RNA–Protein interactions for RNA: ENST00000414057.6

SCAMP4-204, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 1 (best)

Gene SCAMP4, Length 1,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-204ENST00000414057 ATP5J2-PTCD1G3V325 749 aa21.59■■□□□ 1.05
SCAMP4-204ENST00000414057 GRAPQ13588 217 aa21.59■■□□□ 1.05
SCAMP4-204ENST00000414057 LDHDQ86WU2 507 aa21.59■■□□□ 1.05
SCAMP4-204ENST00000414057 C8orf58Q8NAV2 365 aa21.59■■□□□ 1.05
SCAMP4-204ENST00000414057 GRAPLQ8TC17 118 aaPredicted RBP21.59■■□□□ 1.05
SCAMP4-204ENST00000414057 KLRG1Q96E93 195 aa21.59■■□□□ 1.05
SCAMP4-204ENST00000414057 TAF1DQ9H5J8 278 aaPredicted RBP21.59■■□□□ 1.05
SCAMP4-204ENST00000414057 PNMA8AQ86V59 439 aaPredicted RBP21.58■■□□□ 1.05
SCAMP4-204ENST00000414057 NIM1KQ8IY84 436 aa21.58■■□□□ 1.05
SCAMP4-204ENST00000414057 PPIP5K2O43314 1243 aa21.58■■□□□ 1.04
SCAMP4-204ENST00000414057 CT47B1P0C2W7 299 aaPredicted RBP21.58■■□□□ 1.04
SCAMP4-204ENST00000414057 DPP8Q6V1X1 898 aaPredicted RBP21.58■■□□□ 1.04
SCAMP4-204ENST00000414057 FAM89AQ96GI7 184 aa21.58■■□□□ 1.04
SCAMP4-204ENST00000414057 HTRA3P83110 453 aa21.57■■□□□ 1.04
SCAMP4-204ENST00000414057 MPNDQ8N594 471 aa21.57■■□□□ 1.04
SCAMP4-204ENST00000414057 RTFDC1Q9BY42 306 aaPredicted RBP21.57■■□□□ 1.04
SCAMP4-204ENST00000414057 PHAXQ9H814 394 aaKnown RBP21.57■■□□□ 1.04
SCAMP4-204ENST00000414057 SCN4AP35499 1836 aa21.56■■□□□ 1.04
SCAMP4-204ENST00000414057 EPHX2P34913 555 aa21.56■■□□□ 1.04
SCAMP4-204ENST00000414057 SF3B3Q15393 1217 aaKnown RBP21.56■■□□□ 1.04
SCAMP4-204ENST00000414057 STK31Q9BXU1 1019 aa21.56■■□□□ 1.04
SCAMP4-204ENST00000414057 IRS4O14654 1257 aaPredicted RBP21.55■■□□□ 1.04
SCAMP4-204ENST00000414057 LMOD1P29536 600 aaPredicted RBP21.55■■□□□ 1.04
SCAMP4-204ENST00000414057 EAPPQ56P03 285 aaPredicted RBP21.55■■□□□ 1.04
SCAMP4-204ENST00000414057 ZBTB38Q8NAP3 1195 aaPredicted RBP21.55■■□□□ 1.04
SCAMP4-204ENST00000414057 GJA3Q9Y6H8 435 aa21.55■■□□□ 1.04
SCAMP4-204ENST00000414057 FANCIQ9NVI1 1328 aa21.54■■□□□ 1.04
SCAMP4-204ENST00000414057 CCDC191Q8NCU4 936 aa21.54■■□□□ 1.04
SCAMP4-204ENST00000414057 MYD88Q99836 296 aa21.54■■□□□ 1.04
SCAMP4-204ENST00000414057 CLEC11AQ9Y240 323 aa21.54■■□□□ 1.04
SCAMP4-204ENST00000414057 POTEIP0CG38 1075 aa21.53■■□□□ 1.04
SCAMP4-204ENST00000414057 POTEJP0CG39 1038 aa21.53■■□□□ 1.04
SCAMP4-204ENST00000414057 AOC3Q16853 763 aa21.53■■□□□ 1.04
SCAMP4-204ENST00000414057 ERICH6BQ5W0A0 696 aa21.53■■□□□ 1.04
SCAMP4-204ENST00000414057 TSR2Q969E8 191 aaKnown RBP21.53■■□□□ 1.04
SCAMP4-204ENST00000414057 ZNF428Q96B54 188 aa21.53■■□□□ 1.04
SCAMP4-204ENST00000414057 RTL5Q5HYW3 569 aaPredicted RBP21.52■■□□□ 1.04
SCAMP4-204ENST00000414057 METTL22Q9BUU2 404 aaPredicted RBP21.52■■□□□ 1.04
SCAMP4-204ENST00000414057 CWC25Q9NXE8 425 aaPredicted RBP21.52■■□□□ 1.04
SCAMP4-204ENST00000414057 ZNRF3Q9ULT6 936 aa21.52■■□□□ 1.04
SCAMP4-204ENST00000414057 TWISTNBQ3B726 338 aaPredicted RBP21.52■■□□□ 1.03
SCAMP4-204ENST00000414057 TSPYL6Q8N831 410 aa21.52■■□□□ 1.03
SCAMP4-204ENST00000414057 JMYQ8N9B5 988 aa21.52■■□□□ 1.03
SCAMP4-204ENST00000414057 CREBZFQ9NS37 354 aa21.51■■□□□ 1.03
SCAMP4-204ENST00000414057 PCCAP05165 728 aaPredicted RBP21.5■■□□□ 1.03
SCAMP4-204ENST00000414057 RRP1P56182 461 aaKnown RBP21.5■■□□□ 1.03
SCAMP4-204ENST00000414057 KIAA2012Q0VF49 1180 aa21.5■■□□□ 1.03
SCAMP4-204ENST00000414057 NEXNQ0ZGT2 675 aa21.5■■□□□ 1.03
SCAMP4-204ENST00000414057 KSR2Q6VAB6 950 aa21.5■■□□□ 1.03
SCAMP4-204ENST00000414057 MAP3K2Q9Y2U5 619 aa21.5■■□□□ 1.03
SCAMP4-204ENST00000414057 SLC51AQ86UW1 340 aa21.49■■□□□ 1.03
SCAMP4-204ENST00000414057 CELF1Q92879 486 aaKnown RBP21.49■■□□□ 1.03
SCAMP4-204ENST00000414057 LAMB2P55268 1798 aa21.48■■□□□ 1.03
SCAMP4-204ENST00000414057 PDE8AO60658 829 aa21.48■■□□□ 1.03
SCAMP4-204ENST00000414057 RPS8P62241 208 aaKnown RBP21.48■■□□□ 1.03
SCAMP4-204ENST00000414057 CCDC152Q4G0S7 254 aa21.48■■□□□ 1.03
SCAMP4-204ENST00000414057 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.48■■□□□ 1.03
SCAMP4-204ENST00000414057 NSFL1CQ9UNZ2 370 aaKnown RBP21.48■■□□□ 1.03
SCAMP4-204ENST00000414057 USP50Q70EL3 339 aaPredicted RBP21.47■■□□□ 1.03
SCAMP4-204ENST00000414057 COL4A5P29400 1685 aa21.47■■□□□ 1.03
SCAMP4-204ENST00000414057 PASKQ96RG2 1323 aa21.47■■□□□ 1.03
SCAMP4-204ENST00000414057 PI4KAP2A4QPH2 592 aa21.46■■□□□ 1.03
SCAMP4-204ENST00000414057 SCNN1DP51172 638 aa21.46■■□□□ 1.03
SCAMP4-204ENST00000414057 TNIP1Q15025 636 aa21.46■■□□□ 1.03
SCAMP4-204ENST00000414057 CIAPIN1Q6FI81 312 aa21.46■■□□□ 1.03
SCAMP4-204ENST00000414057 CNTROBQ8N137 903 aa21.46■■□□□ 1.03
SCAMP4-204ENST00000414057 PI4KAP1Q8N8J0 262 aa21.46■■□□□ 1.03
SCAMP4-204ENST00000414057 ITGBL1O95965 494 aaPredicted RBP21.45■■□□□ 1.03
SCAMP4-204ENST00000414057 SLC4A2P04920 1241 aa21.45■■□□□ 1.03
SCAMP4-204ENST00000414057 CXCL9Q07325 125 aa21.45■■□□□ 1.03
SCAMP4-204ENST00000414057 WASHC4Q2M389 1173 aa21.45■■□□□ 1.03
SCAMP4-204ENST00000414057 DDX60Q8IY21 1712 aaKnown RBP21.45■■□□□ 1.03
SCAMP4-204ENST00000414057 EYA3Q99504 573 aa21.45■■□□□ 1.03
SCAMP4-204ENST00000414057 CDHR2Q9BYE9 1310 aa21.44■■□□□ 1.02
SCAMP4-204ENST00000414057 TMEM88BA6NKF7 163 aa21.44■■□□□ 1.02
SCAMP4-204ENST00000414057 C6orf229H3BNL8 230 aa21.44■■□□□ 1.02
SCAMP4-204ENST00000414057 EPS15P42566 896 aa21.44■■□□□ 1.02
SCAMP4-204ENST00000414057 EXOSC9Q06265 439 aaKnown RBP21.44■■□□□ 1.02
SCAMP4-204ENST00000414057 ADARB2Q9NS39 739 aaKnown RBP21.44■■□□□ 1.02
SCAMP4-204ENST00000414057 GPRC5DQ9NZD1 345 aa21.44■■□□□ 1.02
SCAMP4-204ENST00000414057 MAP1SQ66K74 1059 aaPredicted RBP21.43■■□□□ 1.02
SCAMP4-204ENST00000414057 BCL2L13Q9BXK5 485 aa21.43■■□□□ 1.02
SCAMP4-204ENST00000414057 RAD17O75943 681 aa21.41■■□□□ 1.02
SCAMP4-204ENST00000414057 RARSP54136 660 aaKnown RBP21.41■■□□□ 1.02
SCAMP4-204ENST00000414057 GPSM2P81274 684 aa21.41■■□□□ 1.02
SCAMP4-204ENST00000414057 LRRC37AA6NMS7 1700 aa21.4■■□□□ 1.02
SCAMP4-204ENST00000414057 IGKV5-2P06315 115 aa21.4■■□□□ 1.02
SCAMP4-204ENST00000414057 GMPSP49915 693 aaPredicted RBP21.4■■□□□ 1.02
SCAMP4-204ENST00000414057 FLIIQ13045 1269 aa21.4■■□□□ 1.02
SCAMP4-204ENST00000414057 CDC5LQ99459 802 aaKnown RBP21.4■■□□□ 1.02
SCAMP4-204ENST00000414057 ZC3H12CQ9C0D7 883 aaKnown RBP21.4■■□□□ 1.02
SCAMP4-204ENST00000414057 SEC31BQ9NQW1 1179 aa21.4■■□□□ 1.02
SCAMP4-204ENST00000414057 PODXL2Q9NZ53 605 aa21.4■■□□□ 1.02
SCAMP4-204ENST00000414057 ANKIB1Q9P2G1 1089 aa21.4■■□□□ 1.02
SCAMP4-204ENST00000414057 ADAMTSL1Q8N6G6 1762 aa21.4■■□□□ 1.02
SCAMP4-204ENST00000414057 FKBP5Q13451 457 aaPredicted RBP21.39■■□□□ 1.02
SCAMP4-204ENST00000414057 ANKRD18AQ8IVF6 992 aa21.39■■□□□ 1.02
SCAMP4-204ENST00000414057 TBC1D16Q8TBP0 767 aa21.39■■□□□ 1.02
SCAMP4-204ENST00000414057 POLLQ9UGP5 575 aa21.39■■□□□ 1.02
SCAMP4-204ENST00000414057 MKRN1Q9UHC7 482 aaKnown RBP21.39■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms