RNA–Protein interactions for RNA: ENST00000418386.2

LTA-213, Transcript of lymphotoxin alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LTA, Length 1,422 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTA-213ENST00000418386 TTLL11Q8NHH1 800 aa16.76■□□□□ 0.27
LTA-213ENST00000418386 SERPINB2P05120 415 aa16.75■□□□□ 0.27
LTA-213ENST00000418386 GTF2E1P29083 439 aaPredicted RBP16.75■□□□□ 0.27
LTA-213ENST00000418386 SLC16A10Q8TF71 515 aa16.75■□□□□ 0.27
LTA-213ENST00000418386 COPRSQ9NQ92 184 aa16.75■□□□□ 0.27
LTA-213ENST00000418386 FAM161AQ3B820 660 aa16.74■□□□□ 0.27
LTA-213ENST00000418386 HSP90AB4PQ58FF6 505 aa16.74■□□□□ 0.27
LTA-213ENST00000418386 PRR5LQ6MZQ0 368 aa16.74■□□□□ 0.27
LTA-213ENST00000418386 CHMP3Q9Y3E7 222 aa16.74■□□□□ 0.27
LTA-213ENST00000418386 RAB11FIP3O75154 756 aa16.73■□□□□ 0.27
LTA-213ENST00000418386 NUCB1Q02818 461 aa16.73■□□□□ 0.27
LTA-213ENST00000418386 PTPN12Q05209 780 aaKnown RBP16.73■□□□□ 0.27
LTA-213ENST00000418386 SF3B3Q15393 1217 aaKnown RBP16.73■□□□□ 0.27
LTA-213ENST00000418386 CCDC152Q4G0S7 254 aa16.73■□□□□ 0.27
LTA-213ENST00000418386 PDZRN3Q9UPQ7 1066 aa16.73■□□□□ 0.27
LTA-213ENST00000418386 EXOC6BQ9Y2D4 811 aa16.73■□□□□ 0.27
LTA-213ENST00000418386 SRCAPQ6ZRS2 3230 aa16.73■□□□□ 0.27
LTA-213ENST00000418386 ANKRD31Q8N7Z5 1873 aa16.73■□□□□ 0.27
LTA-213ENST00000418386 SURF6O75683 361 aaKnown RBP16.72■□□□□ 0.27
LTA-213ENST00000418386 MMP10P09238 476 aa16.72■□□□□ 0.27
LTA-213ENST00000418386 ST5P78524 1137 aa16.72■□□□□ 0.27
LTA-213ENST00000418386 CCDC57Q2TAC2 916 aa16.72■□□□□ 0.27
LTA-213ENST00000418386 GREM2Q9H772 168 aa16.72■□□□□ 0.27
LTA-213ENST00000418386 PA2G4Q9UQ80 394 aaKnown RBP16.72■□□□□ 0.27
LTA-213ENST00000418386 NPHP1O15259 732 aa16.71■□□□□ 0.27
LTA-213ENST00000418386 IFIT5Q13325 482 aaKnown RBP16.71■□□□□ 0.27
LTA-213ENST00000418386 MSL1Q68DK7 614 aa16.71■□□□□ 0.27
LTA-213ENST00000418386 ERC1Q8IUD2 1116 aa16.71■□□□□ 0.27
LTA-213ENST00000418386 FBXO3Q9UK99 471 aa16.71■□□□□ 0.27
LTA-213ENST00000418386 PARP3Q9Y6F1 533 aa16.71■□□□□ 0.27
LTA-213ENST00000418386 ANKRD18BA2A2Z9 1011 aa16.7■□□□□ 0.26
LTA-213ENST00000418386 ITGA6P23229 1130 aa16.7■□□□□ 0.26
LTA-213ENST00000418386 C3orf67Q6ZVT6 689 aa16.7■□□□□ 0.26
LTA-213ENST00000418386 CHD1LQ86WJ1 897 aa16.7■□□□□ 0.26
LTA-213ENST00000418386 NLRP3Q96P20 1036 aa16.7■□□□□ 0.26
LTA-213ENST00000418386 PDGFDQ9GZP0 370 aaPredicted RBP16.7■□□□□ 0.26
LTA-213ENST00000418386 G3BP1Q13283 466 aaKnown RBP eCLIP16.7■□□□□ 0.26
LTA-213ENST00000418386 ANKRD45Q5TZF3 282 aa16.7■□□□□ 0.26
LTA-213ENST00000418386 KLHDC4Q8TBB5 520 aa16.7■□□□□ 0.26
LTA-213ENST00000418386 KIF1BPQ96EK5 621 aa16.7■□□□□ 0.26
LTA-213ENST00000418386 CCDC85AQ96PX6 553 aaPredicted RBP16.7■□□□□ 0.26
LTA-213ENST00000418386 LRRCC1Q9C099 1032 aa16.7■□□□□ 0.26
LTA-213ENST00000418386 CIAO1O76071 339 aa16.69■□□□□ 0.26
LTA-213ENST00000418386 OS9Q13438 667 aaPredicted RBP16.69■□□□□ 0.26
LTA-213ENST00000418386 SPEF2Q9C093 1822 aa16.68■□□□□ 0.26
LTA-213ENST00000418386 EYA2O00167 538 aa16.68■□□□□ 0.26
LTA-213ENST00000418386 TAF7LQ5H9L4 462 aa16.68■□□□□ 0.26
LTA-213ENST00000418386 CCDC24Q8N4L8 307 aa16.68■□□□□ 0.26
LTA-213ENST00000418386 RHPN1Q8TCX5 695 aa16.68■□□□□ 0.26
LTA-213ENST00000418386 LNPKQ9C0E8 428 aa16.68■□□□□ 0.26
LTA-213ENST00000418386 SIL1Q9H173 461 aa16.68■□□□□ 0.26
LTA-213ENST00000418386 ZBTB47Q9UFB7 747 aaPredicted RBP16.68■□□□□ 0.26
LTA-213ENST00000418386 KLRG2A4D1S0 409 aaPredicted RBP16.67■□□□□ 0.26
LTA-213ENST00000418386 IL15P40933 162 aaPredicted RBP16.67■□□□□ 0.26
LTA-213ENST00000418386 CRY2Q49AN0 593 aa16.67■□□□□ 0.26
LTA-213ENST00000418386 ATG9AQ7Z3C6 839 aa16.67■□□□□ 0.26
LTA-213ENST00000418386 ZNF594Q96JF6 807 aaPredicted RBP16.67■□□□□ 0.26
LTA-213ENST00000418386 CDC5LQ99459 802 aaKnown RBP16.67■□□□□ 0.26
LTA-213ENST00000418386 BRIP1Q9BX63 1249 aa16.67■□□□□ 0.26
LTA-213ENST00000418386 COL4A1P02462 1669 aa16.67■□□□□ 0.26
LTA-213ENST00000418386 APBB1O00213 710 aa16.66■□□□□ 0.26
LTA-213ENST00000418386 SASH1O94885 1247 aa16.66■□□□□ 0.26
LTA-213ENST00000418386 R3HDM1Q15032 1099 aaKnown RBP16.66■□□□□ 0.26
LTA-213ENST00000418386 ERICH6Q7L0X2 663 aa16.66■□□□□ 0.26
LTA-213ENST00000418386 SEC31BQ9NQW1 1179 aa16.66■□□□□ 0.26
LTA-213ENST00000418386 COL11A2P13942 1736 aaPredicted RBP16.66■□□□□ 0.26
LTA-213ENST00000418386 TAF1P21675 1872 aa16.66■□□□□ 0.26
LTA-213ENST00000418386 A0A1B0GUL6 1792 aa16.65■□□□□ 0.26
LTA-213ENST00000418386 C10orf71Q711Q0 1435 aa16.65■□□□□ 0.26
LTA-213ENST00000418386 SMARCA5O60264 1052 aaPredicted RBP16.65■□□□□ 0.26
LTA-213ENST00000418386 PDE4AP27815 886 aa16.65■□□□□ 0.26
LTA-213ENST00000418386 MTFR1LQ9H019 292 aa16.65■□□□□ 0.26
LTA-213ENST00000418386 KIF13BQ9NQT8 1826 aa16.65■□□□□ 0.26
LTA-213ENST00000418386 LRRC24Q50LG9 513 aa16.64■□□□□ 0.25
LTA-213ENST00000418386 SKAP1Q86WV1 359 aa16.64■□□□□ 0.25
LTA-213ENST00000418386 PUS3Q9BZE2 481 aaKnown RBP16.64■□□□□ 0.25
LTA-213ENST00000418386 RIPOR2Q9Y4F9 1068 aa16.64■□□□□ 0.25
LTA-213ENST00000418386 HOXA10P31260 410 aaPredicted RBP16.63■□□□□ 0.25
LTA-213ENST00000418386 IGHMBP2P38935 993 aaKnown RBP16.63■□□□□ 0.25
LTA-213ENST00000418386 LDHAL6AQ6ZMR3 332 aa16.63■□□□□ 0.25
LTA-213ENST00000418386 DDX46Q7L014 1031 aaKnown RBP16.63■□□□□ 0.25
LTA-213ENST00000418386 SALL3Q9BXA9 1300 aa16.63■□□□□ 0.25
LTA-213ENST00000418386 PDE6BP35913 854 aa16.62■□□□□ 0.25
LTA-213ENST00000418386 ANKRD18AQ8IVF6 992 aa16.62■□□□□ 0.25
LTA-213ENST00000418386 CLASRPQ8N2M8 674 aaKnown RBP16.62■□□□□ 0.25
LTA-213ENST00000418386 RPGRQ92834 1020 aaKnown RBP16.62■□□□□ 0.25
LTA-213ENST00000418386 IL1RAPL2Q9NP60 686 aa16.62■□□□□ 0.25
LTA-213ENST00000418386 GPR108Q9NPR9 543 aa16.62■□□□□ 0.25
LTA-213ENST00000418386 CNNM1Q9NRU3 951 aa16.62■□□□□ 0.25
LTA-213ENST00000418386 ZNF609O15014 1411 aa16.62■□□□□ 0.25
LTA-213ENST00000418386 RGS3P49796 1198 aa16.62■□□□□ 0.25
LTA-213ENST00000418386 TFCP2Q12800 502 aa16.62■□□□□ 0.25
LTA-213ENST00000418386 GRAPQ13588 217 aa16.62■□□□□ 0.25
LTA-213ENST00000418386 GRAPLQ8TC17 118 aaPredicted RBP16.62■□□□□ 0.25
LTA-213ENST00000418386 MPHOSPH8Q99549 860 aa16.62■□□□□ 0.25
LTA-213ENST00000418386 DLEC1Q9Y238 1755 aa16.61■□□□□ 0.25
LTA-213ENST00000418386 MROH5Q6ZUA9 1318 aa16.61■□□□□ 0.25
LTA-213ENST00000418386 ZBTB7AO95365 584 aa16.61■□□□□ 0.25
LTA-213ENST00000418386 CELF1Q92879 486 aaKnown RBP16.61■□□□□ 0.25
LTA-213ENST00000418386 BSDC1Q9NW68 430 aaPredicted RBP16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms