RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 DKK1O94907 266 aa4.85□□□□□ -1.63
SF3B1-203ENST00000414174 TATP17735 454 aaPredicted RBP4.85□□□□□ -1.63
SF3B1-203ENST00000414174 IRAK1P51617 712 aa4.85□□□□□ -1.63
SF3B1-203ENST00000414174 FAM193AP78312 1265 aa4.85□□□□□ -1.63
SF3B1-203ENST00000414174 CLDN10P78369 228 aa4.85□□□□□ -1.63
SF3B1-203ENST00000414174 EML3Q32P44 896 aa4.85□□□□□ -1.63
SF3B1-203ENST00000414174 GORABQ5T7V8 394 aa4.85□□□□□ -1.63
SF3B1-203ENST00000414174 HDGFL1Q5TGJ6 251 aa4.85□□□□□ -1.63
SF3B1-203ENST00000414174 ILDR2Q71H61 639 aa4.85□□□□□ -1.63
SF3B1-203ENST00000414174 SERBP1Q8NC51 408 aaKnown RBP eCLIP4.85□□□□□ -1.63
SF3B1-203ENST00000414174 PCMTD2Q9NV79 361 aa4.85□□□□□ -1.63
SF3B1-203ENST00000414174 PPME1Q9Y570 386 aa4.85□□□□□ -1.63
SF3B1-203ENST00000414174 GJA3Q9Y6H8 435 aa4.85□□□□□ -1.63
SF3B1-203ENST00000414174 USP17L3A6NCW0 530 aa4.84□□□□□ -1.63
SF3B1-203ENST00000414174 USP17L4A6NCW7 530 aa4.84□□□□□ -1.63
SF3B1-203ENST00000414174 PATL2C9JE40 543 aaKnown RBP4.84□□□□□ -1.63
SF3B1-203ENST00000414174 CDK2AP1O14519 115 aa4.84□□□□□ -1.63
SF3B1-203ENST00000414174 CLGNO14967 610 aa4.84□□□□□ -1.63
SF3B1-203ENST00000414174 MARCH6O60337 910 aa4.84□□□□□ -1.63
SF3B1-203ENST00000414174 TAL1P17542 331 aaPredicted RBP4.84□□□□□ -1.63
SF3B1-203ENST00000414174 TXLNAP40222 546 aa4.84□□□□□ -1.63
SF3B1-203ENST00000414174 SH3PXD2AQ5TCZ1 1133 aa4.84□□□□□ -1.63
SF3B1-203ENST00000414174 USP17L2Q6R6M4 530 aa4.84□□□□□ -1.63
SF3B1-203ENST00000414174 USP17L1Q7RTZ2 530 aa4.84□□□□□ -1.63
SF3B1-203ENST00000414174 PLEKHM2Q8IWE5 1019 aa4.84□□□□□ -1.63
SF3B1-203ENST00000414174 SCHIP1Q9P0W5 487 aaPredicted RBP4.84□□□□□ -1.63
SF3B1-203ENST00000414174 NOD1Q9Y239 953 aa4.84□□□□□ -1.63
SF3B1-203ENST00000414174 RNF114Q9Y508 228 aa4.84□□□□□ -1.63
SF3B1-203ENST00000414174 PARP3Q9Y6F1 533 aa4.84□□□□□ -1.63
SF3B1-203ENST00000414174 ATP9BO43861 1147 aa4.83□□□□□ -1.64
SF3B1-203ENST00000414174 LILRB5O75023 590 aa4.83□□□□□ -1.64
SF3B1-203ENST00000414174 ERCC3P19447 782 aa4.83□□□□□ -1.64
SF3B1-203ENST00000414174 RAC1P63000 192 aa4.83□□□□□ -1.64
SF3B1-203ENST00000414174 TBCELQ5QJ74 424 aa4.83□□□□□ -1.64
SF3B1-203ENST00000414174 NME8Q8N427 588 aa4.83□□□□□ -1.64
SF3B1-203ENST00000414174 C7orf43Q8WVR3 580 aa4.83□□□□□ -1.64
SF3B1-203ENST00000414174 ZNF622Q969S3 477 aaKnown RBP eCLIP4.83□□□□□ -1.644e-7■■■□□ 15.1
SF3B1-203ENST00000414174 YTHDC1Q96MU7 727 aaKnown RBP4.83□□□□□ -1.64
SF3B1-203ENST00000414174 TERF2IPQ9NYB0 399 aa4.83□□□□□ -1.64
SF3B1-203ENST00000414174 SUGT1Q9Y2Z0 365 aa4.83□□□□□ -1.64
SF3B1-203ENST00000414174 UNCXA6NJT0 531 aa4.82□□□□□ -1.64
SF3B1-203ENST00000414174 ADH7P40394 386 aa4.82□□□□□ -1.64
SF3B1-203ENST00000414174 PROSER2Q86WR7 435 aaPredicted RBP4.82□□□□□ -1.64
SF3B1-203ENST00000414174 TNS4Q8IZW8 715 aa4.82□□□□□ -1.64
SF3B1-203ENST00000414174 TPCN2Q8NHX9 752 aa4.82□□□□□ -1.64
SF3B1-203ENST00000414174 SERPINA10Q9UK55 444 aa4.82□□□□□ -1.64
SF3B1-203ENST00000414174 ANKRD62A6NC57 917 aa4.81□□□□□ -1.64
SF3B1-203ENST00000414174 HMGB1P1B2RPK0 211 aaPredicted RBP4.81□□□□□ -1.64
SF3B1-203ENST00000414174 LZTS3O60299 673 aaPredicted RBP4.81□□□□□ -1.64
SF3B1-203ENST00000414174 CD97P48960 835 aa4.81□□□□□ -1.64
SF3B1-203ENST00000414174 MMP14P50281 582 aa4.81□□□□□ -1.64
SF3B1-203ENST00000414174 NEUROD1Q13562 356 aa4.81□□□□□ -1.64
SF3B1-203ENST00000414174 POTEAQ6S8J7 498 aa4.81□□□□□ -1.64
SF3B1-203ENST00000414174 SHISA2Q6UWI4 295 aa4.81□□□□□ -1.64
SF3B1-203ENST00000414174 SLC9A9Q8IVB4 645 aa4.81□□□□□ -1.64
SF3B1-203ENST00000414174 GLMNQ92990 594 aa4.81□□□□□ -1.64
SF3B1-203ENST00000414174 UBA5Q9GZZ9 404 aa4.81□□□□□ -1.64
SF3B1-203ENST00000414174 CHMP4BQ9H444 224 aaKnown RBP4.81□□□□□ -1.64
SF3B1-203ENST00000414174 CABP1Q9NZU7 370 aa4.81□□□□□ -1.64
SF3B1-203ENST00000414174 EML1O00423 815 aa4.8□□□□□ -1.64
SF3B1-203ENST00000414174 PSME1Q06323 249 aa4.8□□□□□ -1.64
SF3B1-203ENST00000414174 RALBP1Q15311 655 aa4.8□□□□□ -1.64
SF3B1-203ENST00000414174 TEAD4Q15561 434 aa4.8□□□□□ -1.64
SF3B1-203ENST00000414174 CCDC102BQ68D86 513 aa4.8□□□□□ -1.64
SF3B1-203ENST00000414174 TSHZ1Q6ZSZ6 1077 aa4.8□□□□□ -1.64
SF3B1-203ENST00000414174 WFDC12Q8WWY7 111 aa4.8□□□□□ -1.64
SF3B1-203ENST00000414174 DRC1Q96MC2 740 aa4.8□□□□□ -1.64
SF3B1-203ENST00000414174 SLC30A3Q99726 388 aa4.8□□□□□ -1.64
SF3B1-203ENST00000414174 HIRIP3Q9BW71 556 aaPredicted RBP4.8□□□□□ -1.64
SF3B1-203ENST00000414174 TSPAN10Q9H1Z9 355 aaPredicted RBP4.8□□□□□ -1.64
SF3B1-203ENST00000414174 USP21Q9UK80 565 aa4.8□□□□□ -1.64
SF3B1-203ENST00000414174 MAFBQ9Y5Q3 323 aaPredicted RBP4.8□□□□□ -1.64
SF3B1-203ENST00000414174 C21orf2O43822 256 aa4.79□□□□□ -1.64
SF3B1-203ENST00000414174 MYBPC2Q14324 1141 aa4.79□□□□□ -1.64
SF3B1-203ENST00000414174 PRR23CQ6ZRP0 262 aa4.79□□□□□ -1.64
SF3B1-203ENST00000414174 APBB1IPQ7Z5R6 666 aaPredicted RBP4.79□□□□□ -1.64
SF3B1-203ENST00000414174 FAM9BQ8IZU0 186 aa4.79□□□□□ -1.64
SF3B1-203ENST00000414174 FMR1NBQ8N0W7 255 aaPredicted RBP4.79□□□□□ -1.64
SF3B1-203ENST00000414174 SIX5Q8N196 739 aa4.79□□□□□ -1.64
SF3B1-203ENST00000414174 OGFOD1Q8N543 542 aa4.79□□□□□ -1.64
SF3B1-203ENST00000414174 L3MBTL2Q969R5 705 aa4.79□□□□□ -1.64
SF3B1-203ENST00000414174 CCDC97Q96F63 343 aaPredicted RBP4.79□□□□□ -1.64
SF3B1-203ENST00000414174 SLC52A1Q9NWF4 448 aa4.79□□□□□ -1.64
SF3B1-203ENST00000414174 TFIP11Q9UBB9 837 aaKnown RBP4.79□□□□□ -1.64
SF3B1-203ENST00000414174 MKRN1Q9UHC7 482 aaKnown RBP4.79□□□□□ -1.64
SF3B1-203ENST00000414174 GPC6Q9Y625 555 aaPredicted RBP4.79□□□□□ -1.64
SF3B1-203ENST00000414174 OAS3Q9Y6K5 1087 aaKnown RBP4.79□□□□□ -1.64
SF3B1-203ENST00000414174 SFI1A8K8P3 1242 aa4.78□□□□□ -1.64
SF3B1-203ENST00000414174 BACH1O14867 736 aa4.78□□□□□ -1.64
SF3B1-203ENST00000414174 SSTR4P31391 388 aa4.78□□□□□ -1.64
SF3B1-203ENST00000414174 NOS2P35228 1153 aa4.78□□□□□ -1.64
SF3B1-203ENST00000414174 KCNA1Q09470 495 aa4.78□□□□□ -1.64
SF3B1-203ENST00000414174 SFSWAPQ12872 951 aaKnown RBP4.78□□□□□ -1.64
SF3B1-203ENST00000414174 BICDL1Q6ZP65 573 aa4.78□□□□□ -1.64
SF3B1-203ENST00000414174 RINLQ6ZS11 566 aa4.78□□□□□ -1.64
SF3B1-203ENST00000414174 TRIM50Q86XT4 487 aa4.78□□□□□ -1.64
SF3B1-203ENST00000414174 DTWD1Q8N5C7 304 aa4.78□□□□□ -1.64
SF3B1-203ENST00000414174 TSEN2Q8NCE0 465 aaKnown RBP4.78□□□□□ -1.64
SF3B1-203ENST00000414174 MICAL1Q8TDZ2 1067 aa4.78□□□□□ -1.64
SF3B1-203ENST00000414174 ZNF594Q96JF6 807 aaPredicted RBP4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms