RNA–Protein interactions for RNA: ENST00000415022.1

CRAMP1-203, Transcript of cramped chromatin regulator homolog 1, humanhuman

TSL 3

Gene CRAMP1, Length 550 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1-203ENST00000415022 PIM2Q9P1W9 311 aa13.43□□□□□ -0.26
CRAMP1-203ENST00000415022 ABCC4O15439 1325 aa13.42□□□□□ -0.26
CRAMP1-203ENST00000415022 PTPRCP08575 1304 aa13.42□□□□□ -0.26
CRAMP1-203ENST00000415022 RNF123Q5XPI4 1314 aa13.42□□□□□ -0.26
CRAMP1-203ENST00000415022 CDHR2Q9BYE9 1310 aa13.42□□□□□ -0.26
CRAMP1-203ENST00000415022 NBPF7P0C2Y1 421 aaPredicted RBP13.42□□□□□ -0.26
CRAMP1-203ENST00000415022 FOXO4P98177 505 aa13.42□□□□□ -0.26
CRAMP1-203ENST00000415022 STYK1Q6J9G0 422 aa13.42□□□□□ -0.26
CRAMP1-203ENST00000415022 PRPF40BQ6NWY9 871 aaKnown RBP13.42□□□□□ -0.26
CRAMP1-203ENST00000415022 SLC4A10Q6U841 1118 aa13.42□□□□□ -0.26
CRAMP1-203ENST00000415022 ZNF622Q969S3 477 aaKnown RBP eCLIP13.42□□□□□ -0.26
CRAMP1-203ENST00000415022 MASTLQ96GX5 879 aa13.42□□□□□ -0.26
CRAMP1-203ENST00000415022 SEC31BQ9NQW1 1179 aa13.42□□□□□ -0.26
CRAMP1-203ENST00000415022 ZNF219Q9P2Y4 722 aaPredicted RBP13.42□□□□□ -0.26
CRAMP1-203ENST00000415022 PCNTO95613 3336 aa13.42□□□□□ -0.26
CRAMP1-203ENST00000415022 UTYO14607 1347 aa13.41□□□□□ -0.26
CRAMP1-203ENST00000415022 NFKBIEO00221 500 aa13.41□□□□□ -0.26
CRAMP1-203ENST00000415022 NPR1P16066 1061 aa13.41□□□□□ -0.26
CRAMP1-203ENST00000415022 GTF2E1P29083 439 aaPredicted RBP13.41□□□□□ -0.26
CRAMP1-203ENST00000415022 SF3B3Q15393 1217 aaKnown RBP13.41□□□□□ -0.26
CRAMP1-203ENST00000415022 DALRD3Q5D0E6 543 aaKnown RBP13.41□□□□□ -0.26
CRAMP1-203ENST00000415022 TTLL6Q8N841 843 aa13.41□□□□□ -0.26
CRAMP1-203ENST00000415022 RBM46Q8TBY0 533 aaKnown RBP13.41□□□□□ -0.26
CRAMP1-203ENST00000415022 CELF1Q92879 486 aaKnown RBP13.41□□□□□ -0.26
CRAMP1-203ENST00000415022 CCDC85AQ96PX6 553 aaPredicted RBP13.41□□□□□ -0.26
CRAMP1-203ENST00000415022 USP44Q9H0E7 712 aa13.41□□□□□ -0.26
CRAMP1-203ENST00000415022 TIAM2Q8IVF5 1701 aa13.4□□□□□ -0.26
CRAMP1-203ENST00000415022 C21orf2O43822 256 aa13.4□□□□□ -0.26
CRAMP1-203ENST00000415022 RASSF7Q02833 373 aa13.4□□□□□ -0.26
CRAMP1-203ENST00000415022 TTLL11Q8NHH1 800 aa13.4□□□□□ -0.26
CRAMP1-203ENST00000415022 SUCLG2Q96I99 432 aa13.4□□□□□ -0.26
CRAMP1-203ENST00000415022 WTIPA6NIX2 430 aaPredicted RBP13.39□□□□□ -0.27
CRAMP1-203ENST00000415022 NPHP1O15259 732 aa13.39□□□□□ -0.27
CRAMP1-203ENST00000415022 PLIN1O60240 522 aa13.39□□□□□ -0.27
CRAMP1-203ENST00000415022 ALDH1L1O75891 902 aa13.39□□□□□ -0.27
CRAMP1-203ENST00000415022 HSPA1AP0DMV8 641 aaKnown RBP13.39□□□□□ -0.27
CRAMP1-203ENST00000415022 HSPA1BP0DMV9 641 aaKnown RBP13.39□□□□□ -0.27
CRAMP1-203ENST00000415022 NEXNQ0ZGT2 675 aa13.39□□□□□ -0.27
CRAMP1-203ENST00000415022 ANKRD44Q8N8A2 993 aa13.39□□□□□ -0.27
CRAMP1-203ENST00000415022 CLUAP1Q96AJ1 413 aa13.39□□□□□ -0.27
CRAMP1-203ENST00000415022 NLRP3Q96P20 1036 aa13.39□□□□□ -0.27
CRAMP1-203ENST00000415022 PLA2G12BQ9BX93 195 aa13.39□□□□□ -0.27
CRAMP1-203ENST00000415022 SRCIN1Q9C0H9 1055 aa13.39□□□□□ -0.27
CRAMP1-203ENST00000415022 GRM8O00222 908 aa13.38□□□□□ -0.27
CRAMP1-203ENST00000415022 CSF1RP07333 972 aa13.38□□□□□ -0.27
CRAMP1-203ENST00000415022 FSTL1Q12841 308 aa13.38□□□□□ -0.27
CRAMP1-203ENST00000415022 C20orf194Q5TEA3 1177 aa13.38□□□□□ -0.27
CRAMP1-203ENST00000415022 ATF7IPQ6VMQ6 1270 aa13.38□□□□□ -0.27
CRAMP1-203ENST00000415022 ARHGAP45Q92619 1136 aa13.38□□□□□ -0.27
CRAMP1-203ENST00000415022 FRAT1Q92837 279 aaPredicted RBP13.38□□□□□ -0.27
CRAMP1-203ENST00000415022 CRAMP1Q96RY5 1269 aa13.38□□□□□ -0.27
CRAMP1-203ENST00000415022 GREM2Q9H772 168 aa13.38□□□□□ -0.27
CRAMP1-203ENST00000415022 NMRK2Q9NPI5 230 aa13.38□□□□□ -0.27
CRAMP1-203ENST00000415022 ZNF646O15015 1829 aaPredicted RBP13.38□□□□□ -0.27
CRAMP1-203ENST00000415022 PDE8AO60658 829 aa13.37□□□□□ -0.27
CRAMP1-203ENST00000415022 CTSWP56202 376 aa13.37□□□□□ -0.27
CRAMP1-203ENST00000415022 INTS3Q68E01 1043 aaKnown RBP13.37□□□□□ -0.27
CRAMP1-203ENST00000415022 TMEM57Q8N5G2 664 aa13.37□□□□□ -0.27
CRAMP1-203ENST00000415022 MEIS3Q99687 375 aa13.37□□□□□ -0.27
CRAMP1-203ENST00000415022 KIF16BQ96L93 1317 aa13.37□□□□□ -0.27
CRAMP1-203ENST00000415022 FAM161AQ3B820 660 aa13.36□□□□□ -0.27
CRAMP1-203ENST00000415022 PANK1Q8TE04 598 aa13.36□□□□□ -0.27
CRAMP1-203ENST00000415022 CNKSR1Q969H4 720 aa13.36□□□□□ -0.27
CRAMP1-203ENST00000415022 RCAN3Q9UKA8 241 aa13.36□□□□□ -0.27
CRAMP1-203ENST00000415022 RTL9Q8NET4 1388 aa13.35□□□□□ -0.27
CRAMP1-203ENST00000415022 SCN9AQ15858 1988 aa13.35□□□□□ -0.27
CRAMP1-203ENST00000415022 ARHGAP27Q6ZUM4 889 aa13.35□□□□□ -0.27
CRAMP1-203ENST00000415022 RPGRQ92834 1020 aaKnown RBP13.35□□□□□ -0.27
CRAMP1-203ENST00000415022 API5Q9BZZ5 524 aaKnown RBP13.35□□□□□ -0.27
CRAMP1-203ENST00000415022 BICC1Q9H694 974 aaKnown RBP13.35□□□□□ -0.27
CRAMP1-203ENST00000415022 PDZRN3Q9UPQ7 1066 aa13.35□□□□□ -0.27
CRAMP1-203ENST00000415022 PPEF1O14829 653 aaPredicted RBP13.34□□□□□ -0.27
CRAMP1-203ENST00000415022 GRAPQ13588 217 aa13.34□□□□□ -0.27
CRAMP1-203ENST00000415022 ZKSCAN2Q63HK3 967 aa13.34□□□□□ -0.27
CRAMP1-203ENST00000415022 GRAPLQ8TC17 118 aaPredicted RBP13.34□□□□□ -0.27
CRAMP1-203ENST00000415022 RBM17Q96I25 401 aaKnown RBP13.34□□□□□ -0.27
CRAMP1-203ENST00000415022 ALDH1B1P30837 517 aa13.33□□□□□ -0.28
CRAMP1-203ENST00000415022 RABL6Q3YEC7 729 aaPredicted RBP13.33□□□□□ -0.28
CRAMP1-203ENST00000415022 LMBR1LQ6UX01 489 aa13.33□□□□□ -0.28
CRAMP1-203ENST00000415022 ZNF594Q96JF6 807 aaPredicted RBP13.33□□□□□ -0.28
CRAMP1-203ENST00000415022 ATP6V0A2Q9Y487 856 aa13.33□□□□□ -0.28
CRAMP1-203ENST00000415022 RFX5P48382 616 aaPredicted RBP13.32□□□□□ -0.28
CRAMP1-203ENST00000415022 CCT4P50991 539 aaKnown RBP13.32□□□□□ -0.28
CRAMP1-203ENST00000415022 DDX46Q7L014 1031 aaKnown RBP13.32□□□□□ -0.28
CRAMP1-203ENST00000415022 GPR101Q96P66 508 aaPredicted RBP13.32□□□□□ -0.28
CRAMP1-203ENST00000415022 C9orf78Q9NZ63 289 aaPredicted RBP13.32□□□□□ -0.28
CRAMP1-203ENST00000415022 SNAP23O00161 211 aa13.31□□□□□ -0.28
CRAMP1-203ENST00000415022 ITGA6P23229 1130 aa13.31□□□□□ -0.28
CRAMP1-203ENST00000415022 RPS8P62241 208 aaKnown RBP13.31□□□□□ -0.28
CRAMP1-203ENST00000415022 GPSM2P81274 684 aa13.31□□□□□ -0.28
CRAMP1-203ENST00000415022 SP8Q8IXZ3 490 aa13.31□□□□□ -0.28
CRAMP1-203ENST00000415022 C16orf71Q8IYS4 520 aaPredicted RBP13.31□□□□□ -0.28
CRAMP1-203ENST00000415022 KLHDC4Q8TBB5 520 aa13.31□□□□□ -0.28
CRAMP1-203ENST00000415022 PUS3Q9BZE2 481 aaKnown RBP13.31□□□□□ -0.28
CRAMP1-203ENST00000415022 ZNF277Q9NRM2 450 aaPredicted RBP13.31□□□□□ -0.28
CRAMP1-203ENST00000415022 LTBP3Q9NS15 1303 aa13.31□□□□□ -0.28
CRAMP1-203ENST00000415022 ZBTB7BO15156 539 aaPredicted RBP13.3□□□□□ -0.28
CRAMP1-203ENST00000415022 BBOX1O75936 387 aa13.3□□□□□ -0.28
CRAMP1-203ENST00000415022 CCDC152Q4G0S7 254 aa13.3□□□□□ -0.28
CRAMP1-203ENST00000415022 C9orf131Q5VYM1 1079 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms