RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 MDFIQ99750 246 aa6.85□□□□□ -1.31
HMGB1P11-201ENST00000413899 ZFATQ9P243 1243 aa6.85□□□□□ -1.31
HMGB1P11-201ENST00000413899 KLF15Q9UIH9 416 aa6.85□□□□□ -1.31
HMGB1P11-201ENST00000413899 SASH3O75995 380 aa6.84□□□□□ -1.31
HMGB1P11-201ENST00000413899 ADAMTS2O95450 1211 aa6.84□□□□□ -1.31
HMGB1P11-201ENST00000413899 NFKB1P19838 968 aa6.84□□□□□ -1.31
HMGB1P11-201ENST00000413899 TMC7Q7Z402 723 aa6.84□□□□□ -1.31
HMGB1P11-201ENST00000413899 SYT9Q86SS6 491 aa6.84□□□□□ -1.31
HMGB1P11-201ENST00000413899 ZSCAN29Q8IWY8 852 aaPredicted RBP6.84□□□□□ -1.31
HMGB1P11-201ENST00000413899 GOLGA6L1Q8N7Z2 621 aa6.84□□□□□ -1.31
HMGB1P11-201ENST00000413899 BHMTQ93088 406 aa6.84□□□□□ -1.31
HMGB1P11-201ENST00000413899 ALKBH8Q96BT7 664 aaKnown RBP6.84□□□□□ -1.31
HMGB1P11-201ENST00000413899 PNMA5Q96PV4 448 aa6.84□□□□□ -1.31
HMGB1P11-201ENST00000413899 OXCT2Q9BYC2 517 aaPredicted RBP6.84□□□□□ -1.31
HMGB1P11-201ENST00000413899 ELP3Q9H9T3 547 aa6.84□□□□□ -1.31
HMGB1P11-201ENST00000413899 LRRC4BQ9NT99 713 aa6.84□□□□□ -1.31
HMGB1P11-201ENST00000413899 GDF2Q9UK05 429 aaPredicted RBP6.84□□□□□ -1.31
HMGB1P11-201ENST00000413899 ADARB2-AS1A8MUL3 147 aa6.83□□□□□ -1.32
HMGB1P11-201ENST00000413899 GPR182O15218 404 aa6.83□□□□□ -1.32
HMGB1P11-201ENST00000413899 RARAP10276 462 aa6.83□□□□□ -1.32
HMGB1P11-201ENST00000413899 TARSP26639 723 aaKnown RBP6.83□□□□□ -1.32
HMGB1P11-201ENST00000413899 SOX18P35713 384 aa6.83□□□□□ -1.32
HMGB1P11-201ENST00000413899 DSC3Q14574 896 aa6.83□□□□□ -1.32
HMGB1P11-201ENST00000413899 C8orf34Q49A92 452 aa6.83□□□□□ -1.32
HMGB1P11-201ENST00000413899 DNAJC14Q6Y2X3 702 aaPredicted RBP6.83□□□□□ -1.32
HMGB1P11-201ENST00000413899 SLCO4C1Q6ZQN7 724 aa6.83□□□□□ -1.32
HMGB1P11-201ENST00000413899 ZNF438Q7Z4V0 828 aa6.83□□□□□ -1.32
HMGB1P11-201ENST00000413899 RAB44Q7Z6P3 723 aaPredicted RBP6.83□□□□□ -1.32
HMGB1P11-201ENST00000413899 TNFRSF25Q93038 417 aa6.83□□□□□ -1.32
HMGB1P11-201ENST00000413899 ACDQ96AP0 544 aa6.83□□□□□ -1.32
HMGB1P11-201ENST00000413899 TNFRSF21O75509 655 aa6.82□□□□□ -1.32
HMGB1P11-201ENST00000413899 ERCC3P19447 782 aa6.82□□□□□ -1.32
HMGB1P11-201ENST00000413899 PCBP4P57723 403 aaKnown RBP6.82□□□□□ -1.32
HMGB1P11-201ENST00000413899 OR13H1Q8NG92 308 aa6.82□□□□□ -1.32
HMGB1P11-201ENST00000413899 ABI2Q9NYB9 513 aaPredicted RBP6.82□□□□□ -1.32
HMGB1P11-201ENST00000413899 TLR7Q9NYK1 1049 aaKnown RBP6.82□□□□□ -1.32
HMGB1P11-201ENST00000413899 TMEM63CQ9P1W3 806 aa6.82□□□□□ -1.32
HMGB1P11-201ENST00000413899 GGA1Q9UJY5 639 aa6.82□□□□□ -1.32
HMGB1P11-201ENST00000413899 A6NHS1 94 aa6.81□□□□□ -1.32
HMGB1P11-201ENST00000413899 TREHO43280 583 aa6.81□□□□□ -1.32
HMGB1P11-201ENST00000413899 MMP20O60882 483 aa6.81□□□□□ -1.32
HMGB1P11-201ENST00000413899 NEFLP07196 543 aa6.81□□□□□ -1.32
HMGB1P11-201ENST00000413899 COL19A1Q14993 1142 aa6.81□□□□□ -1.32
HMGB1P11-201ENST00000413899 TTC39BQ5VTQ0 682 aaPredicted RBP6.81□□□□□ -1.32
HMGB1P11-201ENST00000413899 DHX32Q7L7V1 743 aaKnown RBP6.81□□□□□ -1.32
HMGB1P11-201ENST00000413899 KRT25Q7Z3Z0 450 aa6.81□□□□□ -1.32
HMGB1P11-201ENST00000413899 FCHSD1Q86WN1 690 aa6.81□□□□□ -1.32
HMGB1P11-201ENST00000413899 TRPM4Q8TD43 1214 aa6.81□□□□□ -1.32
HMGB1P11-201ENST00000413899 SNX29Q8TEQ0 813 aa6.81□□□□□ -1.32
HMGB1P11-201ENST00000413899 NEURL1BA8MQ27 555 aa6.8□□□□□ -1.32
HMGB1P11-201ENST00000413899 NRLP54845 237 aa6.8□□□□□ -1.32
HMGB1P11-201ENST00000413899 GPLD1P80108 840 aa6.8□□□□□ -1.32
HMGB1P11-201ENST00000413899 PCSK7Q16549 785 aa6.8□□□□□ -1.32
HMGB1P11-201ENST00000413899 TMC1Q8TDI8 760 aa6.8□□□□□ -1.32
HMGB1P11-201ENST00000413899 OIP5O43482 229 aa6.79□□□□□ -1.32
HMGB1P11-201ENST00000413899 PSAPP07602 524 aa6.79□□□□□ -1.32
HMGB1P11-201ENST00000413899 BCRP11274 1271 aa6.79□□□□□ -1.32
HMGB1P11-201ENST00000413899 EPXP11678 715 aa6.79□□□□□ -1.32
HMGB1P11-201ENST00000413899 MFAP1P55081 439 aaKnown RBP6.79□□□□□ -1.32
HMGB1P11-201ENST00000413899 PLAURQ03405 335 aa6.79□□□□□ -1.32
HMGB1P11-201ENST00000413899 FMR1Q06787 632 aaKnown RBP eCLIP6.79□□□□□ -1.32
HMGB1P11-201ENST00000413899 PMEPA1Q969W9 287 aa6.79□□□□□ -1.32
HMGB1P11-201ENST00000413899 DNAJC25Q9H1X3 360 aa6.79□□□□□ -1.32
HMGB1P11-201ENST00000413899 CHRDQ9H2X0 955 aa6.79□□□□□ -1.32
HMGB1P11-201ENST00000413899 ZFYVE28Q9HCC9 887 aa6.79□□□□□ -1.32
HMGB1P11-201ENST00000413899 CNTN3Q9P232 1028 aa6.79□□□□□ -1.32
HMGB1P11-201ENST00000413899 ELOA3CA0A087WX78 387 aaPredicted RBP6.78□□□□□ -1.32
HMGB1P11-201ENST00000413899 ANKRD33BA6NCL7 494 aa6.78□□□□□ -1.32
HMGB1P11-201ENST00000413899 ELOA3DA6NLF2 546 aaPredicted RBP6.78□□□□□ -1.32
HMGB1P11-201ENST00000413899 ZBTB42B2RXF5 422 aa6.78□□□□□ -1.32
HMGB1P11-201ENST00000413899 PHACTR2O75167 634 aa6.78□□□□□ -1.32
HMGB1P11-201ENST00000413899 ADH7P40394 386 aa6.78□□□□□ -1.32
HMGB1P11-201ENST00000413899 PLCB3Q01970 1234 aa6.78□□□□□ -1.32
HMGB1P11-201ENST00000413899 ELOA3BQ3SY89 546 aa6.78□□□□□ -1.32
HMGB1P11-201ENST00000413899 LYPD4Q6UWN0 246 aa6.78□□□□□ -1.32
HMGB1P11-201ENST00000413899 C1orf229Q6ZS94 237 aaPredicted RBP6.78□□□□□ -1.32
HMGB1P11-201ENST00000413899 C1orf127Q8N9H9 656 aa6.78□□□□□ -1.32
HMGB1P11-201ENST00000413899 ELOA3Q8NG57 546 aa6.78□□□□□ -1.32
HMGB1P11-201ENST00000413899 NIF3L1Q9GZT8 377 aa6.78□□□□□ -1.32
HMGB1P11-201ENST00000413899 DNAJB12Q9NXW2 375 aaKnown RBP6.78□□□□□ -1.32
HMGB1P11-201ENST00000413899 FOXD3Q9UJU5 478 aaPredicted RBP6.78□□□□□ -1.32
HMGB1P11-201ENST00000413899 KIF4AO95239 1232 aa6.77□□□□□ -1.33
HMGB1P11-201ENST00000413899 CELA2BP08218 269 aaPredicted RBP6.77□□□□□ -1.33
HMGB1P11-201ENST00000413899 LORP23490 312 aaPredicted RBP6.77□□□□□ -1.33
HMGB1P11-201ENST00000413899 ZNF385CQ66K41 422 aaPredicted RBP6.77□□□□□ -1.33
HMGB1P11-201ENST00000413899 NPAS4Q8IUM7 802 aa6.77□□□□□ -1.33
HMGB1P11-201ENST00000413899 EDARADDQ8WWZ3 215 aa6.77□□□□□ -1.33
HMGB1P11-201ENST00000413899 UBE2OQ9C0C9 1292 aaKnown RBP6.77□□□□□ -1.33
HMGB1P11-201ENST00000413899 SLC6A14Q9UN76 642 aa6.77□□□□□ -1.33
HMGB1P11-201ENST00000413899 PHF20L1A8MW92 1017 aa6.76□□□□□ -1.33
HMGB1P11-201ENST00000413899 CYP2E1P05181 493 aaPredicted RBP6.76□□□□□ -1.33
HMGB1P11-201ENST00000413899 CES1P23141 567 aa6.76□□□□□ -1.33
HMGB1P11-201ENST00000413899 HYAL2Q12891 473 aa6.76□□□□□ -1.33
HMGB1P11-201ENST00000413899 WHAMMQ8TF30 809 aa6.76□□□□□ -1.33
HMGB1P11-201ENST00000413899 CSRNP1Q96S65 589 aa6.76□□□□□ -1.33
HMGB1P11-201ENST00000413899 SALL4Q9UJQ4 1053 aa6.76□□□□□ -1.33
HMGB1P11-201ENST00000413899 EIF1AYO14602 144 aaKnown RBP6.75□□□□□ -1.33
HMGB1P11-201ENST00000413899 CPNE3O75131 537 aaKnown RBP6.75□□□□□ -1.33
HMGB1P11-201ENST00000413899 ALAS2P22557 587 aa6.75□□□□□ -1.33
HMGB1P11-201ENST00000413899 ORC1Q13415 861 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms