RNA–Protein interactions for RNA: ENST00000417717.6

SATB1-204, Transcript of SATB homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene SATB1, Length 4,589 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-204ENST00000417717 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.75□□□□□ -0.53
SATB1-204ENST00000417717 PAIP2BQ9ULR5 123 aaKnown RBP11.75□□□□□ -0.53
SATB1-204ENST00000417717 ATP10BO94823 1461 aa11.75□□□□□ -0.53
SATB1-204ENST00000417717 CHUKO15111 745 aa11.75□□□□□ -0.53
SATB1-204ENST00000417717 HNRNPH2P55795 449 aaKnown RBP11.75□□□□□ -0.53
SATB1-204ENST00000417717 BRD3Q15059 726 aa11.75□□□□□ -0.53
SATB1-204ENST00000417717 FKBP15Q5T1M5 1219 aa11.75□□□□□ -0.53
SATB1-204ENST00000417717 PHLDB3Q6NSJ2 640 aa11.74□□□□□ -0.53
SATB1-204ENST00000417717 GIMAP6Q6P9H5 292 aa11.74□□□□□ -0.53
SATB1-204ENST00000417717 HOOK3Q86VS8 718 aa11.74□□□□□ -0.53
SATB1-204ENST00000417717 ARHGAP24Q8N264 748 aa11.74□□□□□ -0.53
SATB1-204ENST00000417717 STAG1Q8WVM7 1258 aa11.74□□□□□ -0.53
SATB1-204ENST00000417717 CCDC77Q9BR77 488 aa11.74□□□□□ -0.53
SATB1-204ENST00000417717 ANAPC4Q9UJX5 808 aa11.74□□□□□ -0.53
SATB1-204ENST00000417717 SESN3P58005 492 aa11.74□□□□□ -0.53
SATB1-204ENST00000417717 TERF2Q15554 542 aa11.74□□□□□ -0.53
SATB1-204ENST00000417717 FOXD1Q16676 465 aa11.74□□□□□ -0.53
SATB1-204ENST00000417717 SMARCC2Q8TAQ2 1214 aa11.74□□□□□ -0.53
SATB1-204ENST00000417717 CIB2O75838 187 aa11.74□□□□□ -0.53
SATB1-204ENST00000417717 SLC3A2P08195 630 aaKnown RBP11.74□□□□□ -0.53
SATB1-204ENST00000417717 ATP2B1P20020 1258 aa11.74□□□□□ -0.53
SATB1-204ENST00000417717 RANBP1P43487 201 aa11.74□□□□□ -0.53
SATB1-204ENST00000417717 GNAI1P63096 354 aa11.74□□□□□ -0.53
SATB1-204ENST00000417717 CTNNBL1Q8WYA6 563 aaPredicted RBP11.74□□□□□ -0.53
SATB1-204ENST00000417717 DDX23Q9BUQ8 820 aaKnown RBP11.74□□□□□ -0.53
SATB1-204ENST00000417717 SEPT11Q9NVA2 429 aaKnown RBP11.74□□□□□ -0.53
SATB1-204ENST00000417717 A0A1W2PRG0 241 aa11.74□□□□□ -0.53
SATB1-204ENST00000417717 KRT32Q14532 448 aa11.74□□□□□ -0.53
SATB1-204ENST00000417717 ARMC9Q7Z3E5 817 aa11.74□□□□□ -0.53
SATB1-204ENST00000417717 SMC5Q8IY18 1101 aa11.74□□□□□ -0.53
SATB1-204ENST00000417717 THEGQ9P2T0 379 aa11.74□□□□□ -0.53
SATB1-204ENST00000417717 GNAI3P08754 354 aa11.73□□□□□ -0.53
SATB1-204ENST00000417717 MATR3P43243 847 aaKnown RBP eCLIP11.73□□□□□ -0.53
SATB1-204ENST00000417717 HDGFP51858 240 aaKnown RBP11.73□□□□□ -0.53
SATB1-204ENST00000417717 FERMT3Q86UX7 667 aa11.73□□□□□ -0.53
SATB1-204ENST00000417717 EXOC4Q96A65 974 aa11.73□□□□□ -0.53
SATB1-204ENST00000417717 MED4Q9NPJ6 270 aa11.73□□□□□ -0.53
SATB1-204ENST00000417717 NCOA1Q15788 1441 aa11.73□□□□□ -0.53
SATB1-204ENST00000417717 SPTY2D1Q68D10 685 aaPredicted RBP11.73□□□□□ -0.53
SATB1-204ENST00000417717 RUFY3Q7L099 469 aa11.73□□□□□ -0.53
SATB1-204ENST00000417717 RASEFQ8IZ41 740 aa11.73□□□□□ -0.53
SATB1-204ENST00000417717 DTNBP1Q96EV8 351 aa11.73□□□□□ -0.53
SATB1-204ENST00000417717 RHOXF2BP0C7M4 288 aa11.73□□□□□ -0.53
SATB1-204ENST00000417717 MUM1Q2TAK8 710 aa11.73□□□□□ -0.53
SATB1-204ENST00000417717 GPR161Q8N6U8 529 aaKnown RBP11.73□□□□□ -0.53
SATB1-204ENST00000417717 RHOXF2Q9BQY4 288 aa11.73□□□□□ -0.53
SATB1-204ENST00000417717 SYT1P21579 422 aa11.72□□□□□ -0.53
SATB1-204ENST00000417717 SART3Q15020 963 aaKnown RBP11.72□□□□□ -0.53
SATB1-204ENST00000417717 GRIPAP1Q4V328 841 aa11.72□□□□□ -0.53
SATB1-204ENST00000417717 ARMCX6Q7L4S7 300 aa11.72□□□□□ -0.53
SATB1-204ENST00000417717 ZBTB9Q96C00 473 aa11.72□□□□□ -0.53
SATB1-204ENST00000417717 FRMD3A2A2Y4 597 aa11.72□□□□□ -0.53
SATB1-204ENST00000417717 CALR3Q96L12 384 aaKnown RBP11.72□□□□□ -0.53
SATB1-204ENST00000417717 C9orf78Q9NZ63 289 aaPredicted RBP11.72□□□□□ -0.53
SATB1-204ENST00000417717 WDHD1O75717 1129 aaPredicted RBP11.72□□□□□ -0.53
SATB1-204ENST00000417717 UBASH3AP57075 661 aa11.72□□□□□ -0.53
SATB1-204ENST00000417717 CPLX3Q8WVH0 158 aa11.72□□□□□ -0.53
SATB1-204ENST00000417717 MPHOSPH8Q99549 860 aa11.72□□□□□ -0.53
SATB1-204ENST00000417717 FSD1Q9BTV5 496 aa11.72□□□□□ -0.53
SATB1-204ENST00000417717 CYLC1P35663 651 aaPredicted RBP11.72□□□□□ -0.53
SATB1-204ENST00000417717 ANO6Q4KMQ2 910 aa11.72□□□□□ -0.53
SATB1-204ENST00000417717 KIAA1524Q8TCG1 905 aa11.72□□□□□ -0.53
SATB1-204ENST00000417717 RBSNQ9H1K0 784 aa11.72□□□□□ -0.53
SATB1-204ENST00000417717 GDPD2Q9HCC8 539 aa11.72□□□□□ -0.53
SATB1-204ENST00000417717 SERPINA10Q9UK55 444 aa11.72□□□□□ -0.53
SATB1-204ENST00000417717 PPP1R12AO14974 1030 aaPredicted RBP11.71□□□□□ -0.53
SATB1-204ENST00000417717 STX6O43752 255 aa11.71□□□□□ -0.53
SATB1-204ENST00000417717 CHMP4BP1P59074 171 aa11.71□□□□□ -0.53
SATB1-204ENST00000417717 BCAS4Q8TDM0 211 aa11.71□□□□□ -0.53
SATB1-204ENST00000417717 SELENOSQ9BQE4 189 aa11.71□□□□□ -0.53
SATB1-204ENST00000417717 ADAMTS8Q9UP79 889 aa11.71□□□□□ -0.53
SATB1-204ENST00000417717 TRIM35Q9UPQ4 493 aa11.71□□□□□ -0.53
SATB1-204ENST00000417717 CDKL5O76039 1030 aa11.71□□□□□ -0.53
SATB1-204ENST00000417717 RASSF2P50749 326 aa11.71□□□□□ -0.53
SATB1-204ENST00000417717 IFI16Q16666 785 aaKnown RBP11.71□□□□□ -0.53
SATB1-204ENST00000417717 HOMER2Q9NSB8 354 aa11.71□□□□□ -0.53
SATB1-204ENST00000417717 GOLGA6BA6NDN3 693 aa11.71□□□□□ -0.54
SATB1-204ENST00000417717 BCAR3O75815 825 aa11.71□□□□□ -0.54
SATB1-204ENST00000417717 MAP4K4O95819 1239 aaPredicted RBP11.71□□□□□ -0.54
SATB1-204ENST00000417717 PSMD2Q13200 908 aa11.71□□□□□ -0.54
SATB1-204ENST00000417717 RUFY4Q6ZNE9 571 aa11.71□□□□□ -0.54
SATB1-204ENST00000417717 ABTB1Q969K4 478 aaPredicted RBP11.71□□□□□ -0.54
SATB1-204ENST00000417717 FAN1Q9Y2M0 1017 aa11.71□□□□□ -0.54
SATB1-204ENST00000417717 CROCCP2Q86T23 111 aa11.7□□□□□ -0.54
SATB1-204ENST00000417717 TRIM22Q8IYM9 498 aa11.7□□□□□ -0.54
SATB1-204ENST00000417717 SHANK2Q9UPX8 1470 aa11.7□□□□□ -0.54
SATB1-204ENST00000417717 RWDD2BP57060 319 aa11.7□□□□□ -0.54
SATB1-204ENST00000417717 KIAA0753Q2KHM9 967 aa11.7□□□□□ -0.54
SATB1-204ENST00000417717 SOGA3Q5TF21 947 aa11.7□□□□□ -0.54
SATB1-204ENST00000417717 WDR78Q5VTH9 848 aa11.7□□□□□ -0.54
SATB1-204ENST00000417717 CCDC170Q8IYT3 715 aa11.7□□□□□ -0.54
SATB1-204ENST00000417717 PUF60Q9UHX1 559 aaKnown RBP11.7□□□□□ -0.54
SATB1-204ENST00000417717 ARHGEF11O15085 1522 aa11.7□□□□□ -0.54
SATB1-204ENST00000417717 CEP170Q5SW79 1584 aa11.7□□□□□ -0.54
SATB1-204ENST00000417717 RPSAP08865 295 aaKnown RBP11.7□□□□□ -0.54
SATB1-204ENST00000417717 FAM71BQ8TC56 605 aa11.7□□□□□ -0.54
SATB1-204ENST00000417717 TSC1Q92574 1164 aa11.7□□□□□ -0.54
SATB1-204ENST00000417717 CARD6Q9BX69 1037 aa11.7□□□□□ -0.54
SATB1-204ENST00000417717 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.7□□□□□ -0.54
SATB1-204ENST00000417717 VIMP08670 466 aaKnown RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms