RNA–Protein interactions for RNA: ENST00000417268.3

SCAF8-203, Transcript of SR-related CTD associated factor 8, humanhuman

TSL 2 BASIC

Gene SCAF8, Length 4,944 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-203ENST00000417268 RUFY1Q96T51 708 aa14.99□□□□□ -0.01
SCAF8-203ENST00000417268 ZNF213O14771 459 aa14.98□□□□□ -0.01
SCAF8-203ENST00000417268 ZNF396Q96N95 335 aaPredicted RBP14.98□□□□□ -0.01
SCAF8-203ENST00000417268 CLTCQ00610 1675 aaKnown RBP14.98□□□□□ -0.01
SCAF8-203ENST00000417268 DCTPP1Q9H773 170 aa14.98□□□□□ -0.01
SCAF8-203ENST00000417268 ZFYP08048 801 aaPredicted RBP14.98□□□□□ -0.01
SCAF8-203ENST00000417268 PDIA4P13667 645 aaKnown RBP14.98□□□□□ -0.01
SCAF8-203ENST00000417268 C8orf34Q49A92 452 aa14.98□□□□□ -0.01
SCAF8-203ENST00000417268 SOGA3Q5TF21 947 aa14.98□□□□□ -0.01
SCAF8-203ENST00000417268 PDE1AP54750 535 aa14.97□□□□□ -0.01
SCAF8-203ENST00000417268 CEBPZQ03701 1054 aaKnown RBP14.97□□□□□ -0.01
SCAF8-203ENST00000417268 KIDINS220Q9ULH0 1771 aa14.97□□□□□ -0.01
SCAF8-203ENST00000417268 KRT85P78386 507 aa14.97□□□□□ -0.01
SCAF8-203ENST00000417268 PCMTD1Q96MG8 357 aaPredicted RBP14.97□□□□□ -0.01
SCAF8-203ENST00000417268 PA2G4Q9UQ80 394 aaKnown RBP14.97□□□□□ -0.01
SCAF8-203ENST00000417268 PPRC1Q5VV67 1664 aaKnown RBP14.97□□□□□ -0.01
SCAF8-203ENST00000417268 CCP110O43303 1012 aa14.97□□□□□ -0.01
SCAF8-203ENST00000417268 GIGYF1O75420 1035 aaPredicted RBP14.97□□□□□ -0.01
SCAF8-203ENST00000417268 MCM5P33992 734 aa14.97□□□□□ -0.01
SCAF8-203ENST00000417268 LARP1BQ659C4 914 aaKnown RBP14.97□□□□□ -0.01
SCAF8-203ENST00000417268 PPP4R3BQ5MIZ7 849 aa14.97□□□□□ -0.01
SCAF8-203ENST00000417268 OLFM4Q6UX06 510 aa14.97□□□□□ -0.01
SCAF8-203ENST00000417268 ZGPATQ8N5A5 531 aaKnown RBP14.97□□□□□ -0.01
SCAF8-203ENST00000417268 USP19O94966 1318 aa14.96□□□□□ -0.01
SCAF8-203ENST00000417268 FILIP1Q7Z7B0 1213 aa14.96□□□□□ -0.01
SCAF8-203ENST00000417268 IQCA1Q86XH1 822 aa14.96□□□□□ -0.01
SCAF8-203ENST00000417268 JMYQ8N9B5 988 aa14.96□□□□□ -0.01
SCAF8-203ENST00000417268 CNBD1Q8NA66 436 aa14.96□□□□□ -0.01
SCAF8-203ENST00000417268 QTRT2Q9H974 415 aaKnown RBP14.96□□□□□ -0.01
SCAF8-203ENST00000417268 FAM89AQ96GI7 184 aa14.96□□□□□ -0.01
SCAF8-203ENST00000417268 UPF3BQ9BZI7 483 aaKnown RBP14.96□□□□□ -0.01
SCAF8-203ENST00000417268 TSHZ3Q63HK5 1081 aa14.96□□□□□ -0.01
SCAF8-203ENST00000417268 RRAGDQ9NQL2 400 aaPredicted RBP14.96□□□□□ -0.01
SCAF8-203ENST00000417268 USP25Q9UHP3 1055 aa14.96□□□□□ -0.01
SCAF8-203ENST00000417268 ZBTB7BO15156 539 aaPredicted RBP14.96□□□□□ -0.02
SCAF8-203ENST00000417268 SKIDA1Q1XH10 827 aa14.96□□□□□ -0.02
SCAF8-203ENST00000417268 TTLL5Q6EMB2 1281 aa14.96□□□□□ -0.02
SCAF8-203ENST00000417268 ZNF444Q8N0Y2 327 aaPredicted RBP14.96□□□□□ -0.02
SCAF8-203ENST00000417268 ERCC4Q92889 916 aaPredicted RBP14.96□□□□□ -0.02
SCAF8-203ENST00000417268 PLEKHF1Q96S99 279 aa14.96□□□□□ -0.02
SCAF8-203ENST00000417268 TRPM1Q7Z4N2 1603 aa14.95□□□□□ -0.02
SCAF8-203ENST00000417268 BAG4O95429 457 aaKnown RBP14.95□□□□□ -0.02
SCAF8-203ENST00000417268 KLHL40Q2TBA0 621 aa14.95□□□□□ -0.02
SCAF8-203ENST00000417268 WASF1Q92558 559 aa14.95□□□□□ -0.02
SCAF8-203ENST00000417268 BICC1Q9H694 974 aaKnown RBP14.95□□□□□ -0.02
SCAF8-203ENST00000417268 GSTO1P78417 241 aa14.95□□□□□ -0.02
SCAF8-203ENST00000417268 STK38Q15208 465 aa14.95□□□□□ -0.02
SCAF8-203ENST00000417268 TBC1D9Q6ZT07 1266 aa14.95□□□□□ -0.02
SCAF8-203ENST00000417268 ERBB4Q15303 1308 aa14.95□□□□□ -0.02
SCAF8-203ENST00000417268 ANKRD2Q9GZV1 360 aa14.95□□□□□ -0.02
SCAF8-203ENST00000417268 ZC3H12CQ9C0D7 883 aaKnown RBP14.95□□□□□ -0.02
SCAF8-203ENST00000417268 NUP62CLQ9H1M0 184 aa14.95□□□□□ -0.02
SCAF8-203ENST00000417268 CCDC196A0A1B0GTZ2 297 aa14.94□□□□□ -0.02
SCAF8-203ENST00000417268 APBA3O96018 575 aa14.94□□□□□ -0.02
SCAF8-203ENST00000417268 ZNF772Q68DY9 489 aaPredicted RBP14.94□□□□□ -0.02
SCAF8-203ENST00000417268 SPDYE4A6NLX3 237 aa14.94□□□□□ -0.02
SCAF8-203ENST00000417268 MPHOSPH10O00566 681 aaKnown RBP14.94□□□□□ -0.02
SCAF8-203ENST00000417268 NSFL1CQ9UNZ2 370 aaKnown RBP14.94□□□□□ -0.02
SCAF8-203ENST00000417268 TXLNAP40222 546 aa14.94□□□□□ -0.02
SCAF8-203ENST00000417268 CDK12Q9NYV4 1490 aaPredicted RBP14.94□□□□□ -0.02
SCAF8-203ENST00000417268 RANBP6O60518 1105 aaKnown RBP14.94□□□□□ -0.02
SCAF8-203ENST00000417268 TTC41PQ6P2S7 1318 aa14.93□□□□□ -0.02
SCAF8-203ENST00000417268 BAG6P46379 1132 aa14.93□□□□□ -0.02
SCAF8-203ENST00000417268 ZNF804AQ7Z570 1209 aa14.93□□□□□ -0.02
SCAF8-203ENST00000417268 PDE8AO60658 829 aa14.93□□□□□ -0.02
SCAF8-203ENST00000417268 SDSP20132 328 aa14.93□□□□□ -0.02
SCAF8-203ENST00000417268 SMC5Q8IY18 1101 aa14.93□□□□□ -0.02
SCAF8-203ENST00000417268 FAM177A1Q8N128 213 aaPredicted RBP14.92□□□□□ -0.02
SCAF8-203ENST00000417268 SH2B1Q9NRF2 756 aaPredicted RBP14.92□□□□□ -0.02
SCAF8-203ENST00000417268 NOL7Q9UMY1 257 aaKnown RBP14.92□□□□□ -0.02
SCAF8-203ENST00000417268 SETBP1Q9Y6X0 1596 aa14.92□□□□□ -0.02
SCAF8-203ENST00000417268 KCNQ3O43525 872 aa14.92□□□□□ -0.02
SCAF8-203ENST00000417268 CRNKL1Q9BZJ0 848 aaKnown RBP14.92□□□□□ -0.02
SCAF8-203ENST00000417268 USP16Q9Y5T5 823 aa14.92□□□□□ -0.02
SCAF8-203ENST00000417268 MADDQ8WXG6 1647 aa14.92□□□□□ -0.02
SCAF8-203ENST00000417268 GCKRQ14397 625 aa14.92□□□□□ -0.02
SCAF8-203ENST00000417268 UNC5CLQ8IV45 518 aa14.91□□□□□ -0.02
SCAF8-203ENST00000417268 CTCFLQ8NI51 663 aaPredicted RBP14.91□□□□□ -0.02
SCAF8-203ENST00000417268 HMG20BQ9P0W2 317 aa14.91□□□□□ -0.02
SCAF8-203ENST00000417268 RBM27Q9P2N5 1060 aaKnown RBP14.91□□□□□ -0.02
SCAF8-203ENST00000417268 TULP4Q9NRJ4 1543 aa14.91□□□□□ -0.02
SCAF8-203ENST00000417268 PTPRMP28827 1452 aa14.91□□□□□ -0.02
SCAF8-203ENST00000417268 PTCH1Q13635 1447 aa14.91□□□□□ -0.02
SCAF8-203ENST00000417268 RDXP35241 583 aaKnown RBP14.91□□□□□ -0.02
SCAF8-203ENST00000417268 IQSEC3Q9UPP2 1182 aaPredicted RBP14.91□□□□□ -0.02
SCAF8-203ENST00000417268 EYA2O00167 538 aa14.91□□□□□ -0.02
SCAF8-203ENST00000417268 MAP3K11Q16584 847 aa14.91□□□□□ -0.02
SCAF8-203ENST00000417268 CCDC183Q5T5S1 534 aa14.91□□□□□ -0.02
SCAF8-203ENST00000417268 HELBQ8NG08 1087 aaPredicted RBP14.91□□□□□ -0.02
SCAF8-203ENST00000417268 UBXN4Q92575 508 aa14.91□□□□□ -0.02
SCAF8-203ENST00000417268 RBM17Q96I25 401 aaKnown RBP14.91□□□□□ -0.02
SCAF8-203ENST00000417268 TRERF1Q96PN7 1200 aa14.91□□□□□ -0.02
SCAF8-203ENST00000417268 EYA3Q99504 573 aa14.91□□□□□ -0.02
SCAF8-203ENST00000417268 ZC3H13Q5T200 1668 aaKnown RBP14.91□□□□□ -0.02
SCAF8-203ENST00000417268 HCLS1P14317 486 aaPredicted RBP14.91□□□□□ -0.02
SCAF8-203ENST00000417268 AXDND1Q5T1B0 1012 aaPredicted RBP14.9□□□□□ -0.02
SCAF8-203ENST00000417268 SPATA32Q96LK8 384 aa14.9□□□□□ -0.02
SCAF8-203ENST00000417268 THRAP3Q9Y2W1 955 aaKnown RBP14.9□□□□□ -0.02
SCAF8-203ENST00000417268 CYP7A1P22680 504 aa14.9□□□□□ -0.02
SCAF8-203ENST00000417268 PDE4BQ07343 736 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms