RNA–Protein interactions for RNA: ENST00000415600.6

PTPRU-203, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 1,590 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-203ENST00000415600 GJA3Q9Y6H8 435 aa26.31■■□□□ 1.8
PTPRU-203ENST00000415600 C8orf58Q8NAV2 365 aa26.3■■□□□ 1.8
PTPRU-203ENST00000415600 CLEC11AQ9Y240 323 aa26.3■■□□□ 1.8
PTPRU-203ENST00000415600 WWC1Q8IX03 1113 aa26.29■■□□□ 1.8
PTPRU-203ENST00000415600 RTFDC1Q9BY42 306 aaPredicted RBP26.29■■□□□ 1.8
PTPRU-203ENST00000415600 IL16Q14005 1332 aa26.29■■□□□ 1.8
PTPRU-203ENST00000415600 SF3B3Q15393 1217 aaKnown RBP26.29■■□□□ 1.8
PTPRU-203ENST00000415600 IRS4O14654 1257 aaPredicted RBP26.28■■□□□ 1.8
PTPRU-203ENST00000415600 ZBTB38Q8NAP3 1195 aaPredicted RBP26.28■■□□□ 1.8
PTPRU-203ENST00000415600 CCDC191Q8NCU4 936 aa26.28■■□□□ 1.8
PTPRU-203ENST00000415600 PHAXQ9H814 394 aaKnown RBP26.28■■□□□ 1.8
PTPRU-203ENST00000415600 JMYQ8N9B5 988 aa26.27■■□□□ 1.8
PTPRU-203ENST00000415600 CREBZFQ9NS37 354 aa26.27■■□□□ 1.8
PTPRU-203ENST00000415600 AOC3Q16853 763 aa26.26■■□□□ 1.79
PTPRU-203ENST00000415600 ZNRF3Q9ULT6 936 aa26.26■■□□□ 1.79
PTPRU-203ENST00000415600 MYD88Q99836 296 aa26.25■■□□□ 1.79
PTPRU-203ENST00000415600 POTEIP0CG38 1075 aa26.24■■□□□ 1.79
PTPRU-203ENST00000415600 POTEJP0CG39 1038 aa26.24■■□□□ 1.79
PTPRU-203ENST00000415600 RTL5Q5HYW3 569 aaPredicted RBP26.24■■□□□ 1.79
PTPRU-203ENST00000415600 CWC25Q9NXE8 425 aaPredicted RBP26.24■■□□□ 1.79
PTPRU-203ENST00000415600 LAMB2P55268 1798 aa26.24■■□□□ 1.79
PTPRU-203ENST00000415600 NEXNQ0ZGT2 675 aa26.24■■□□□ 1.79
PTPRU-203ENST00000415600 TSR2Q969E8 191 aaKnown RBP26.24■■□□□ 1.79
PTPRU-203ENST00000415600 ZNF428Q96B54 188 aa26.24■■□□□ 1.79
PTPRU-203ENST00000415600 METTL22Q9BUU2 404 aaPredicted RBP26.24■■□□□ 1.79
PTPRU-203ENST00000415600 KIAA2012Q0VF49 1180 aa26.23■■□□□ 1.79
PTPRU-203ENST00000415600 TWISTNBQ3B726 338 aaPredicted RBP26.22■■□□□ 1.79
PTPRU-203ENST00000415600 PCCAP05165 728 aaPredicted RBP26.21■■□□□ 1.79
PTPRU-203ENST00000415600 TNIP1Q15025 636 aa26.21■■□□□ 1.79
PTPRU-203ENST00000415600 CCDC152Q4G0S7 254 aa26.21■■□□□ 1.79
PTPRU-203ENST00000415600 KSR2Q6VAB6 950 aa26.2■■□□□ 1.79
PTPRU-203ENST00000415600 WDR63Q8IWG1 891 aa26.2■■□□□ 1.79
PTPRU-203ENST00000415600 FAM9BQ8IZU0 186 aa26.2■■□□□ 1.79
PTPRU-203ENST00000415600 TSPYL6Q8N831 410 aa26.2■■□□□ 1.79
PTPRU-203ENST00000415600 NSFL1CQ9UNZ2 370 aaKnown RBP26.2■■□□□ 1.79
PTPRU-203ENST00000415600 MAP3K2Q9Y2U5 619 aa26.2■■□□□ 1.79
PTPRU-203ENST00000415600 RPS8P62241 208 aaKnown RBP26.2■■□□□ 1.78
PTPRU-203ENST00000415600 USP50Q70EL3 339 aaPredicted RBP26.2■■□□□ 1.78
PTPRU-203ENST00000415600 DDX60Q8IY21 1712 aaKnown RBP26.2■■□□□ 1.78
PTPRU-203ENST00000415600 PASKQ96RG2 1323 aa26.19■■□□□ 1.78
PTPRU-203ENST00000415600 COL4A5P29400 1685 aa26.19■■□□□ 1.78
PTPRU-203ENST00000415600 EYA3Q99504 573 aa26.19■■□□□ 1.78
PTPRU-203ENST00000415600 PDE8AO60658 829 aa26.18■■□□□ 1.78
PTPRU-203ENST00000415600 SCNN1DP51172 638 aa26.18■■□□□ 1.78
PTPRU-203ENST00000415600 WASHC4Q2M389 1173 aa26.18■■□□□ 1.78
PTPRU-203ENST00000415600 CIAPIN1Q6FI81 312 aa26.18■■□□□ 1.78
PTPRU-203ENST00000415600 SLC51AQ86UW1 340 aa26.18■■□□□ 1.78
PTPRU-203ENST00000415600 CNTROBQ8N137 903 aa26.18■■□□□ 1.78
PTPRU-203ENST00000415600 CELF1Q92879 486 aaKnown RBP26.18■■□□□ 1.78
PTPRU-203ENST00000415600 CDHR2Q9BYE9 1310 aa26.17■■□□□ 1.78
PTPRU-203ENST00000415600 TMEM88BA6NKF7 163 aa26.17■■□□□ 1.78
PTPRU-203ENST00000415600 HNRNPUQ00839 825 aaKnown RBP eCLIP26.17■■□□□ 1.78
PTPRU-203ENST00000415600 BCL2L13Q9BXK5 485 aa26.17■■□□□ 1.78
PTPRU-203ENST00000415600 PI4KAP2A4QPH2 592 aa26.16■■□□□ 1.78
PTPRU-203ENST00000415600 CXCL9Q07325 125 aa26.16■■□□□ 1.78
PTPRU-203ENST00000415600 PI4KAP1Q8N8J0 262 aa26.16■■□□□ 1.78
PTPRU-203ENST00000415600 C6orf229H3BNL8 230 aa26.16■■□□□ 1.78
PTPRU-203ENST00000415600 ITGBL1O95965 494 aaPredicted RBP26.16■■□□□ 1.78
PTPRU-203ENST00000415600 SLC4A2P04920 1241 aa26.16■■□□□ 1.78
PTPRU-203ENST00000415600 ADARB2Q9NS39 739 aaKnown RBP26.16■■□□□ 1.78
PTPRU-203ENST00000415600 GPRC5DQ9NZD1 345 aa26.16■■□□□ 1.78
PTPRU-203ENST00000415600 EPS15P42566 896 aa26.15■■□□□ 1.78
PTPRU-203ENST00000415600 MAP1SQ66K74 1059 aaPredicted RBP26.15■■□□□ 1.78
PTPRU-203ENST00000415600 LRRC37AA6NMS7 1700 aa26.14■■□□□ 1.77
PTPRU-203ENST00000415600 FANCIQ9NVI1 1328 aa26.13■■□□□ 1.77
PTPRU-203ENST00000415600 ANKIB1Q9P2G1 1089 aa26.13■■□□□ 1.77
PTPRU-203ENST00000415600 SALL2Q9Y467 1007 aaPredicted RBP26.13■■□□□ 1.77
PTPRU-203ENST00000415600 IFFO2Q5TF58 517 aa26.12■■□□□ 1.77
PTPRU-203ENST00000415600 MYH16Q9H6N6 1097 aa26.12■■□□□ 1.77
PTPRU-203ENST00000415600 MKRN1Q9UHC7 482 aaKnown RBP26.12■■□□□ 1.77
PTPRU-203ENST00000415600 G3V3G9 751 aa26.12■■□□□ 1.77
PTPRU-203ENST00000415600 RAD17O75943 681 aa26.12■■□□□ 1.77
PTPRU-203ENST00000415600 GMPSP49915 693 aaPredicted RBP26.12■■□□□ 1.77
PTPRU-203ENST00000415600 DCAF8Q5TAQ9 597 aa26.12■■□□□ 1.77
PTPRU-203ENST00000415600 CDC5LQ99459 802 aaKnown RBP26.12■■□□□ 1.77
PTPRU-203ENST00000415600 ADAMTSL1Q8N6G6 1762 aa26.11■■□□□ 1.77
PTPRU-203ENST00000415600 GPSM2P81274 684 aa26.11■■□□□ 1.77
PTPRU-203ENST00000415600 ANKRD18AQ8IVF6 992 aa26.11■■□□□ 1.77
PTPRU-203ENST00000415600 ZC3H12CQ9C0D7 883 aaKnown RBP26.11■■□□□ 1.77
PTPRU-203ENST00000415600 GTF3C3Q9Y5Q9 886 aa26.11■■□□□ 1.77
PTPRU-203ENST00000415600 FLIIQ13045 1269 aa26.1■■□□□ 1.77
PTPRU-203ENST00000415600 TAF1P21675 1872 aa26.09■■□□□ 1.77
PTPRU-203ENST00000415600 CNTNAP1P78357 1384 aa26.09■■□□□ 1.77
PTPRU-203ENST00000415600 H7C1D1 291 aa26.09■■□□□ 1.77
PTPRU-203ENST00000415600 FKBP5Q13451 457 aaPredicted RBP26.09■■□□□ 1.77
PTPRU-203ENST00000415600 SEC31BQ9NQW1 1179 aa26.09■■□□□ 1.77
PTPRU-203ENST00000415600 PODXL2Q9NZ53 605 aa26.09■■□□□ 1.77
PTPRU-203ENST00000415600 GGA1Q9UJY5 639 aa26.09■■□□□ 1.77
PTPRU-203ENST00000415600 RIMBP2O15034 1052 aa26.08■■□□□ 1.77
PTPRU-203ENST00000415600 IGKV5-2P06315 115 aa26.08■■□□□ 1.77
PTPRU-203ENST00000415600 CTSWP56202 376 aa26.08■■□□□ 1.77
PTPRU-203ENST00000415600 TBC1D16Q8TBP0 767 aa26.08■■□□□ 1.77
PTPRU-203ENST00000415600 POLLQ9UGP5 575 aa26.08■■□□□ 1.77
PTPRU-203ENST00000415600 DUOX1Q9NRD9 1551 aa26.08■■□□□ 1.76
PTPRU-203ENST00000415600 NEURL1BA8MQ27 555 aa26.07■■□□□ 1.76
PTPRU-203ENST00000415600 UFL1O94874 794 aa26.07■■□□□ 1.76
PTPRU-203ENST00000415600 ZC3H15Q8WU90 426 aaKnown RBP26.07■■□□□ 1.76
PTPRU-203ENST00000415600 JARID2Q92833 1246 aaPredicted RBP26.07■■□□□ 1.76
PTPRU-203ENST00000415600 ABT1Q9ULW3 272 aaKnown RBP26.07■■□□□ 1.76
PTPRU-203ENST00000415600 RPS12P25398 132 aaKnown RBP26.06■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms