RNA–Protein interactions for RNA: ENST00000415620.1

LINC00428-201, long intergenic non-protein coding RNA 428, humanhuman

TSL 5 BASIC

Gene LINC00428, Length 227 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00428-201ENST00000415620 EPB42P16452 691 aa5.42□□□□□ -1.54
LINC00428-201ENST00000415620 GRNP28799 593 aaKnown RBP5.42□□□□□ -1.54
LINC00428-201ENST00000415620 GP2P55259 537 aaKnown RBP5.42□□□□□ -1.54
LINC00428-201ENST00000415620 PERM1Q5SV97 790 aa5.42□□□□□ -1.54
LINC00428-201ENST00000415620 TMEM130Q8N3G9 435 aa5.42□□□□□ -1.54
LINC00428-201ENST00000415620 TSEN2Q8NCE0 465 aaKnown RBP5.42□□□□□ -1.54
LINC00428-201ENST00000415620 MRPL18Q9H0U6 180 aaKnown RBP5.42□□□□□ -1.54
LINC00428-201ENST00000415620 OAS3Q9Y6K5 1087 aaKnown RBP5.42□□□□□ -1.54
LINC00428-201ENST00000415620 PALM3A6NDB9 673 aaPredicted RBP5.41□□□□□ -1.54
LINC00428-201ENST00000415620 MAP3K6O95382 1288 aa5.41□□□□□ -1.54
LINC00428-201ENST00000415620 OGFOD1Q8N543 542 aa5.41□□□□□ -1.54
LINC00428-201ENST00000415620 GAS2L2Q8NHY3 880 aa5.41□□□□□ -1.54
LINC00428-201ENST00000415620 POM121Q96HA1 1249 aa5.41□□□□□ -1.54
LINC00428-201ENST00000415620 POM121CA8CG34 1229 aa5.4□□□□□ -1.54
LINC00428-201ENST00000415620 KIAA1324LA8MWY0 1029 aaPredicted RBP5.4□□□□□ -1.54
LINC00428-201ENST00000415620 TGFBR3LH3BV60 316 aa5.4□□□□□ -1.54
LINC00428-201ENST00000415620 DLL1O00548 723 aa5.4□□□□□ -1.54
LINC00428-201ENST00000415620 ATP9BO43861 1147 aa5.4□□□□□ -1.54
LINC00428-201ENST00000415620 DEAF1O75398 565 aaPredicted RBP5.4□□□□□ -1.54
LINC00428-201ENST00000415620 ALX3O95076 343 aa5.4□□□□□ -1.54
LINC00428-201ENST00000415620 IGLV1-40P01703 118 aa5.4□□□□□ -1.54
LINC00428-201ENST00000415620 ARID4AP29374 1257 aaPredicted RBP5.4□□□□□ -1.54
LINC00428-201ENST00000415620 TRPM4Q8TD43 1214 aa5.4□□□□□ -1.54
LINC00428-201ENST00000415620 DCAF11Q8TEB1 546 aa5.4□□□□□ -1.54
LINC00428-201ENST00000415620 BCS1LQ9Y276 419 aa5.4□□□□□ -1.54
LINC00428-201ENST00000415620 RAXQ9Y2V3 346 aa5.4□□□□□ -1.54
LINC00428-201ENST00000415620 RBM19Q9Y4C8 960 aaKnown RBP5.4□□□□□ -1.54
LINC00428-201ENST00000415620 ATAD2Q6PL18 1390 aa5.4□□□□□ -1.55
LINC00428-201ENST00000415620 ZBTB42B2RXF5 422 aa5.39□□□□□ -1.55
LINC00428-201ENST00000415620 F8W735 103 aaPredicted RBP5.39□□□□□ -1.55
LINC00428-201ENST00000415620 RTN1Q16799 776 aa5.39□□□□□ -1.55
LINC00428-201ENST00000415620 DHX32Q7L7V1 743 aaKnown RBP5.39□□□□□ -1.55
LINC00428-201ENST00000415620 WWC1Q8IX03 1113 aa5.39□□□□□ -1.55
LINC00428-201ENST00000415620 NGLY1Q96IV0 654 aa5.39□□□□□ -1.55
LINC00428-201ENST00000415620 MKRN1Q9UHC7 482 aaKnown RBP5.39□□□□□ -1.55
LINC00428-201ENST00000415620 MED26O95402 600 aa5.38□□□□□ -1.55
LINC00428-201ENST00000415620 GRIK1P39086 918 aa5.38□□□□□ -1.55
LINC00428-201ENST00000415620 GPLD1P80108 840 aa5.38□□□□□ -1.55
LINC00428-201ENST00000415620 PLAURQ03405 335 aa5.38□□□□□ -1.55
LINC00428-201ENST00000415620 INTS5Q6P9B9 1019 aaKnown RBP5.38□□□□□ -1.55
LINC00428-201ENST00000415620 SMG9Q9H0W8 520 aaKnown RBP5.38□□□□□ -1.55
LINC00428-201ENST00000415620 C11orf16Q9NQ32 467 aa5.38□□□□□ -1.55
LINC00428-201ENST00000415620 STOML1Q9UBI4 398 aa5.38□□□□□ -1.55
LINC00428-201ENST00000415620 TGFB1P01137 390 aa5.37□□□□□ -1.55
LINC00428-201ENST00000415620 INPP5BP32019 993 aa5.37□□□□□ -1.55
LINC00428-201ENST00000415620 MLLT1Q03111 559 aaPredicted RBP5.37□□□□□ -1.55
LINC00428-201ENST00000415620 KRT25Q7Z3Z0 450 aa5.37□□□□□ -1.55
LINC00428-201ENST00000415620 CHMP7Q8WUX9 453 aaPredicted RBP5.37□□□□□ -1.55
LINC00428-201ENST00000415620 SCG3Q8WXD2 468 aaKnown RBP5.37□□□□□ -1.55
LINC00428-201ENST00000415620 SRA1Q9HD15 236 aaKnown RBP5.37□□□□□ -1.55
LINC00428-201ENST00000415620 ZFATQ9P243 1243 aa5.37□□□□□ -1.55
LINC00428-201ENST00000415620 RIMBP3CA6NJZ7 1639 aa5.37□□□□□ -1.55
LINC00428-201ENST00000415620 RIMBP3BA6NNM3 1639 aa5.37□□□□□ -1.55
LINC00428-201ENST00000415620 RIMBP3Q9UFD9 1639 aa5.37□□□□□ -1.55
LINC00428-201ENST00000415620 RARAP10276 462 aa5.36□□□□□ -1.55
LINC00428-201ENST00000415620 GLB1P16278 677 aa5.36□□□□□ -1.55
LINC00428-201ENST00000415620 TARSP26639 723 aaKnown RBP5.36□□□□□ -1.55
LINC00428-201ENST00000415620 HDGFL1Q5TGJ6 251 aa5.36□□□□□ -1.55
LINC00428-201ENST00000415620 MAP4K3Q8IVH8 894 aa5.36□□□□□ -1.55
LINC00428-201ENST00000415620 ZNF594Q96JF6 807 aaPredicted RBP5.36□□□□□ -1.55
LINC00428-201ENST00000415620 THOC2Q8NI27 1593 aaKnown RBP5.36□□□□□ -1.55
LINC00428-201ENST00000415620 ARID1BQ8NFD5 2236 aaPredicted RBP5.35□□□□□ -1.55
LINC00428-201ENST00000415620 EIF2AK2P19525 551 aaKnown RBP5.35□□□□□ -1.55
LINC00428-201ENST00000415620 SEC13P55735 322 aa5.35□□□□□ -1.55
LINC00428-201ENST00000415620 Q6ZS46 218 aa5.35□□□□□ -1.55
LINC00428-201ENST00000415620 HFE2Q6ZVN8 426 aa5.35□□□□□ -1.55
LINC00428-201ENST00000415620 IFT43Q96FT9 208 aa5.35□□□□□ -1.55
LINC00428-201ENST00000415620 BAZ1AQ9NRL2 1556 aaPredicted RBP5.34□□□□□ -1.55
LINC00428-201ENST00000415620 DHX15O43143 795 aaKnown RBP5.34□□□□□ -1.55
LINC00428-201ENST00000415620 SASH3O75995 380 aa5.34□□□□□ -1.55
LINC00428-201ENST00000415620 WNT11O96014 354 aa5.34□□□□□ -1.55
LINC00428-201ENST00000415620 IGFBP4P22692 258 aa5.34□□□□□ -1.55
LINC00428-201ENST00000415620 IDH3AP50213 366 aa5.34□□□□□ -1.55
LINC00428-201ENST00000415620 NRLP54845 237 aa5.34□□□□□ -1.55
LINC00428-201ENST00000415620 TPRNQ4KMQ1 711 aa5.34□□□□□ -1.55
LINC00428-201ENST00000415620 IL22RA1Q8N6P7 574 aa5.34□□□□□ -1.55
LINC00428-201ENST00000415620 SPINK2P20155 84 aa5.33□□□□□ -1.56
LINC00428-201ENST00000415620 ARSDP51689 593 aa5.33□□□□□ -1.56
LINC00428-201ENST00000415620 NFIAQ12857 509 aa5.33□□□□□ -1.56
LINC00428-201ENST00000415620 GDF6Q6KF10 455 aaPredicted RBP5.33□□□□□ -1.56
LINC00428-201ENST00000415620 ZDHHC13Q8IUH4 622 aa5.33□□□□□ -1.56
LINC00428-201ENST00000415620 AGGF1Q8N302 714 aaeCLIP5.33□□□□□ -1.56
LINC00428-201ENST00000415620 PLD4Q96BZ4 506 aa5.33□□□□□ -1.56
LINC00428-201ENST00000415620 RBSNQ9H1K0 784 aa5.33□□□□□ -1.56
LINC00428-201ENST00000415620 SHROOM4Q9ULL8 1493 aa5.32□□□□□ -1.56
LINC00428-201ENST00000415620 LOC102724428A0A0B4J2F2 783 aa5.32□□□□□ -1.56
LINC00428-201ENST00000415620 RAD21O60216 631 aa5.32□□□□□ -1.56
LINC00428-201ENST00000415620 SLC24A1O60721 1099 aa5.32□□□□□ -1.56
LINC00428-201ENST00000415620 EGFRP00533 1210 aa5.32□□□□□ -1.56
LINC00428-201ENST00000415620 GHRHP01286 108 aa5.32□□□□□ -1.56
LINC00428-201ENST00000415620 RASA1P20936 1047 aa5.32□□□□□ -1.56
LINC00428-201ENST00000415620 SIK1P57059 783 aa5.32□□□□□ -1.56
LINC00428-201ENST00000415620 SETDB1Q15047 1291 aa5.32□□□□□ -1.56
LINC00428-201ENST00000415620 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.32□□□□□ -1.56
LINC00428-201ENST00000415620 DTX1Q86Y01 620 aa5.32□□□□□ -1.56
LINC00428-201ENST00000415620 CACTIN-AS1Q8N1I8 211 aa5.32□□□□□ -1.56
LINC00428-201ENST00000415620 UBL7Q96S82 380 aaPredicted RBP5.32□□□□□ -1.56
LINC00428-201ENST00000415620 CEP41Q9BYV8 373 aa5.32□□□□□ -1.56
LINC00428-201ENST00000415620 MUC3BQ9H195 1237 aa5.32□□□□□ -1.56
LINC00428-201ENST00000415620 QTRT2Q9H974 415 aaKnown RBP5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 141.5 ms