RNA–Protein interactions for RNA: ENST00000417122.6

ITGB1-204, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-204ENST00000417122 FZD9O00144 591 aa20.02■□□□□ 0.8
ITGB1-204ENST00000417122 HSP90B1P14625 803 aaKnown RBP20.02■□□□□ 0.8
ITGB1-204ENST00000417122 NEXNQ0ZGT2 675 aa20.02■□□□□ 0.8
ITGB1-204ENST00000417122 FSTL1Q12841 308 aa20.02■□□□□ 0.8
ITGB1-204ENST00000417122 FLIIQ13045 1269 aa20.02■□□□□ 0.8
ITGB1-204ENST00000417122 ZNF521Q96K83 1311 aa20.02■□□□□ 0.79
ITGB1-204ENST00000417122 ZNF541Q9H0D2 1346 aa20.02■□□□□ 0.79
ITGB1-204ENST00000417122 IGKV5-2P06315 115 aa20.01■□□□□ 0.79
ITGB1-204ENST00000417122 TMC4Q7Z404 712 aa20.01■□□□□ 0.79
ITGB1-204ENST00000417122 LARGE2Q8N3Y3 721 aa20.01■□□□□ 0.79
ITGB1-204ENST00000417122 COL4A5P29400 1685 aa20■□□□□ 0.79
ITGB1-204ENST00000417122 DPP8Q6V1X1 898 aaPredicted RBP20■□□□□ 0.79
ITGB1-204ENST00000417122 MPNDQ8N594 471 aa20■□□□□ 0.79
ITGB1-204ENST00000417122 SMC1BQ8NDV3 1235 aa20■□□□□ 0.79
ITGB1-204ENST00000417122 JARID2Q92833 1246 aaPredicted RBP20■□□□□ 0.79
ITGB1-204ENST00000417122 CELF1Q92879 486 aaKnown RBP20■□□□□ 0.79
ITGB1-204ENST00000417122 CCER2I3L3R5 266 aa19.99■□□□□ 0.79
ITGB1-204ENST00000417122 PDE8AO60658 829 aa19.99■□□□□ 0.79
ITGB1-204ENST00000417122 FKBP5Q13451 457 aaPredicted RBP19.99■□□□□ 0.79
ITGB1-204ENST00000417122 CWF19L2Q2TBE0 894 aaKnown RBP19.99■□□□□ 0.79
ITGB1-204ENST00000417122 SUPT20HQ8NEM7 779 aa19.99■□□□□ 0.79
ITGB1-204ENST00000417122 L3MBTL3Q96JM7 780 aaPredicted RBP19.99■□□□□ 0.79
ITGB1-204ENST00000417122 RTFDC1Q9BY42 306 aaPredicted RBP19.99■□□□□ 0.79
ITGB1-204ENST00000417122 VPS33BQ9H267 617 aa19.99■□□□□ 0.79
ITGB1-204ENST00000417122 SCN4AP35499 1836 aa19.99■□□□□ 0.79
ITGB1-204ENST00000417122 LRRC37AA6NMS7 1700 aa19.99■□□□□ 0.79
ITGB1-204ENST00000417122 IQCA1LA6NCM1 817 aa19.98■□□□□ 0.79
ITGB1-204ENST00000417122 PPIP5K2O43314 1243 aa19.98■□□□□ 0.79
ITGB1-204ENST00000417122 EIF6P56537 245 aaKnown RBP19.98■□□□□ 0.79
ITGB1-204ENST00000417122 CDHR2Q9BYE9 1310 aa19.98■□□□□ 0.79
ITGB1-204ENST00000417122 COL4A1P02462 1669 aa19.97■□□□□ 0.79
ITGB1-204ENST00000417122 NEURL1BA8MQ27 555 aa19.97■□□□□ 0.79
ITGB1-204ENST00000417122 APLP1P51693 650 aa19.97■□□□□ 0.79
ITGB1-204ENST00000417122 AOC3Q16853 763 aa19.97■□□□□ 0.79
ITGB1-204ENST00000417122 CCDC152Q4G0S7 254 aa19.97■□□□□ 0.79
ITGB1-204ENST00000417122 NIM1KQ8IY84 436 aa19.97■□□□□ 0.79
ITGB1-204ENST00000417122 DNAAF4Q8WXU2 420 aa19.97■□□□□ 0.79
ITGB1-204ENST00000417122 RPS8P62241 208 aaKnown RBP19.96■□□□□ 0.79
ITGB1-204ENST00000417122 GPC2Q8N158 579 aa19.96■□□□□ 0.79
ITGB1-204ENST00000417122 SEC31BQ9NQW1 1179 aa19.96■□□□□ 0.79
ITGB1-204ENST00000417122 MYH3P11055 1940 aa19.95■□□□□ 0.78
ITGB1-204ENST00000417122 CCDC85AQ96PX6 553 aaPredicted RBP19.94■□□□□ 0.78
ITGB1-204ENST00000417122 TAF1DQ9H5J8 278 aaPredicted RBP19.94■□□□□ 0.78
ITGB1-204ENST00000417122 HACL1Q9UJ83 578 aa19.94■□□□□ 0.78
ITGB1-204ENST00000417122 GJA3Q9Y6H8 435 aa19.94■□□□□ 0.78
ITGB1-204ENST00000417122 DUOX1Q9NRD9 1551 aa19.94■□□□□ 0.78
ITGB1-204ENST00000417122 E9PSI1 815 aa19.93■□□□□ 0.78
ITGB1-204ENST00000417122 H7C1W4 665 aa19.93■□□□□ 0.78
ITGB1-204ENST00000417122 CTSWP56202 376 aa19.93■□□□□ 0.78
ITGB1-204ENST00000417122 KIAA2012Q0VF49 1180 aa19.93■□□□□ 0.78
ITGB1-204ENST00000417122 GCKRQ14397 625 aa19.93■□□□□ 0.78
ITGB1-204ENST00000417122 LINS1Q8NG48 757 aa19.93■□□□□ 0.78
ITGB1-204ENST00000417122 NSFL1CQ9UNZ2 370 aaKnown RBP19.93■□□□□ 0.78
ITGB1-204ENST00000417122 POTEIP0CG38 1075 aa19.92■□□□□ 0.78
ITGB1-204ENST00000417122 POTEJP0CG39 1038 aa19.92■□□□□ 0.78
ITGB1-204ENST00000417122 UBE3BQ7Z3V4 1068 aa19.92■□□□□ 0.78
ITGB1-204ENST00000417122 F6X3S4 739 aa19.91■□□□□ 0.78
ITGB1-204ENST00000417122 GPSM2P81274 684 aa19.91■□□□□ 0.78
ITGB1-204ENST00000417122 TTLL11Q8NHH1 800 aa19.91■□□□□ 0.78
ITGB1-204ENST00000417122 ZNRF3Q9ULT6 936 aa19.91■□□□□ 0.78
ITGB1-204ENST00000417122 LTBP1Q14766 1721 aa19.9■□□□□ 0.78
ITGB1-204ENST00000417122 EPHX2P34913 555 aa19.9■□□□□ 0.78
ITGB1-204ENST00000417122 SLFN5Q08AF3 891 aa19.9■□□□□ 0.78
ITGB1-204ENST00000417122 CHADLQ6NUI6 762 aa19.9■□□□□ 0.78
ITGB1-204ENST00000417122 ANKRD18AQ8IVF6 992 aa19.9■□□□□ 0.78
ITGB1-204ENST00000417122 C6orf229H3BNL8 230 aa19.89■□□□□ 0.77
ITGB1-204ENST00000417122 WASHC4Q2M389 1173 aa19.89■□□□□ 0.77
ITGB1-204ENST00000417122 EAPPQ56P03 285 aaPredicted RBP19.89■□□□□ 0.77
ITGB1-204ENST00000417122 LDHDQ86WU2 507 aa19.89■□□□□ 0.77
ITGB1-204ENST00000417122 CDC5LQ99459 802 aaKnown RBP19.89■□□□□ 0.77
ITGB1-204ENST00000417122 POLLQ9UGP5 575 aa19.89■□□□□ 0.77
ITGB1-204ENST00000417122 LMOD1P29536 600 aaPredicted RBP19.88■□□□□ 0.77
ITGB1-204ENST00000417122 CASP7P55210 303 aa19.88■□□□□ 0.77
ITGB1-204ENST00000417122 CXCL9Q07325 125 aa19.88■□□□□ 0.77
ITGB1-204ENST00000417122 BEND3Q5T5X7 828 aa19.88■□□□□ 0.77
ITGB1-204ENST00000417122 EYA3Q99504 573 aa19.88■□□□□ 0.77
ITGB1-204ENST00000417122 PLA2G12BQ9BX93 195 aa19.88■□□□□ 0.77
ITGB1-204ENST00000417122 GREM2Q9H772 168 aa19.88■□□□□ 0.77
ITGB1-204ENST00000417122 PODXL2Q9NZ53 605 aa19.88■□□□□ 0.77
ITGB1-204ENST00000417122 RIMBP2O15034 1052 aa19.87■□□□□ 0.77
ITGB1-204ENST00000417122 SCNN1DP51172 638 aa19.87■□□□□ 0.77
ITGB1-204ENST00000417122 HTRA3P83110 453 aa19.87■□□□□ 0.77
ITGB1-204ENST00000417122 CIAPIN1Q6FI81 312 aa19.87■□□□□ 0.77
ITGB1-204ENST00000417122 PNMA8AQ86V59 439 aaPredicted RBP19.87■□□□□ 0.77
ITGB1-204ENST00000417122 TBC1D16Q8TBP0 767 aa19.87■□□□□ 0.77
ITGB1-204ENST00000417122 CDCA7LQ96GN5 454 aa19.87■□□□□ 0.77
ITGB1-204ENST00000417122 ANKIB1Q9P2G1 1089 aa19.87■□□□□ 0.77
ITGB1-204ENST00000417122 SPEF2Q9C093 1822 aa19.87■□□□□ 0.77
ITGB1-204ENST00000417122 RTL9Q8NET4 1388 aa19.86■□□□□ 0.77
ITGB1-204ENST00000417122 ADAMTSL1Q8N6G6 1762 aa19.86■□□□□ 0.77
ITGB1-204ENST00000417122 CLEC11AQ9Y240 323 aa19.86■□□□□ 0.77
ITGB1-204ENST00000417122 YDJCA8MPS7 323 aa19.85■□□□□ 0.77
ITGB1-204ENST00000417122 RAD17O75943 681 aa19.85■□□□□ 0.77
ITGB1-204ENST00000417122 TNIP1Q15025 636 aa19.85■□□□□ 0.77
ITGB1-204ENST00000417122 DIEXFQ68CQ4 756 aaKnown RBP19.85■□□□□ 0.77
ITGB1-204ENST00000417122 MRPL50Q8N5N7 158 aaKnown RBP19.85■□□□□ 0.77
ITGB1-204ENST00000417122 DNAJC5GQ8N7S2 189 aa19.85■□□□□ 0.77
ITGB1-204ENST00000417122 GPR101Q96P66 508 aaPredicted RBP19.85■□□□□ 0.77
ITGB1-204ENST00000417122 GGA1Q9UJY5 639 aa19.85■□□□□ 0.77
ITGB1-204ENST00000417122 UFL1O94874 794 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms