCDC57Q2TAC2 916 aa24.92■■□□□ 1.58
RPUSD3-202ENST00000418713 INTS3Q68E01 1043 aaKnown RBP24.92■■□□□ 1.58
RPUSD3-202ENST00000418713 BSDC1Q9NW68 430 aaPredicted RBP24.92■■□□□ 1.58
RPUSD3-202ENST00000418713 CHMP3Q9Y3E7 222 aa24.92■■□□□ 1.58
RPUSD3-202ENST00000418713 SBF1O95248 1867 aa24.92■■□□□ 1.58
RPUSD3-202ENST00000418713 NBPF7P0C2Y1 421 aaPredicted RBP24.91■■□□□ 1.58
RPUSD3-202ENST00000418713 ITGA6P23229 1130 aa24.91■■□□□ 1.58
RPUSD3-202ENST00000418713 IARSP41252 1262 aaKnown RBP24.91■■□□□ 1.58
RPUSD3-202ENST00000418713 RTFDC1Q9BY42 306 aaPredicted RBP24.91■■□□□ 1.58
RPUSD3-202ENST00000418713 USP44Q9H0E7 712 aa24.91■■□□□ 1.58
RPUSD3-202ENST00000418713 NSFL1CQ9UNZ2 370 aaKnown RBP24.91■■□□□ 1.58
RPUSD3-202ENST00000418713 KDM2BQ8NHM5 1336 aa24.9■■□□□ 1.58
RPUSD3-202ENST00000418713 TRIM27P14373 513 aa24.9■■□□□ 1.58
RPUSD3-202ENST00000418713 FOXO4P98177 505 aa24.9■■□□□ 1.58
RPUSD3-202ENST00000418713 LMBR1LQ6UX01 489 aa24.9■■□□□ 1.58
RPUSD3-202ENST00000418713 OLFM4Q6UX06 510 aa24.9■■□□□ 1.58
RPUSD3-202ENST00000418713 FTSJ3Q8IY81 847 aaKnown RBP24.9■■□□□ 1.58
RPUSD3-202ENST00000418713 ZNF784Q8NCA9 323 aaPredicted RBP24.9■■□□□ 1.58
RPUSD3-202ENST00000418713 EYA3Q99504 573 aa24.9■■□□□ 1.58
RPUSD3-202ENST00000418713 GNAI3P08754 354 aa24.89■■□□□ 1.58
RPUSD3-202ENST00000418713 UBTFL1P0CB47 393 aaPredicted RBP24.89■■□□□ 1.58
RPUSD3-202ENST00000418713 TAF7LQ5H9L4 462 aa24.89■■□□□ 1.58
RPUSD3-202ENST00000418713 GPBP1L1Q9HC44 474 aaPredicted RBP24.89■■□□□ 1.58
RPUSD3-202ENST00000418713 ZNF277Q9NRM2 450 aaPredicted RBP24.89■■□□□ 1.58
RPUSD3-202ENST00000418713 ANKIB1Q9P2G1 1089 aa24.89■■□□□ 1.58
RPUSD3-202ENST00000418713 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.88■■□□□ 1.57
RPUSD3-202ENST00000418713 PODXL2Q9NZ53 605 aa24.88■■□□□ 1.57
RPUSD3-202ENST00000418713 RCAN3Q9UKA8 241 aa24.88■■□□□ 1.57
RPUSD3-202ENST00000418713 FAM161AQ3B820 660 aa24.87■■□□□ 1.57
RPUSD3-202ENST00000418713 LARGE2Q8N3Y3 721 aa24.87■■□□□ 1.57
RPUSD3-202ENST00000418713 ANKRD2Q9GZV1 360 aa24.87■■□□□ 1.57
RPUSD3-202ENST00000418713 CCDC88AQ3V6T2 1871 aa24.86■■□□□ 1.57
RPUSD3-202ENST00000418713 SUCLG2Q96I99 432 aa24.86■■□□□ 1.57
RPUSD3-202ENST00000418713 YTHDC1Q96MU7 727 aaKnown RBP24.86■■□□□ 1.57
RPUSD3-202ENST00000418713 XDHP47989 1333 aa24.86■■□□□ 1.57
RPUSD3-202ENST00000418713 C6orf229H3BNL8 230 aa24.85■■□□□ 1.57
RPUSD3-202ENST00000418713 PPIP5K2O43314 1243 aa24.85■■□□□ 1.57
RPUSD3-202ENST00000418713 ATP2B4P23634 1241 aa24.85■■□□□ 1.57
RPUSD3-202ENST00000418713 RABL6Q3YEC7 729 aaPredicted RBP24.85■■□□□ 1.57
RPUSD3-202ENST00000418713 NIM1KQ8IY84 436 aa24.85■■□□□ 1.57
RPUSD3-202ENST00000418713 DZIP1LQ8IYY4 767 aaKnown RBP24.85■■□□□ 1.57
RPUSD3-202ENST00000418713 GGA1Q9UJY5 639 aa24.85■■□□□ 1.57
RPUSD3-202ENST00000418713 DICER1Q9UPY3 1922 aaKnown RBP24.84■■□□□ 1.57
RPUSD3-202ENST00000418713 GLTPD2A6NH11 291 aa24.84■■□□□ 1.57
RPUSD3-202ENST00000418713 EIF6P56537 245 aaKnown RBP24.84■■□□□ 1.57
RPUSD3-202ENST00000418713 WASHC4Q2M389 1173 aa24.84■■□□□ 1.57
RPUSD3-202ENST00000418713 CLUAP1Q96AJ1 413 aa24.84■■□□□ 1.57
RPUSD3-202ENST00000418713 SNED1Q8TER0 1413 aa24.84■■□□□ 1.57
RPUSD3-202ENST00000418713 PRELPP51888 382 aa24.83■■□□□ 1.57
RPUSD3-202ENST00000418713 GPSM2P81274 684 aa24.83■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms