RNA–Protein interactions for RNA: ENST00000417432.1

CNOT4P1-201, Transcript of CCR4-NOT transcription complex subunit 4 pseudogene 1, humanhuman

BASIC

Gene CNOT4P1, Length 1,199 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4P1-201ENST00000417432 SLC10A5Q5PT55 438 aa11.43□□□□□ -0.58
CNOT4P1-201ENST00000417432 DDX46Q7L014 1031 aaKnown RBP11.43□□□□□ -0.58
CNOT4P1-201ENST00000417432 ZNF428Q96B54 188 aa11.43□□□□□ -0.58
CNOT4P1-201ENST00000417432 ABT1Q9ULW3 272 aaKnown RBP11.43□□□□□ -0.58
CNOT4P1-201ENST00000417432 TRIM35Q9UPQ4 493 aa11.43□□□□□ -0.58
CNOT4P1-201ENST00000417432 PSME4Q14997 1843 aa11.43□□□□□ -0.58
CNOT4P1-201ENST00000417432 COL4A1P02462 1669 aa11.43□□□□□ -0.58
CNOT4P1-201ENST00000417432 HOXB7P09629 217 aa11.42□□□□□ -0.58
CNOT4P1-201ENST00000417432 VEGFBP49765 207 aa11.42□□□□□ -0.58
CNOT4P1-201ENST00000417432 GRAPQ13588 217 aa11.42□□□□□ -0.58
CNOT4P1-201ENST00000417432 MPNDQ8N594 471 aa11.42□□□□□ -0.58
CNOT4P1-201ENST00000417432 GRAPLQ8TC17 118 aaPredicted RBP11.42□□□□□ -0.58
CNOT4P1-201ENST00000417432 POLR2AP24928 1970 aaKnown RBP11.41□□□□□ -0.58
CNOT4P1-201ENST00000417432 SCN9AQ15858 1988 aa11.41□□□□□ -0.58
CNOT4P1-201ENST00000417432 FOXN1O15353 648 aa11.41□□□□□ -0.58
CNOT4P1-201ENST00000417432 PAXIP1Q6ZW49 1069 aaPredicted RBP11.41□□□□□ -0.58
CNOT4P1-201ENST00000417432 USP50Q70EL3 339 aaPredicted RBP11.41□□□□□ -0.58
CNOT4P1-201ENST00000417432 PLBD2Q8NHP8 589 aa11.41□□□□□ -0.58
CNOT4P1-201ENST00000417432 VPS33BQ9H267 617 aa11.41□□□□□ -0.58
CNOT4P1-201ENST00000417432 GPRC5DQ9NZD1 345 aa11.41□□□□□ -0.58
CNOT4P1-201ENST00000417432 DBF4Q9UBU7 674 aaPredicted RBP11.41□□□□□ -0.58
CNOT4P1-201ENST00000417432 ADAMTS8Q9UP79 889 aa11.41□□□□□ -0.58
CNOT4P1-201ENST00000417432 CDHR2Q9BYE9 1310 aa11.4□□□□□ -0.58
CNOT4P1-201ENST00000417432 RASSF10A6NK89 507 aa11.4□□□□□ -0.58
CNOT4P1-201ENST00000417432 BBOX1O75936 387 aa11.4□□□□□ -0.58
CNOT4P1-201ENST00000417432 GMPSP49915 693 aaPredicted RBP11.4□□□□□ -0.58
CNOT4P1-201ENST00000417432 KIAA2012Q0VF49 1180 aa11.4□□□□□ -0.58
CNOT4P1-201ENST00000417432 TMC4Q7Z404 712 aa11.4□□□□□ -0.58
CNOT4P1-201ENST00000417432 SP8Q8IXZ3 490 aa11.4□□□□□ -0.58
CNOT4P1-201ENST00000417432 RTFDC1Q9BY42 306 aaPredicted RBP11.4□□□□□ -0.58
CNOT4P1-201ENST00000417432 MBIPQ9NS73 344 aa11.4□□□□□ -0.58
CNOT4P1-201ENST00000417432 ZNRF3Q9ULT6 936 aa11.4□□□□□ -0.58
CNOT4P1-201ENST00000417432 ATP5J2-PTCD1G3V325 749 aa11.39□□□□□ -0.59
CNOT4P1-201ENST00000417432 CTCFP49711 727 aaPredicted RBP11.39□□□□□ -0.59
CNOT4P1-201ENST00000417432 CXCL9Q07325 125 aa11.39□□□□□ -0.59
CNOT4P1-201ENST00000417432 GOLGA2Q08379 1002 aa11.39□□□□□ -0.59
CNOT4P1-201ENST00000417432 GRM1Q13255 1194 aa11.39□□□□□ -0.59
CNOT4P1-201ENST00000417432 DEFB115Q30KQ5 88 aa11.39□□□□□ -0.59
CNOT4P1-201ENST00000417432 DUSP27Q5VZP5 1158 aa11.39□□□□□ -0.59
CNOT4P1-201ENST00000417432 CIAPIN1Q6FI81 312 aa11.39□□□□□ -0.59
CNOT4P1-201ENST00000417432 ANKRD13DQ6ZTN6 518 aa11.39□□□□□ -0.59
CNOT4P1-201ENST00000417432 CFAP44Q96MT7 982 aa11.39□□□□□ -0.59
CNOT4P1-201ENST00000417432 BCL2L13Q9BXK5 485 aa11.39□□□□□ -0.59
CNOT4P1-201ENST00000417432 ADARB2Q9NS39 739 aaKnown RBP11.39□□□□□ -0.59
CNOT4P1-201ENST00000417432 HYPKQ9NX55 129 aa11.39□□□□□ -0.59
CNOT4P1-201ENST00000417432 CACNA1FO60840 1977 aa11.39□□□□□ -0.59
CNOT4P1-201ENST00000417432 TRAF5O00463 557 aa11.38□□□□□ -0.59
CNOT4P1-201ENST00000417432 RAD17O75943 681 aa11.38□□□□□ -0.59
CNOT4P1-201ENST00000417432 FMR1Q06787 632 aaKnown RBP eCLIP11.38□□□□□ -0.59
CNOT4P1-201ENST00000417432 TNIP1Q15025 636 aa11.38□□□□□ -0.59
CNOT4P1-201ENST00000417432 RTL5Q5HYW3 569 aaPredicted RBP11.38□□□□□ -0.59
CNOT4P1-201ENST00000417432 FAM89AQ96GI7 184 aa11.38□□□□□ -0.59
CNOT4P1-201ENST00000417432 ISCA1Q9BUE6 129 aa11.38□□□□□ -0.59
CNOT4P1-201ENST00000417432 PRKRIP1Q9H875 184 aaPredicted RBP11.38□□□□□ -0.59
CNOT4P1-201ENST00000417432 WDR33Q9C0J8 1336 aaKnown RBP11.37□□□□□ -0.59
CNOT4P1-201ENST00000417432 CALD1Q05682 793 aaKnown RBP11.37□□□□□ -0.59
CNOT4P1-201ENST00000417432 IFT57Q9NWB7 429 aa11.37□□□□□ -0.59
CNOT4P1-201ENST00000417432 IRS4O14654 1257 aaPredicted RBP11.36□□□□□ -0.59
CNOT4P1-201ENST00000417432 APAF1O14727 1248 aa11.36□□□□□ -0.59
CNOT4P1-201ENST00000417432 ECE1P42892 770 aa11.36□□□□□ -0.59
CNOT4P1-201ENST00000417432 GNAI1P63096 354 aa11.36□□□□□ -0.59
CNOT4P1-201ENST00000417432 RIC3Q7Z5B4 369 aa11.36□□□□□ -0.59
CNOT4P1-201ENST00000417432 CELF1Q92879 486 aaKnown RBP11.36□□□□□ -0.59
CNOT4P1-201ENST00000417432 CAPNS2Q96L46 248 aa11.36□□□□□ -0.59
CNOT4P1-201ENST00000417432 PRDM10Q9NQV6 1147 aa11.36□□□□□ -0.59
CNOT4P1-201ENST00000417432 WBP1LQ9NX94 342 aa11.36□□□□□ -0.59
CNOT4P1-201ENST00000417432 YDJCA8MPS7 323 aa11.35□□□□□ -0.59
CNOT4P1-201ENST00000417432 C6orf229H3BNL8 230 aa11.35□□□□□ -0.59
CNOT4P1-201ENST00000417432 CELF2O95319 508 aaKnown RBP11.35□□□□□ -0.59
CNOT4P1-201ENST00000417432 LBX1P52954 281 aa11.35□□□□□ -0.59
CNOT4P1-201ENST00000417432 MAP2K1Q02750 393 aaPredicted RBP11.35□□□□□ -0.59
CNOT4P1-201ENST00000417432 SF3B3Q15393 1217 aaKnown RBP11.35□□□□□ -0.59
CNOT4P1-201ENST00000417432 WASHC4Q2M389 1173 aa11.35□□□□□ -0.59
CNOT4P1-201ENST00000417432 MICALL2Q8IY33 904 aa11.35□□□□□ -0.59
CNOT4P1-201ENST00000417432 TRPM4Q8TD43 1214 aa11.35□□□□□ -0.59
CNOT4P1-201ENST00000417432 GLIS2Q9BZE0 524 aaPredicted RBP11.35□□□□□ -0.59
CNOT4P1-201ENST00000417432 ZNF408Q9H9D4 720 aa11.35□□□□□ -0.59
CNOT4P1-201ENST00000417432 DBNDD1Q9H9R9 158 aa11.35□□□□□ -0.59
CNOT4P1-201ENST00000417432 NSFL1CQ9UNZ2 370 aaKnown RBP11.35□□□□□ -0.59
CNOT4P1-201ENST00000417432 CASP8AP2Q9UKL3 1982 aa11.35□□□□□ -0.59
CNOT4P1-201ENST00000417432 AKAP11Q9UKA4 1901 aa11.35□□□□□ -0.59
CNOT4P1-201ENST00000417432 ZNF646O15015 1829 aaPredicted RBP11.35□□□□□ -0.59
CNOT4P1-201ENST00000417432 ELL2O00472 640 aaPredicted RBP11.34□□□□□ -0.59
CNOT4P1-201ENST00000417432 ZNF853P0CG23 659 aa11.34□□□□□ -0.59
CNOT4P1-201ENST00000417432 HSPA8P11142 646 aaKnown RBP11.34□□□□□ -0.59
CNOT4P1-201ENST00000417432 HSP90B1P14625 803 aaKnown RBP11.34□□□□□ -0.59
CNOT4P1-201ENST00000417432 GPSM2P81274 684 aa11.34□□□□□ -0.59
CNOT4P1-201ENST00000417432 CYP4F22Q6NT55 531 aa11.34□□□□□ -0.59
CNOT4P1-201ENST00000417432 EYA3Q99504 573 aa11.34□□□□□ -0.59
CNOT4P1-201ENST00000417432 MYD88Q99836 296 aa11.34□□□□□ -0.59
CNOT4P1-201ENST00000417432 BEGAINQ9BUH8 593 aa11.34□□□□□ -0.59
CNOT4P1-201ENST00000417432 PHAXQ9H814 394 aaKnown RBP11.34□□□□□ -0.59
CNOT4P1-201ENST00000417432 TLL2Q9Y6L7 1015 aa11.34□□□□□ -0.59
CNOT4P1-201ENST00000417432 A0A1B0GUL6 1792 aa11.33□□□□□ -0.59
CNOT4P1-201ENST00000417432 SHTN1A0MZ66 631 aa11.33□□□□□ -0.6
CNOT4P1-201ENST00000417432 H7C1D1 291 aa11.33□□□□□ -0.6
CNOT4P1-201ENST00000417432 PSMD14O00487 310 aa11.33□□□□□ -0.6
CNOT4P1-201ENST00000417432 RIMBP2O15034 1052 aa11.33□□□□□ -0.6
CNOT4P1-201ENST00000417432 ECE2O60344 883 aa11.33□□□□□ -0.6
CNOT4P1-201ENST00000417432 TRIM28Q13263 835 aaKnown RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms