RNA–Protein interactions for RNA: ENST00000414317.6

SNCAIP-206, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SNCAIP, Length 1,591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-206ENST00000414317 GRAPLQ8TC17 118 aaPredicted RBP17.05■□□□□ 0.32
SNCAIP-206ENST00000414317 C9orf78Q9NZ63 289 aaPredicted RBP17.05■□□□□ 0.32
SNCAIP-206ENST00000414317 GRM8O00222 908 aa17.04■□□□□ 0.32
SNCAIP-206ENST00000414317 PPEF1O14829 653 aaPredicted RBP17.04■□□□□ 0.32
SNCAIP-206ENST00000414317 IPO8O15397 1037 aaKnown RBP17.04■□□□□ 0.32
SNCAIP-206ENST00000414317 BBOX1O75936 387 aa17.04■□□□□ 0.32
SNCAIP-206ENST00000414317 ARHGAP45Q92619 1136 aa17.04■□□□□ 0.32
SNCAIP-206ENST00000414317 NFKBIEO00221 500 aa17.03■□□□□ 0.32
SNCAIP-206ENST00000414317 CTSWP56202 376 aa17.03■□□□□ 0.32
SNCAIP-206ENST00000414317 RASSF7Q02833 373 aa17.03■□□□□ 0.32
SNCAIP-206ENST00000414317 CC2D2BQ6DHV5 1058 aa17.03■□□□□ 0.32
SNCAIP-206ENST00000414317 YTHDC1Q96MU7 727 aaKnown RBP17.03■□□□□ 0.32
SNCAIP-206ENST00000414317 PLA2G12BQ9BX93 195 aa17.03■□□□□ 0.32
SNCAIP-206ENST00000414317 TMX4Q9H1E5 349 aaPredicted RBP17.03■□□□□ 0.32
SNCAIP-206ENST00000414317 OLFM4Q6UX06 510 aa17.02■□□□□ 0.32
SNCAIP-206ENST00000414317 RTKN2Q8IZC4 609 aa17.02■□□□□ 0.32
SNCAIP-206ENST00000414317 TTLL11Q8NHH1 800 aa17.02■□□□□ 0.32
SNCAIP-206ENST00000414317 FRAT1Q92837 279 aaPredicted RBP17.02■□□□□ 0.32
SNCAIP-206ENST00000414317 CCDC85AQ96PX6 553 aaPredicted RBP17.02■□□□□ 0.32
SNCAIP-206ENST00000414317 TAOK3Q9H2K8 898 aa17.02■□□□□ 0.32
SNCAIP-206ENST00000414317 CCT4P50991 539 aaKnown RBP17.02■□□□□ 0.31
SNCAIP-206ENST00000414317 CELF1Q92879 486 aaKnown RBP17.02■□□□□ 0.31
SNCAIP-206ENST00000414317 ATP6V0A2Q9Y487 856 aa17.02■□□□□ 0.31
SNCAIP-206ENST00000414317 LTBP3Q9NS15 1303 aa17.01■□□□□ 0.31
SNCAIP-206ENST00000414317 LMNB1P20700 586 aa17.01■□□□□ 0.31
SNCAIP-206ENST00000414317 GRIPAP1Q4V328 841 aa17.01■□□□□ 0.31
SNCAIP-206ENST00000414317 C9orf131Q5VYM1 1079 aa17.01■□□□□ 0.31
SNCAIP-206ENST00000414317 TMC4Q7Z404 712 aa17.01■□□□□ 0.31
SNCAIP-206ENST00000414317 SEC31BQ9NQW1 1179 aa17.01■□□□□ 0.31
SNCAIP-206ENST00000414317 RPS8P62241 208 aaKnown RBP17■□□□□ 0.31
SNCAIP-206ENST00000414317 ATF7IPQ6VMQ6 1270 aa17■□□□□ 0.31
SNCAIP-206ENST00000414317 SP8Q8IXZ3 490 aa17■□□□□ 0.31
SNCAIP-206ENST00000414317 RNF181Q9P0P0 153 aa17■□□□□ 0.31
SNCAIP-206ENST00000414317 UTYO14607 1347 aa17■□□□□ 0.31
SNCAIP-206ENST00000414317 DICER1Q9UPY3 1922 aaKnown RBP17■□□□□ 0.31
SNCAIP-206ENST00000414317 RTL9Q8NET4 1388 aa16.99■□□□□ 0.31
SNCAIP-206ENST00000414317 NBPF7P0C2Y1 421 aaPredicted RBP16.99■□□□□ 0.31
SNCAIP-206ENST00000414317 FKBP4Q02790 459 aaKnown RBP eCLIP16.99■□□□□ 0.31
SNCAIP-206ENST00000414317 ZKSCAN2Q63HK3 967 aa16.99■□□□□ 0.31
SNCAIP-206ENST00000414317 GREM2Q9H772 168 aa16.99■□□□□ 0.31
SNCAIP-206ENST00000414317 SNED1Q8TER0 1413 aa16.99■□□□□ 0.31
SNCAIP-206ENST00000414317 CSF1RP07333 972 aa16.98■□□□□ 0.31
SNCAIP-206ENST00000414317 TRIM27P14373 513 aa16.98■□□□□ 0.31
SNCAIP-206ENST00000414317 PRELPP51888 382 aa16.98■□□□□ 0.31
SNCAIP-206ENST00000414317 CDC5LQ99459 802 aaKnown RBP16.98■□□□□ 0.31
SNCAIP-206ENST00000414317 COL4A1P02462 1669 aa16.98■□□□□ 0.31
SNCAIP-206ENST00000414317 FOXO4P98177 505 aa16.98■□□□□ 0.31
SNCAIP-206ENST00000414317 SLC51AQ86UW1 340 aa16.98■□□□□ 0.31
SNCAIP-206ENST00000414317 ANKRD18AQ8IVF6 992 aa16.98■□□□□ 0.31
SNCAIP-206ENST00000414317 PSMD1Q99460 953 aa16.98■□□□□ 0.31
SNCAIP-206ENST00000414317 USP44Q9H0E7 712 aa16.98■□□□□ 0.31
SNCAIP-206ENST00000414317 LRRC37AA6NMS7 1700 aa16.98■□□□□ 0.31
SNCAIP-206ENST00000414317 FAM161AQ3B820 660 aa16.97■□□□□ 0.31
SNCAIP-206ENST00000414317 SPEF2Q9C093 1822 aa16.97■□□□□ 0.31
SNCAIP-206ENST00000414317 ITGA6P23229 1130 aa16.96■□□□□ 0.31
SNCAIP-206ENST00000414317 EPHA10Q5JZY3 1008 aa16.96■□□□□ 0.31
SNCAIP-206ENST00000414317 INTS3Q68E01 1043 aaKnown RBP16.96■□□□□ 0.31
SNCAIP-206ENST00000414317 LMBR1LQ6UX01 489 aa16.96■□□□□ 0.31
SNCAIP-206ENST00000414317 MPNDQ8N594 471 aa16.96■□□□□ 0.31
SNCAIP-206ENST00000414317 CLUAP1Q96AJ1 413 aa16.96■□□□□ 0.31
SNCAIP-206ENST00000414317 SUCLG2Q96I99 432 aa16.96■□□□□ 0.31
SNCAIP-206ENST00000414317 ZNF277Q9NRM2 450 aaPredicted RBP16.96■□□□□ 0.31
SNCAIP-206ENST00000414317 RCAN3Q9UKA8 241 aa16.96■□□□□ 0.31
SNCAIP-206ENST00000414317 TNNQ9UQP3 1299 aa16.96■□□□□ 0.31
SNCAIP-206ENST00000414317 CHMP3Q9Y3E7 222 aa16.96■□□□□ 0.31
SNCAIP-206ENST00000414317 DPP8Q6V1X1 898 aaPredicted RBP16.95■□□□□ 0.3
SNCAIP-206ENST00000414317 TIAM2Q8IVF5 1701 aa16.95■□□□□ 0.3
SNCAIP-206ENST00000414317 ANKRD18BA2A2Z9 1011 aa16.94■□□□□ 0.3
SNCAIP-206ENST00000414317 KAZALD1Q96I82 304 aa16.94■□□□□ 0.3
SNCAIP-206ENST00000414317 UBTFL1P0CB47 393 aaPredicted RBP16.94■□□□□ 0.3
SNCAIP-206ENST00000414317 IGHMBP2P38935 993 aaKnown RBP16.94■□□□□ 0.3
SNCAIP-206ENST00000414317 IARSP41252 1262 aaKnown RBP16.94■□□□□ 0.3
SNCAIP-206ENST00000414317 IFIT5Q13325 482 aaKnown RBP16.94■□□□□ 0.3
SNCAIP-206ENST00000414317 FTSJ3Q8IY81 847 aaKnown RBP16.94■□□□□ 0.3
SNCAIP-206ENST00000414317 SUPT20HQ8NEM7 779 aa16.94■□□□□ 0.3
SNCAIP-206ENST00000414317 BICC1Q9H694 974 aaKnown RBP16.94■□□□□ 0.3
SNCAIP-206ENST00000414317 NSFL1CQ9UNZ2 370 aaKnown RBP16.94■□□□□ 0.3
SNCAIP-206ENST00000414317 ZC3H4Q9UPT8 1303 aaKnown RBP16.93■□□□□ 0.3
SNCAIP-206ENST00000414317 CCDC57Q2TAC2 916 aa16.93■□□□□ 0.3
SNCAIP-206ENST00000414317 ZNF784Q8NCA9 323 aaPredicted RBP16.93■□□□□ 0.3
SNCAIP-206ENST00000414317 RTFDC1Q9BY42 306 aaPredicted RBP16.93■□□□□ 0.3
SNCAIP-206ENST00000414317 BSDC1Q9NW68 430 aaPredicted RBP16.93■□□□□ 0.3
SNCAIP-206ENST00000414317 GPSM2P81274 684 aa16.92■□□□□ 0.3
SNCAIP-206ENST00000414317 RABL6Q3YEC7 729 aaPredicted RBP16.92■□□□□ 0.3
SNCAIP-206ENST00000414317 DZIP1LQ8IYY4 767 aaKnown RBP16.92■□□□□ 0.3
SNCAIP-206ENST00000414317 MPHOSPH8Q99549 860 aa16.92■□□□□ 0.3
SNCAIP-206ENST00000414317 HDAC5Q9UQL6 1122 aa16.92■□□□□ 0.3
SNCAIP-206ENST00000414317 TMEM57Q8N5G2 664 aa16.91■□□□□ 0.3
SNCAIP-206ENST00000414317 MEIS3Q99687 375 aa16.91■□□□□ 0.3
SNCAIP-206ENST00000414317 VPS33BQ9H267 617 aa16.91■□□□□ 0.3
SNCAIP-206ENST00000414317 LTBP1Q14766 1721 aa16.9■□□□□ 0.3
SNCAIP-206ENST00000414317 TAF7LQ5H9L4 462 aa16.9■□□□□ 0.3
SNCAIP-206ENST00000414317 LARGE2Q8N3Y3 721 aa16.9■□□□□ 0.3
SNCAIP-206ENST00000414317 ANKRD44Q8N8A2 993 aa16.9■□□□□ 0.3
SNCAIP-206ENST00000414317 PODXL2Q9NZ53 605 aa16.9■□□□□ 0.3
SNCAIP-206ENST00000414317 ANKIB1Q9P2G1 1089 aa16.9■□□□□ 0.3
SNCAIP-206ENST00000414317 DUOX1Q9NRD9 1551 aa16.9■□□□□ 0.3
SNCAIP-206ENST00000414317 C6orf229H3BNL8 230 aa16.89■□□□□ 0.3
SNCAIP-206ENST00000414317 PPIP5K2O43314 1243 aa16.89■□□□□ 0.3
SNCAIP-206ENST00000414317 GNAI3P08754 354 aa16.89■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms