RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 MBIPQ9NS73 344 aa18.75■□□□□ 0.59
PAF1-202ENST00000416728 CXCL9Q07325 125 aa18.74■□□□□ 0.59
PAF1-202ENST00000416728 KIAA2012Q0VF49 1180 aa18.74■□□□□ 0.59
PAF1-202ENST00000416728 ISCA1Q9BUE6 129 aa18.74■□□□□ 0.59
PAF1-202ENST00000416728 GPRC5DQ9NZD1 345 aa18.74■□□□□ 0.59
PAF1-202ENST00000416728 LTBP1Q14766 1721 aa18.74■□□□□ 0.59
PAF1-202ENST00000416728 RASSF10A6NK89 507 aa18.73■□□□□ 0.59
PAF1-202ENST00000416728 ATP5J2-PTCD1G3V325 749 aa18.73■□□□□ 0.59
PAF1-202ENST00000416728 FAM89AQ96GI7 184 aa18.73■□□□□ 0.59
PAF1-202ENST00000416728 ABT1Q9ULW3 272 aaKnown RBP18.73■□□□□ 0.59
PAF1-202ENST00000416728 APAF1O14727 1248 aa18.72■□□□□ 0.59
PAF1-202ENST00000416728 CAPN15O75808 1086 aa18.72■□□□□ 0.59
PAF1-202ENST00000416728 CALD1Q05682 793 aaKnown RBP18.72■□□□□ 0.59
PAF1-202ENST00000416728 DEFB115Q30KQ5 88 aa18.72■□□□□ 0.59
PAF1-202ENST00000416728 AIDAQ96BJ3 306 aa18.72■□□□□ 0.59
PAF1-202ENST00000416728 ADARB2Q9NS39 739 aaKnown RBP18.72■□□□□ 0.59
PAF1-202ENST00000416728 IFT57Q9NWB7 429 aa18.72■□□□□ 0.59
PAF1-202ENST00000416728 FOXN1O15353 648 aa18.71■□□□□ 0.59
PAF1-202ENST00000416728 ZNF853P0CG23 659 aa18.71■□□□□ 0.59
PAF1-202ENST00000416728 GMPSP49915 693 aaPredicted RBP18.71■□□□□ 0.59
PAF1-202ENST00000416728 GNAI1P63096 354 aa18.71■□□□□ 0.59
PAF1-202ENST00000416728 CIAPIN1Q6FI81 312 aa18.71■□□□□ 0.59
PAF1-202ENST00000416728 LAMB2P55268 1798 aa18.7■□□□□ 0.58
PAF1-202ENST00000416728 GOLGA2Q08379 1002 aa18.7■□□□□ 0.58
PAF1-202ENST00000416728 TNIP1Q15025 636 aa18.7■□□□□ 0.58
PAF1-202ENST00000416728 SF3B3Q15393 1217 aaKnown RBP18.7■□□□□ 0.58
PAF1-202ENST00000416728 RTL5Q5HYW3 569 aaPredicted RBP18.7■□□□□ 0.58
PAF1-202ENST00000416728 RAD17O75943 681 aa18.69■□□□□ 0.58
PAF1-202ENST00000416728 TRIM28Q13263 835 aaKnown RBP18.69■□□□□ 0.58
PAF1-202ENST00000416728 RIC3Q7Z5B4 369 aa18.69■□□□□ 0.58
PAF1-202ENST00000416728 CELF1Q92879 486 aaKnown RBP18.69■□□□□ 0.58
PAF1-202ENST00000416728 BCL2L13Q9BXK5 485 aa18.69■□□□□ 0.58
PAF1-202ENST00000416728 CDHR2Q9BYE9 1310 aa18.69■□□□□ 0.58
PAF1-202ENST00000416728 ELL2O00472 640 aaPredicted RBP18.68■□□□□ 0.58
PAF1-202ENST00000416728 IRS4O14654 1257 aaPredicted RBP18.68■□□□□ 0.58
PAF1-202ENST00000416728 FMR1Q06787 632 aaKnown RBP eCLIP18.68■□□□□ 0.58
PAF1-202ENST00000416728 NSFL1CQ9UNZ2 370 aaKnown RBP18.68■□□□□ 0.58
PAF1-202ENST00000416728 WDR33Q9C0J8 1336 aaKnown RBP18.68■□□□□ 0.58
PAF1-202ENST00000416728 TRAF5O00463 557 aa18.68■□□□□ 0.58
PAF1-202ENST00000416728 CTCFP49711 727 aaPredicted RBP18.68■□□□□ 0.58
PAF1-202ENST00000416728 PHAXQ9H814 394 aaKnown RBP18.68■□□□□ 0.58
PAF1-202ENST00000416728 WBP1LQ9NX94 342 aa18.68■□□□□ 0.58
PAF1-202ENST00000416728 YDJCA8MPS7 323 aa18.67■□□□□ 0.58
PAF1-202ENST00000416728 WASHC4Q2M389 1173 aa18.67■□□□□ 0.58
PAF1-202ENST00000416728 PRDM10Q9NQV6 1147 aa18.67■□□□□ 0.58
PAF1-202ENST00000416728 DUOX1Q9NRD9 1551 aa18.66■□□□□ 0.58
PAF1-202ENST00000416728 HSP90B1P14625 803 aaKnown RBP18.66■□□□□ 0.58
PAF1-202ENST00000416728 PAXIP1Q6ZW49 1069 aaPredicted RBP18.66■□□□□ 0.58
PAF1-202ENST00000416728 ZBTB38Q8NAP3 1195 aaPredicted RBP18.66■□□□□ 0.58
PAF1-202ENST00000416728 DDX60Q8IY21 1712 aaKnown RBP18.65■□□□□ 0.58
PAF1-202ENST00000416728 C6orf229H3BNL8 230 aa18.65■□□□□ 0.58
PAF1-202ENST00000416728 MAP2K1Q02750 393 aaPredicted RBP18.65■□□□□ 0.58
PAF1-202ENST00000416728 CST9Q5W186 159 aa18.65■□□□□ 0.58
PAF1-202ENST00000416728 MYD88Q99836 296 aa18.65■□□□□ 0.58
PAF1-202ENST00000416728 CHMP4AQ9BY43 222 aa18.65■□□□□ 0.58
PAF1-202ENST00000416728 LRRC37AA6NMS7 1700 aa18.64■□□□□ 0.57
PAF1-202ENST00000416728 H7C1D1 291 aa18.64■□□□□ 0.57
PAF1-202ENST00000416728 RIMBP2O15034 1052 aa18.64■□□□□ 0.57
PAF1-202ENST00000416728 ECE1P42892 770 aa18.64■□□□□ 0.57
PAF1-202ENST00000416728 RPS8P62241 208 aaKnown RBP18.64■□□□□ 0.57
PAF1-202ENST00000416728 GPSM2P81274 684 aa18.64■□□□□ 0.57
PAF1-202ENST00000416728 C8orf58Q8NAV2 365 aa18.64■□□□□ 0.57
PAF1-202ENST00000416728 ZC3H15Q8WU90 426 aaKnown RBP18.64■□□□□ 0.57
PAF1-202ENST00000416728 CAPNS2Q96L46 248 aa18.64■□□□□ 0.57
PAF1-202ENST00000416728 EYA3Q99504 573 aa18.64■□□□□ 0.57
PAF1-202ENST00000416728 DBNDD1Q9H9R9 158 aa18.64■□□□□ 0.57
PAF1-202ENST00000416728 CNOT7Q9UIV1 285 aaKnown RBP18.64■□□□□ 0.57
PAF1-202ENST00000416728 DDX58O95786 925 aaKnown RBP18.63■□□□□ 0.57
PAF1-202ENST00000416728 GRM1Q13255 1194 aa18.63■□□□□ 0.57
PAF1-202ENST00000416728 CCDC30Q5VVM6 783 aa18.63■□□□□ 0.57
PAF1-202ENST00000416728 MICALL2Q8IY33 904 aa18.63■□□□□ 0.57
PAF1-202ENST00000416728 CCDC191Q8NCU4 936 aa18.63■□□□□ 0.57
PAF1-202ENST00000416728 TRPM4Q8TD43 1214 aa18.63■□□□□ 0.57
PAF1-202ENST00000416728 GLIS2Q9BZE0 524 aaPredicted RBP18.63■□□□□ 0.57
PAF1-202ENST00000416728 POLLQ9UGP5 575 aa18.63■□□□□ 0.57
PAF1-202ENST00000416728 PGAP2Q9UHJ9 254 aa18.63■□□□□ 0.57
PAF1-202ENST00000416728 TLL2Q9Y6L7 1015 aa18.63■□□□□ 0.57
PAF1-202ENST00000416728 PSMD14O00487 310 aa18.62■□□□□ 0.57
PAF1-202ENST00000416728 CELF2O95319 508 aaKnown RBP18.62■□□□□ 0.57
PAF1-202ENST00000416728 LBX1P52954 281 aa18.62■□□□□ 0.57
PAF1-202ENST00000416728 HIRAP54198 1017 aaPredicted RBP18.62■□□□□ 0.57
PAF1-202ENST00000416728 CYP4F22Q6NT55 531 aa18.62■□□□□ 0.57
PAF1-202ENST00000416728 CWC25Q9NXE8 425 aaPredicted RBP18.62■□□□□ 0.57
PAF1-202ENST00000416728 ZBTB12Q9Y330 459 aaPredicted RBP18.62■□□□□ 0.57
PAF1-202ENST00000416728 TAF1P21675 1872 aa18.61■□□□□ 0.57
PAF1-202ENST00000416728 SHTN1A0MZ66 631 aa18.61■□□□□ 0.57
PAF1-202ENST00000416728 PCCAP05165 728 aaPredicted RBP18.61■□□□□ 0.57
PAF1-202ENST00000416728 CCDC152Q4G0S7 254 aa18.61■□□□□ 0.57
PAF1-202ENST00000416728 TBC1D16Q8TBP0 767 aa18.61■□□□□ 0.57
PAF1-202ENST00000416728 DPF2Q92785 391 aa18.61■□□□□ 0.57
PAF1-202ENST00000416728 SEC31BQ9NQW1 1179 aa18.61■□□□□ 0.57
PAF1-202ENST00000416728 ECE2O60344 883 aa18.6■□□□□ 0.57
PAF1-202ENST00000416728 PDE8AO60658 829 aa18.6■□□□□ 0.57
PAF1-202ENST00000416728 DOK7Q18PE1 504 aa18.6■□□□□ 0.57
PAF1-202ENST00000416728 CDC37L1Q7L3B6 337 aa18.6■□□□□ 0.57
PAF1-202ENST00000416728 GPR101Q96P66 508 aaPredicted RBP18.6■□□□□ 0.57
PAF1-202ENST00000416728 METTL22Q9BUU2 404 aaPredicted RBP18.6■□□□□ 0.57
PAF1-202ENST00000416728 COL4A1P02462 1669 aa18.6■□□□□ 0.57
PAF1-202ENST00000416728 HSPA8P11142 646 aaKnown RBP18.59■□□□□ 0.57
PAF1-202ENST00000416728 SAPCD2Q86UD0 394 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms