RNA–Protein interactions for RNA: ENST00000416742.5

LINC00494-201, long intergenic non-protein coding RNA 494, humanhuman

TSL 1 (best) BASIC

Gene LINC00494, Length 3,544 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00494-201ENST00000416742 BTG4Q9NY30 223 aa11.91□□□□□ -0.5
LINC00494-201ENST00000416742 ASAP1Q9ULH1 1129 aa11.91□□□□□ -0.5
LINC00494-201ENST00000416742 CRYBG1Q9Y4K1 1723 aa11.91□□□□□ -0.5
LINC00494-201ENST00000416742 GADD45BO75293 160 aaPredicted RBP11.91□□□□□ -0.5
LINC00494-201ENST00000416742 MBD3O95983 291 aa11.91□□□□□ -0.5
LINC00494-201ENST00000416742 NKX1-1Q15270 411 aaPredicted RBP11.91□□□□□ -0.5
LINC00494-201ENST00000416742 ME3Q16798 604 aa11.91□□□□□ -0.5
LINC00494-201ENST00000416742 LRRC24Q50LG9 513 aa11.91□□□□□ -0.5
LINC00494-201ENST00000416742 DNAJC10Q8IXB1 793 aa11.91□□□□□ -0.5
LINC00494-201ENST00000416742 ZSCAN31Q96LW9 406 aaPredicted RBP11.91□□□□□ -0.5
LINC00494-201ENST00000416742 A0A0G2JS52 829 aa11.91□□□□□ -0.5
LINC00494-201ENST00000416742 ZSCAN22P10073 491 aaPredicted RBP11.91□□□□□ -0.5
LINC00494-201ENST00000416742 CCDC191Q8NCU4 936 aa11.91□□□□□ -0.5
LINC00494-201ENST00000416742 VPS37CA5D8V6 355 aaPredicted RBP11.9□□□□□ -0.5
LINC00494-201ENST00000416742 RBSNQ9H1K0 784 aa11.9□□□□□ -0.5
LINC00494-201ENST00000416742 CNPY2Q9Y2B0 182 aa11.9□□□□□ -0.5
LINC00494-201ENST00000416742 GOLIM4O00461 696 aa11.9□□□□□ -0.5
LINC00494-201ENST00000416742 TAF5LO75529 589 aa11.9□□□□□ -0.5
LINC00494-201ENST00000416742 STK3Q13188 491 aa11.9□□□□□ -0.5
LINC00494-201ENST00000416742 KCNB2Q92953 911 aa11.9□□□□□ -0.5
LINC00494-201ENST00000416742 SYTL4Q96C24 671 aaPredicted RBP11.9□□□□□ -0.5
LINC00494-201ENST00000416742 AFDNP55196 1824 aaKnown RBP11.9□□□□□ -0.5
LINC00494-201ENST00000416742 PKD1L3Q7Z443 1732 aa11.9□□□□□ -0.5
LINC00494-201ENST00000416742 RPAP1Q9BWH6 1393 aaPredicted RBP11.9□□□□□ -0.51
LINC00494-201ENST00000416742 SLFNL1Q499Z3 407 aa11.9□□□□□ -0.51
LINC00494-201ENST00000416742 PUS3Q9BZE2 481 aaKnown RBP11.9□□□□□ -0.51
LINC00494-201ENST00000416742 SH2B1Q9NRF2 756 aaPredicted RBP11.9□□□□□ -0.51
LINC00494-201ENST00000416742 TPCN1Q9ULQ1 816 aa11.9□□□□□ -0.51
LINC00494-201ENST00000416742 ATG9AQ7Z3C6 839 aa11.89□□□□□ -0.51
LINC00494-201ENST00000416742 ABCC6O95255 1503 aa11.89□□□□□ -0.51
LINC00494-201ENST00000416742 PLEKHG2Q9H7P9 1386 aa11.89□□□□□ -0.51
LINC00494-201ENST00000416742 HAUS7Q99871 368 aa11.89□□□□□ -0.51
LINC00494-201ENST00000416742 KDM4FA0A1W2PPD8 638 aa11.89□□□□□ -0.51
LINC00494-201ENST00000416742 EYA2O00167 538 aa11.89□□□□□ -0.51
LINC00494-201ENST00000416742 FIBPO43427 364 aa11.89□□□□□ -0.51
LINC00494-201ENST00000416742 IL15P40933 162 aaPredicted RBP11.89□□□□□ -0.51
LINC00494-201ENST00000416742 PIGBQ92521 554 aa11.89□□□□□ -0.51
LINC00494-201ENST00000416742 FAM89AQ96GI7 184 aa11.89□□□□□ -0.51
LINC00494-201ENST00000416742 CCDC57Q2TAC2 916 aa11.88□□□□□ -0.51
LINC00494-201ENST00000416742 TAF7LQ5H9L4 462 aa11.88□□□□□ -0.51
LINC00494-201ENST00000416742 GORABQ5T7V8 394 aa11.88□□□□□ -0.51
LINC00494-201ENST00000416742 RNF214Q8ND24 703 aa11.88□□□□□ -0.51
LINC00494-201ENST00000416742 XIRP1Q702N8 1843 aaKnown RBP11.88□□□□□ -0.51
LINC00494-201ENST00000416742 F13A1P00488 732 aa11.88□□□□□ -0.51
LINC00494-201ENST00000416742 GPTP24298 496 aa11.88□□□□□ -0.51
LINC00494-201ENST00000416742 TCIRG1Q13488 830 aa11.88□□□□□ -0.51
LINC00494-201ENST00000416742 MCMDC2Q4G0Z9 681 aa11.88□□□□□ -0.51
LINC00494-201ENST00000416742 KIF6Q6ZMV9 814 aa11.88□□□□□ -0.51
LINC00494-201ENST00000416742 CEP126Q9P2H0 1117 aa11.88□□□□□ -0.51
LINC00494-201ENST00000416742 MED23Q9ULK4 1368 aa11.88□□□□□ -0.51
LINC00494-201ENST00000416742 IFIT1P09914 478 aaKnown RBP11.87□□□□□ -0.51
LINC00494-201ENST00000416742 RPS6KB1P23443 525 aa11.87□□□□□ -0.51
LINC00494-201ENST00000416742 LARP1BQ659C4 914 aaKnown RBP11.87□□□□□ -0.51
LINC00494-201ENST00000416742 LRSAM1Q6UWE0 723 aa11.87□□□□□ -0.51
LINC00494-201ENST00000416742 ARFGEF2Q9Y6D5 1785 aa11.87□□□□□ -0.51
LINC00494-201ENST00000416742 FGD1P98174 961 aa11.87□□□□□ -0.51
LINC00494-201ENST00000416742 KBTBD3Q8NAB2 608 aa11.87□□□□□ -0.51
LINC00494-201ENST00000416742 SNRKQ9NRH2 765 aa11.87□□□□□ -0.51
LINC00494-201ENST00000416742 PAG1Q9NWQ8 432 aa11.87□□□□□ -0.51
LINC00494-201ENST00000416742 A0A1B0GUL7 405 aa11.87□□□□□ -0.51
LINC00494-201ENST00000416742 CCDC173Q0VFZ6 552 aa11.87□□□□□ -0.51
LINC00494-201ENST00000416742 ST3GAL1Q11201 340 aa11.87□□□□□ -0.51
LINC00494-201ENST00000416742 FERMT3Q86UX7 667 aa11.87□□□□□ -0.51
LINC00494-201ENST00000416742 SYAP1Q96A49 352 aaPredicted RBP11.87□□□□□ -0.51
LINC00494-201ENST00000416742 STARD3NLO95772 234 aa11.86□□□□□ -0.51
LINC00494-201ENST00000416742 NEK1Q96PY6 1258 aa11.86□□□□□ -0.51
LINC00494-201ENST00000416742 LRRC2Q9BYS8 371 aa11.86□□□□□ -0.51
LINC00494-201ENST00000416742 HMG20BQ9P0W2 317 aa11.86□□□□□ -0.51
LINC00494-201ENST00000416742 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.86□□□□□ -0.51
LINC00494-201ENST00000416742 MTMR6Q9Y217 621 aa11.86□□□□□ -0.51
LINC00494-201ENST00000416742 ATP6V1DQ9Y5K8 247 aa11.86□□□□□ -0.51
LINC00494-201ENST00000416742 COL15A1P39059 1388 aa11.86□□□□□ -0.51
LINC00494-201ENST00000416742 HSP90B1P14625 803 aaKnown RBP11.86□□□□□ -0.51
LINC00494-201ENST00000416742 FKBP4Q02790 459 aaKnown RBP eCLIP11.86□□□□□ -0.51
LINC00494-201ENST00000416742 ANKRD1Q15327 319 aa11.86□□□□□ -0.51
LINC00494-201ENST00000416742 SYNE4Q8N205 404 aa11.86□□□□□ -0.51
LINC00494-201ENST00000416742 ISCA1Q9BUE6 129 aa11.86□□□□□ -0.51
LINC00494-201ENST00000416742 ATG3Q9NT62 314 aa11.86□□□□□ -0.51
LINC00494-201ENST00000416742 DNM1Q05193 864 aaKnown RBP11.86□□□□□ -0.51
LINC00494-201ENST00000416742 U3KPZ7 1027 aaPredicted RBP11.86□□□□□ -0.51
LINC00494-201ENST00000416742 TCHHQ07283 1943 aa11.86□□□□□ -0.51
LINC00494-201ENST00000416742 ZNF609O15014 1411 aa11.85□□□□□ -0.51
LINC00494-201ENST00000416742 ESPNB1AK53 854 aa11.85□□□□□ -0.51
LINC00494-201ENST00000416742 TEX13AQ9BXU3 409 aaPredicted RBP11.85□□□□□ -0.51
LINC00494-201ENST00000416742 PARP4Q9UKK3 1724 aaKnown RBP11.85□□□□□ -0.51
LINC00494-201ENST00000416742 TOB2Q14106 344 aaPredicted RBP11.85□□□□□ -0.51
LINC00494-201ENST00000416742 KRT32Q14532 448 aa11.85□□□□□ -0.51
LINC00494-201ENST00000416742 CYP21A2P08686 494 aa11.85□□□□□ -0.51
LINC00494-201ENST00000416742 KCPQ6ZWJ8 1503 aa11.85□□□□□ -0.51
LINC00494-201ENST00000416742 HLFQ16534 295 aa11.84□□□□□ -0.51
LINC00494-201ENST00000416742 FAM173BQ6P4H8 233 aa11.84□□□□□ -0.51
LINC00494-201ENST00000416742 NAP1L2Q9ULW6 460 aaPredicted RBP11.84□□□□□ -0.51
LINC00494-201ENST00000416742 ADORA1P30542 326 aa11.84□□□□□ -0.51
LINC00494-201ENST00000416742 TTC39AQ5SRH9 613 aa11.84□□□□□ -0.51
LINC00494-201ENST00000416742 Q6ZUG5 572 aa11.84□□□□□ -0.51
LINC00494-201ENST00000416742 GPR108Q9NPR9 543 aa11.84□□□□□ -0.51
LINC00494-201ENST00000416742 EXOC5O00471 708 aa11.83□□□□□ -0.51
LINC00494-201ENST00000416742 IFIT5Q13325 482 aaKnown RBP11.83□□□□□ -0.51
LINC00494-201ENST00000416742 CCDC158Q5M9N0 1113 aa11.83□□□□□ -0.51
LINC00494-201ENST00000416742 TSPY26PQ9H489 355 aa11.83□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms