RNA–Protein interactions for RNA: ENST00000417504.5

PTPA-211, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 4

Gene PTPA, Length 567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-211ENST00000417504 CCDC30Q5VVM6 783 aa10.37□□□□□ -0.75
PTPA-211ENST00000417504 NECTIN2Q92692 538 aa10.37□□□□□ -0.75
PTPA-211ENST00000417504 BCL2L13Q9BXK5 485 aa10.37□□□□□ -0.75
PTPA-211ENST00000417504 MYH14Q7Z406 1995 aaKnown RBP10.37□□□□□ -0.75
PTPA-211ENST00000417504 ANKRD36CQ5JPF3 1778 aa10.37□□□□□ -0.75
PTPA-211ENST00000417504 KIF16BQ96L93 1317 aa10.36□□□□□ -0.75
PTPA-211ENST00000417504 NUP188Q5SRE5 1749 aa10.36□□□□□ -0.75
PTPA-211ENST00000417504 TUBGCP6Q96RT7 1819 aa10.36□□□□□ -0.75
PTPA-211ENST00000417504 RCCD1A6NED2 376 aa10.36□□□□□ -0.75
PTPA-211ENST00000417504 GIGYF1O75420 1035 aaPredicted RBP10.36□□□□□ -0.75
PTPA-211ENST00000417504 ALDH1L2Q3SY69 923 aa10.36□□□□□ -0.75
PTPA-211ENST00000417504 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.36□□□□□ -0.75
PTPA-211ENST00000417504 BCORQ6W2J9 1755 aa10.36□□□□□ -0.75
PTPA-211ENST00000417504 UBR3Q6ZT12 1888 aa10.36□□□□□ -0.75
PTPA-211ENST00000417504 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.35□□□□□ -0.75
PTPA-211ENST00000417504 LOC102724428A0A0B4J2F2 783 aa10.35□□□□□ -0.75
PTPA-211ENST00000417504 VAMP4O75379 141 aa10.35□□□□□ -0.75
PTPA-211ENST00000417504 DNAJB2P25686 324 aa10.35□□□□□ -0.75
PTPA-211ENST00000417504 ATP6V1AP38606 617 aa10.35□□□□□ -0.75
PTPA-211ENST00000417504 RARSP54136 660 aaKnown RBP10.35□□□□□ -0.75
PTPA-211ENST00000417504 SIK1P57059 783 aa10.35□□□□□ -0.75
PTPA-211ENST00000417504 TEX13AQ9BXU3 409 aaPredicted RBP10.35□□□□□ -0.75
PTPA-211ENST00000417504 C4AP0C0L4 1744 aa10.35□□□□□ -0.75
PTPA-211ENST00000417504 PRAMEF22A3QJZ6 481 aa10.34□□□□□ -0.75
PTPA-211ENST00000417504 TCERG1O14776 1098 aaKnown RBP10.34□□□□□ -0.75
PTPA-211ENST00000417504 STARD3NLO95772 234 aa10.34□□□□□ -0.75
PTPA-211ENST00000417504 PTF1AQ7RTS3 328 aa10.34□□□□□ -0.75
PTPA-211ENST00000417504 CAMKK2Q96RR4 588 aa10.34□□□□□ -0.75
PTPA-211ENST00000417504 CCNL1Q9UK58 526 aaPredicted RBP10.34□□□□□ -0.75
PTPA-211ENST00000417504 SCN7AQ01118 1682 aa10.34□□□□□ -0.75
PTPA-211ENST00000417504 ERBB4Q15303 1308 aa10.33□□□□□ -0.76
PTPA-211ENST00000417504 NUP98P52948 1817 aa10.33□□□□□ -0.76
PTPA-211ENST00000417504 GOLGA8CPA6NN73 597 aa10.33□□□□□ -0.76
PTPA-211ENST00000417504 APBA3O96018 575 aa10.33□□□□□ -0.76
PTPA-211ENST00000417504 NEFLP07196 543 aa10.33□□□□□ -0.76
PTPA-211ENST00000417504 NPM2Q86SE8 214 aaKnown RBP10.33□□□□□ -0.76
PTPA-211ENST00000417504 DNAJC10Q8IXB1 793 aa10.33□□□□□ -0.76
PTPA-211ENST00000417504 NLRP7Q8WX94 980 aa10.33□□□□□ -0.76
PTPA-211ENST00000417504 SSH1Q8WYL5 1049 aa10.33□□□□□ -0.76
PTPA-211ENST00000417504 FRAT1Q92837 279 aaPredicted RBP10.33□□□□□ -0.76
PTPA-211ENST00000417504 ZFRQ96KR1 1074 aaKnown RBP10.33□□□□□ -0.76
PTPA-211ENST00000417504 CHPF2Q9P2E5 772 aa10.33□□□□□ -0.76
PTPA-211ENST00000417504 DBF4Q9UBU7 674 aaPredicted RBP10.33□□□□□ -0.76
PTPA-211ENST00000417504 QSER1Q2KHR3 1735 aa10.33□□□□□ -0.76
PTPA-211ENST00000417504 BCAR3O75815 825 aa10.32□□□□□ -0.76
PTPA-211ENST00000417504 MYL6BP14649 208 aa10.32□□□□□ -0.76
PTPA-211ENST00000417504 YY1P25490 414 aa10.32□□□□□ -0.76
PTPA-211ENST00000417504 HMGB2P26583 209 aaKnown RBP10.32□□□□□ -0.76
PTPA-211ENST00000417504 RRP1P56182 461 aaKnown RBP10.32□□□□□ -0.76
PTPA-211ENST00000417504 AMHR2Q16671 573 aa10.32□□□□□ -0.76
PTPA-211ENST00000417504 ZNF330Q9Y3S2 320 aaPredicted RBP10.32□□□□□ -0.76
PTPA-211ENST00000417504 IPO8O15397 1037 aaKnown RBP10.31□□□□□ -0.76
PTPA-211ENST00000417504 SLC27A3Q5K4L6 730 aa10.31□□□□□ -0.76
PTPA-211ENST00000417504 SPNS2Q8IVW8 549 aa10.31□□□□□ -0.76
PTPA-211ENST00000417504 FTSJ3Q8IY81 847 aaKnown RBP10.31□□□□□ -0.76
PTPA-211ENST00000417504 TMEM134Q9H6X4 195 aa10.31□□□□□ -0.76
PTPA-211ENST00000417504 HYPKQ9NX55 129 aa10.31□□□□□ -0.76
PTPA-211ENST00000417504 SUPT16HQ9Y5B9 1047 aaKnown RBP10.31□□□□□ -0.76
PTPA-211ENST00000417504 USP16Q9Y5T5 823 aa10.31□□□□□ -0.76
PTPA-211ENST00000417504 PTPRCP08575 1304 aa10.31□□□□□ -0.76
PTPA-211ENST00000417504 PXDNLA1KZ92 1463 aa10.3□□□□□ -0.76
PTPA-211ENST00000417504 CRKLP46109 303 aaKnown RBP10.3□□□□□ -0.76
PTPA-211ENST00000417504 MDM2Q00987 491 aaPredicted RBP10.3□□□□□ -0.76
PTPA-211ENST00000417504 PDE4DQ08499 809 aa10.3□□□□□ -0.76
PTPA-211ENST00000417504 FLIIQ13045 1269 aa10.3□□□□□ -0.76
PTPA-211ENST00000417504 FKBP5Q13451 457 aaPredicted RBP10.3□□□□□ -0.76
PTPA-211ENST00000417504 ITPK1Q13572 414 aa10.3□□□□□ -0.76
PTPA-211ENST00000417504 ZKSCAN2Q63HK3 967 aa10.3□□□□□ -0.76
PTPA-211ENST00000417504 SLC4A9Q96Q91 983 aa10.3□□□□□ -0.76
PTPA-211ENST00000417504 DDX21Q9NR30 783 aaKnown RBP eCLIP10.3□□□□□ -0.76
PTPA-211ENST00000417504 CCDC87Q9NVE4 849 aa10.3□□□□□ -0.76
PTPA-211ENST00000417504 CNTNAP4Q9C0A0 1308 aa10.3□□□□□ -0.76
PTPA-211ENST00000417504 DDX58O95786 925 aaKnown RBP10.29□□□□□ -0.76
PTPA-211ENST00000417504 ANXA1P04083 346 aa10.29□□□□□ -0.76
PTPA-211ENST00000417504 CYP19A1P11511 503 aaPredicted RBP10.29□□□□□ -0.76
PTPA-211ENST00000417504 MS4A1P11836 297 aa10.29□□□□□ -0.76
PTPA-211ENST00000417504 PIP4K2AP48426 406 aaPredicted RBP10.29□□□□□ -0.76
PTPA-211ENST00000417504 KCNQ4P56696 695 aa10.29□□□□□ -0.76
PTPA-211ENST00000417504 PROSER3Q2NL68 480 aa10.29□□□□□ -0.76
PTPA-211ENST00000417504 SWT1Q5T5J6 900 aaKnown RBP10.29□□□□□ -0.76
PTPA-211ENST00000417504 NBPF14Q5TI25 921 aa10.29□□□□□ -0.76
PTPA-211ENST00000417504 KIF6Q6ZMV9 814 aa10.29□□□□□ -0.76
PTPA-211ENST00000417504 SAMD7Q7Z3H4 446 aa10.29□□□□□ -0.76
PTPA-211ENST00000417504 LINC00116Q8NCU8 138 aa10.29□□□□□ -0.76
PTPA-211ENST00000417504 API5Q9BZZ5 524 aaKnown RBP10.29□□□□□ -0.76
PTPA-211ENST00000417504 NOB1Q9ULX3 412 aaKnown RBP10.29□□□□□ -0.76
PTPA-211ENST00000417504 ZBTB1Q9Y2K1 713 aa10.29□□□□□ -0.76
PTPA-211ENST00000417504 COL15A1P39059 1388 aa10.28□□□□□ -0.76
PTPA-211ENST00000417504 PLSCR1O15162 318 aa10.28□□□□□ -0.76
PTPA-211ENST00000417504 PLIN1O60240 522 aa10.28□□□□□ -0.76
PTPA-211ENST00000417504 A1BGP04217 495 aa10.28□□□□□ -0.76
PTPA-211ENST00000417504 CLCN1P35523 988 aa10.28□□□□□ -0.76
PTPA-211ENST00000417504 BRPF1P55201 1214 aaPredicted RBP10.28□□□□□ -0.76
PTPA-211ENST00000417504 AIMP1Q12904 312 aaKnown RBP10.28□□□□□ -0.76
PTPA-211ENST00000417504 TXNRD1Q16881 649 aa10.28□□□□□ -0.76
PTPA-211ENST00000417504 ANKK1Q8NFD2 765 aa10.28□□□□□ -0.76
PTPA-211ENST00000417504 WNT2BQ93097 391 aa10.28□□□□□ -0.76
PTPA-211ENST00000417504 GPCPD1Q9NPB8 672 aa10.28□□□□□ -0.76
PTPA-211ENST00000417504 DAXXQ9UER7 740 aaPredicted RBP10.28□□□□□ -0.76
PTPA-211ENST00000417504 MYH3P11055 1940 aa10.27□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms